BLASTX nr result

ID: Cocculus22_contig00004523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004523
         (751 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234406.1| PREDICTED: uncharacterized protein LOC101254...    77   8e-12
ref|XP_006353868.1| PREDICTED: uncharacterized protein LOC102602...    70   6e-10
gb|EYU19555.1| hypothetical protein MIMGU_mgv1a000921mg [Mimulus...    60   1e-06
emb|CBI22707.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_006374616.1| hypothetical protein POPTR_0015s12970g [Popu...    59   2e-06
ref|XP_002321923.2| hypothetical protein POPTR_0015s12970g [Popu...    59   2e-06
ref|XP_007038721.1| Chloroplast thylakoid membrane, putative iso...    57   9e-06

>ref|XP_004234406.1| PREDICTED: uncharacterized protein LOC101254456 [Solanum
           lycopersicum]
          Length = 943

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           M+S+ TT CPNSFQL L F+ R+ S +F                      S + GG    
Sbjct: 1   MSSLTTTWCPNSFQLRLAFRSRKPSAVF-AGMRVGKLDYRGVRLVSITMNSVSNGG---V 56

Query: 382 RKKNSGDSWMNSDASGDGFSGWFGANS----EGSQGKRXXXXXXXXXXXXXXXXXXXXXX 549
            K ++G   +NS AS DGFSGW GA+       SQGK+                      
Sbjct: 57  EKTSAGG--VNSTASADGFSGWSGADGAEKPSDSQGKKSIAGMVGAGAAGIILVSGLTFA 114

Query: 550 XXSLRKRSASGPNQHMESLTSQQEVLLASDGQKDTVDQ---VGSNDSTAVLDDECLQNDL 720
             S+ +RS++G  Q ME LT+Q+E+ + SD   DTV +   +G N+      +E     +
Sbjct: 115 ALSISRRSSTGIKQQMEPLTAQEEMSIDSDNHNDTVQEEKALGDNEFKDNSGEELEAGRI 174

Query: 721 ENDT 732
             DT
Sbjct: 175 SEDT 178


>ref|XP_006353868.1| PREDICTED: uncharacterized protein LOC102602745 isoform X1 [Solanum
           tuberosum]
          Length = 943

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           M+S+ TT CPNSFQL L F+ ++   +F                      S + GG    
Sbjct: 1   MSSLTTTWCPNSFQLRLAFRSKKPLAVF-AGMRVGKLDYRGVRLVSITMNSVSNGG---V 56

Query: 382 RKKNSGDSWMNSDASGDGFSGWFGANS----EGSQGKRXXXXXXXXXXXXXXXXXXXXXX 549
            K ++G   +NS AS DGFSGW GA+       SQGK+                      
Sbjct: 57  EKTSAGG--VNSTASADGFSGWSGADGAEKPSDSQGKKSIAGMVGAGAAGIILVSGLTFA 114

Query: 550 XXSLRKRSASGPNQHMESLTSQQEVLLASDGQKDTVDQ---VGSNDSTAVLDDECLQNDL 720
             S+ +RS++   Q ME LT+Q+E+ + SD   DTV +   +G N+      +E   + +
Sbjct: 115 ALSISRRSSTRIKQQMEPLTTQEEMSIDSDNHNDTVQEENVLGDNEFKDNSGEEFQASRI 174

Query: 721 ENDT 732
             DT
Sbjct: 175 SEDT 178


>gb|EYU19555.1| hypothetical protein MIMGU_mgv1a000921mg [Mimulus guttatus]
          Length = 942

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 4/173 (2%)
 Frame = +1

Query: 217 TTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEERKKNS 396
           TT CP+SFQL L    R+    F+                     SA  G  G E++ + 
Sbjct: 8   TTFCPSSFQLKLALGSRKYPSTFVYTRSLKVGRRSVNFVPVVVRSSAVNG-KGLEKRSSG 66

Query: 397 GDSWMNSDASGDGFSGWFGANSEGSQG----KRXXXXXXXXXXXXXXXXXXXXXXXXSLR 564
             SW N ++S D FSGW  A+SE + G    K+                        S+ 
Sbjct: 67  NSSWSNLNSSADDFSGWSNADSEPNSGDPKPKQSLIGILGAGAVGIVLVAGLTFAALSIS 126

Query: 565 KRSASGPNQHMESLTSQQEVLLASDGQKDTVDQVGSNDSTAVLDDECLQNDLE 723
            R  S   + +E LT++QE  L+SD  ++ V++  + D      DE L+N  E
Sbjct: 127 NRGKSRVKE-LEPLTTEQEKSLSSDNNQNQVEEEKNGDK-----DEKLENGSE 173


>emb|CBI22707.3| unnamed protein product [Vitis vinifera]
          Length = 1040

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           MAS+ T   P+SFQL   F+CRR+  +F+                     S    G+G  
Sbjct: 1   MASVTTNWSPSSFQLRFSFQCRRSPAVFVRTHVRKLDRQVRVL-------SIAGDGNGVG 53

