BLASTX nr result
ID: Cocculus22_contig00004481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004481
(1238 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containi... 325 3e-86
ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containi... 325 3e-86
ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi... 325 3e-86
ref|XP_007043123.1| Pentatricopeptide repeat superfamily protein... 323 1e-85
ref|XP_006422375.1| hypothetical protein CICLE_v10028759mg [Citr... 322 2e-85
gb|EXB40453.1| hypothetical protein L484_013756 [Morus notabilis] 321 4e-85
ref|XP_006342489.1| PREDICTED: pentatricopeptide repeat-containi... 319 1e-84
emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera] 318 2e-84
ref|XP_006573589.1| PREDICTED: pentatricopeptide repeat-containi... 318 4e-84
ref|XP_006573588.1| PREDICTED: pentatricopeptide repeat-containi... 318 4e-84
ref|XP_003516576.2| PREDICTED: pentatricopeptide repeat-containi... 318 4e-84
ref|XP_006486551.1| PREDICTED: pentatricopeptide repeat-containi... 317 7e-84
ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containi... 317 9e-84
gb|EYU32378.1| hypothetical protein MIMGU_mgv1a026042mg, partial... 311 3e-82
ref|XP_007156913.1| hypothetical protein PHAVU_002G027800g [Phas... 310 6e-82
ref|XP_004512018.1| PREDICTED: pentatricopeptide repeat-containi... 310 1e-81
ref|XP_002514391.1| pentatricopeptide repeat-containing protein,... 302 2e-79
gb|AFK36371.1| unknown [Lotus japonicus] 298 4e-78
ref|XP_002868835.1| pentatricopeptide repeat-containing protein ... 297 6e-78
ref|XP_006384881.1| hypothetical protein POPTR_0004s21920g [Popu... 296 9e-78
>ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X2 [Glycine max]
Length = 395
Score = 325 bits (832), Expect = 3e-86
Identities = 165/246 (67%), Positives = 195/246 (79%), Gaps = 7/246 (2%)
Frame = +2
Query: 332 NRTLGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PP 490
N + + RD +S D FL KFKL ++K N +K E +++P+ P P
Sbjct: 150 NTNVAKTNRDAGQSGDSFLNKFKLGFDDKTVNLSEVAASKQSEEAKRSNPNQPAQESMPQ 209
Query: 491 EADEIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGF 670
+ADEIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFGLMREKGTIPE+VIYTAVVEG+
Sbjct: 210 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 269
Query: 671 CKAHKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNV 850
KAHK DDAKRIFRKMQ++G+SPNAFSY VLIQGLYK RL DA +FC+EM+EAGHSPNV
Sbjct: 270 TKAHKADDAKRIFRKMQSSGVSPNAFSYMVLIQGLYKCSRLHDAFEFCVEMLEAGHSPNV 329
Query: 851 VTFAGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKK 1030
TF GLVD FC EKGVEEA++ IK LT+KGF+VN+KAVR++LDKK PFSP VWEA+FGKK
Sbjct: 330 TTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFSPSVWEAIFGKK 389
Query: 1031 VSHRLF 1048
R F
Sbjct: 390 APQRPF 395
>ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform 1 [Solanum lycopersicum]