Query: 382 RKKNSGDSWMNSDASGDGFSGWFGANSE----GSQGKRXXXXXXXXXXXXXXXXXXXXXX 549
           R ++ G+SW++S++ GD  SGW G++       SQ KR                      
Sbjct: 54  RHRD-GNSWISSESKGDDLSGWSGSDGSEQYGKSQKKRWPGGMVGAGVAGVVLVAGLSFA 112

Query: 550 XXSLRKRSASGPNQHMESLTSQQE 621
             SL K++ S P + ME++T Q E
Sbjct: 113 AFSLSKQNPSRPEKQMEAMTIQME 136


>ref|XP_006374616.1| hypothetical protein POPTR_0015s12970g [Populus trichocarpa]
           gi|550322608|gb|ERP52413.1| hypothetical protein
           POPTR_0015s12970g [Populus trichocarpa]
          Length = 1004

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/185 (26%), Positives = 70/185 (37%), Gaps = 5/185 (2%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           ++SM  T  P S QL L   C    +                       GS       + 
Sbjct: 2   VSSMAATCSPTSLQLRLAMNCHNRRI------SPPTQTRPWMRNKEVGSGSFRFLFLPQN 55

Query: 382 RKKNSGDSWMNSDASGDGFSGWFGANSEGSQG-----KRXXXXXXXXXXXXXXXXXXXXX 546
            ++  G SW+ S ++ D F+GW  ++ +  Q      K+                     
Sbjct: 56  ERRFDGGSWIGSSSAADNFAGWSDSDHDSDQSIENQRKKWLKGIVGAGVAGVILFAGLTF 115

Query: 547 XXXSLRKRSASGPNQHMESLTSQQEVLLASDGQKDTVDQVGSNDSTAVLDDECLQNDLEN 726
              SL K S S P QHME  T+QQEV LASD + D V++  S D           +DLE+
Sbjct: 116 AALSLSKWSISRPKQHMEPFTTQQEVSLASDKEDDKVEESKSEDRN--------DSDLES 167

Query: 727 DTALQ 741
            T +Q
Sbjct: 168 KTDIQ 172


>ref|XP_002321923.2| hypothetical protein POPTR_0015s12970g [Populus trichocarpa]
           gi|550322607|gb|EEF06050.2| hypothetical protein
           POPTR_0015s12970g [Populus trichocarpa]
          Length = 984

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/185 (26%), Positives = 70/185 (37%), Gaps = 5/185 (2%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           ++SM  T  P S QL L   C    +                       GS       + 
Sbjct: 2   VSSMAATCSPTSLQLRLAMNCHNRRI------SPPTQTRPWMRNKEVGSGSFRFLFLPQN 55

Query: 382 RKKNSGDSWMNSDASGDGFSGWFGANSEGSQG-----KRXXXXXXXXXXXXXXXXXXXXX 546
            ++  G SW+ S ++ D F+GW  ++ +  Q      K+                     
Sbjct: 56  ERRFDGGSWIGSSSAADNFAGWSDSDHDSDQSIENQRKKWLKGIVGAGVAGVILFAGLTF 115

Query: 547 XXXSLRKRSASGPNQHMESLTSQQEVLLASDGQKDTVDQVGSNDSTAVLDDECLQNDLEN 726
              SL K S S P QHME  T+QQEV LASD + D V++  S D           +DLE+
Sbjct: 116 AALSLSKWSISRPKQHMEPFTTQQEVSLASDKEDDKVEESKSEDRN--------DSDLES 167

Query: 727 DTALQ 741
            T +Q
Sbjct: 168 KTDIQ 172


>ref|XP_007038721.1| Chloroplast thylakoid membrane, putative isoform 2 [Theobroma
           cacao] gi|508775966|gb|EOY23222.1| Chloroplast thylakoid
           membrane, putative isoform 2 [Theobroma cacao]
          Length = 691

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 54/189 (28%), Positives = 73/189 (38%), Gaps = 6/189 (3%)
 Frame = +1

Query: 202 MASMRTTSCPNSFQLLLGFKCRRASLIFIXXXXXXXXXXXXXXXXXXXXGSATRGGDGEE 381
           MAS   T  P+S QL L  +CR      +                      + R   G E
Sbjct: 1   MASTTATWSPSSPQLRLALRCRNCKESGVVFVRARTGKLDCSSVRLLSVSRSRR--KGLE 58

Query: 382 RKKNSGDSWMNSD--ASGDGFSGWFGAN----SEGSQGKRXXXXXXXXXXXXXXXXXXXX 543
           R++N G  W+ SD  A  D FSGW  ++    S  S+                       
Sbjct: 59  RRRN-GALWIVSDSTAGSDTFSGWSDSDTLEDSVDSKSNGWFGGIMGAGSAGLVLVAGLS 117

Query: 544 XXXXSLRKRSASGPNQHMESLTSQQEVLLASDGQKDTVDQVGSNDSTAVLDDECLQNDLE 723
               SL  RS S P Q ++ LT+QQEV LASD + D ++                  + E
Sbjct: 118 FAAMSLSNRSTSRPKQQLQPLTTQQEVSLASDNESDKIE------------------ENE 159

Query: 724 NDTALQVHP 750
           ++TALQVHP
Sbjct: 160 SETALQVHP 168


Top