gi|460415472|ref|XP_004253082.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g38150-like isoform 2 [Solanum lycopersicum]
Length = 340
Score = 325 bits (832), Expect = 3e-86
Identities = 160/235 (68%), Positives = 192/235 (81%), Gaps = 3/235 (1%)
Frame = +2
Query: 347 EEQRDDESMDDFLEKFKL---RNEKLQNTPPDIPNKTPETKAQTSPDLPPPEADEIFRKM 517
E Q + +DFL++F+L R E+ NT P ++ + +P PP +ADEIF+KM
Sbjct: 104 ESQMKSQDSEDFLKRFQLGFDRKEENPNTNPKAESR--DCPVSEAPPAPPEDADEIFKKM 161
Query: 518 KETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDA 697
KETGLIPNAV+MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVV+GFCKA KFDDA
Sbjct: 162 KETGLIPNAVAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDA 221
Query: 698 KRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDI 877
RIFRKMQ NGI PNAFSY ++I+GL +GKRL+DA++FC+EM+EAGHSPNVVTF LVD
Sbjct: 222 VRIFRKMQGNGIIPNAFSYGIIIRGLSQGKRLDDALEFCLEMLEAGHSPNVVTFVTLVDG 281
Query: 878 FCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHR 1042
FC EK +E+A+NMIK + +KGFIV+DKAVRE+LDKKGPF P+VWEA+ GKK S R
Sbjct: 282 FCKEKSLEDAQNMIKTVRQKGFIVDDKAVREFLDKKGPFLPVVWEAILGKKASQR 336
>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X1 [Glycine max]
Length = 388
Score = 325 bits (832), Expect = 3e-86
Identities = 165/246 (67%), Positives = 195/246 (79%), Gaps = 7/246 (2%)
Frame = +2
Query: 332 NRTLGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PP 490
N + + RD +S D FL KFKL ++K N +K E +++P+ P P
Sbjct: 143 NTNVAKTNRDAGQSGDSFLNKFKLGFDDKTVNLSEVAASKQSEEAKRSNPNQPAQESMPQ 202
Query: 491 EADEIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGF 670
+ADEIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFGLMREKGTIPE+VIYTAVVEG+
Sbjct: 203 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 262
Query: 671 CKAHKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNV 850
KAHK DDAKRIFRKMQ++G+SPNAFSY VLIQGLYK RL DA +FC+EM+EAGHSPNV
Sbjct: 263 TKAHKADDAKRIFRKMQSSGVSPNAFSYMVLIQGLYKCSRLHDAFEFCVEMLEAGHSPNV 322
Query: 851 VTFAGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKK 1030
TF GLVD FC EKGVEEA++ IK LT+KGF+VN+KAVR++LDKK PFSP VWEA+FGKK
Sbjct: 323 TTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFSPSVWEAIFGKK 382
Query: 1031 VSHRLF 1048
R F
Sbjct: 383 APQRPF 388
>ref|XP_007043123.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508707058|gb|EOX98954.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 345
Score = 323 bits (827), Expect = 1e-85
Identities = 156/235 (66%), Positives = 189/235 (80%), Gaps = 2/235 (0%)
Frame = +2
Query: 350 EQRDDESMDDFLEKFKLRNEKLQNTPPDIPNKTP--ETKAQTSPDLPPPEADEIFRKMKE 523
++ D +S ++FLEKFKL + + P K Q PP +ADEIF+KMKE
Sbjct: 111 KREDSQSDENFLEKFKLGLDNKRGKQPSDSEAAALLRRKEQEEKPSPPQDADEIFKKMKE 170
Query: 524 TGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKR 703
TGLIPNAV+MLDGLCKDGL+QEAMKLFG MREKGTIPEVVIYTAVV+GFCKAHK DDAKR
Sbjct: 171 TGLIPNAVAMLDGLCKDGLIQEAMKLFGSMREKGTIPEVVIYTAVVDGFCKAHKLDDAKR 230
Query: 704 IFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFC 883
IFRKMQ+ G++PN+FSY VLIQGLY+ +L+DA++FC+EM+EAGHSPNV TF GLVD C
Sbjct: 231 IFRKMQSKGVTPNSFSYIVLIQGLYRCNKLDDAIEFCLEMLEAGHSPNVTTFVGLVDGLC 290
Query: 884 GEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
EKGVEEA+++I L +KGF++NDKAVR++LDKK PFSPLVWEA+FGKK S + F
Sbjct: 291 KEKGVEEAQSVIGTLKQKGFVLNDKAVRQFLDKKAPFSPLVWEAIFGKKPSQKTF 345
>ref|XP_006422375.1| hypothetical protein CICLE_v10028759mg [Citrus clementina]
gi|557524309|gb|ESR35615.1| hypothetical protein
CICLE_v10028759mg [Citrus clementina]
Length = 344
Score = 322 bits (825), Expect = 2e-85
Identities = 177/337 (52%), Positives = 217/337 (64%), Gaps = 6/337 (1%)
Frame = +2
Query: 56 SPPDPIPNRPLRGDKRSDLRGHEAIDDRTKQSXXXXXXXXXXXXXXXXXXXXXXXXXDFT 235
+PP+PIP+RPLRG++ FT
Sbjct: 54 NPPEPIPDRPLRGER------------------------------------------PFT 71
Query: 236 TVGKSYSDAIFDNIGKTTQSYQXXXXXXXXXXNRTLGEEQRDDESMDDFLEKFKLRNEKL 415
++ F Q Q NR + +S ++FL++FKL +K
Sbjct: 72 NQNQNRRS--FQPRFNNYQQQQRPQQQSFQSPNRPRPKSPDGVQSDENFLDQFKLAIDKK 129
Query: 416 QNTPPDIPNKTPETKAQTSPDL------PPPEADEIFRKMKETGLIPNAVSMLDGLCKDG 577
+ P N++ + + P+ PP EADEIF+KMKETGLIPNAV+MLDGLCKDG
Sbjct: 130 PDNPQQ--NESLGERQEQKPNRNEPISEPPQEADEIFKKMKETGLIPNAVAMLDGLCKDG 187
Query: 578 LVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQNNGISPNAFSYT 757
L+QEAMKLFGLMREKGTIPEVVIYTAVV+GFCKA KFDDAKRIFRKMQ+NGI+PNAFSY
Sbjct: 188 LIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYN 247
Query: 758 VLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEEAENMIKKLTEK 937
+LIQGLYK +LE+AV++CIEM+EAGHSPNV TF GLVD C EKGVE+A+++I L EK
Sbjct: 248 LLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCREKGVEKAQSVIATLKEK 307
Query: 938 GFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
GF+VNDKAVRE+LDKK PFS VWEA+FGKK S + F
Sbjct: 308 GFLVNDKAVREFLDKKAPFSSSVWEAIFGKKTSQKPF 344
>gb|EXB40453.1| hypothetical protein L484_013756 [Morus notabilis]
Length = 306
Score = 321 bits (823), Expect = 4e-85
Identities = 159/227 (70%), Positives = 184/227 (81%), Gaps = 2/227 (0%)
Frame = +2
Query: 374 DDFLEKFKLRNEKLQNTPPDIPNKTPETKAQTSPDLPPP--EADEIFRKMKETGLIPNAV 547
D FLEKFKL + ++ + P + P PPP +ADEIF+KMKETGLIPNAV
Sbjct: 80 DSFLEKFKLGLDSSKDGMQEKPRREAARPKPPLPQPPPPPEDADEIFKKMKETGLIPNAV 139
Query: 548 SMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQNN 727
+MLDGLCKDGLVQEAMKLFGLM+EKGTIPEVVIYTAVV+GFCKA K DDA RIFRKMQ+N
Sbjct: 140 AMLDGLCKDGLVQEAMKLFGLMKEKGTIPEVVIYTAVVDGFCKAQKLDDAVRIFRKMQSN 199
Query: 728 GISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEEA 907
GI PNAFSY+VL+QGL GKRLED ++FC+EM+EAGHSPNV TF GLVD C EKGVEEA
Sbjct: 200 GIEPNAFSYSVLVQGLCGGKRLEDGLEFCVEMLEAGHSPNVATFVGLVDGLCEEKGVEEA 259
Query: 908 ENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
+ +I KL +KGF++N+KAVRE+LDKK FSP VWEA+FGKK S RLF
Sbjct: 260 QGVIGKLRDKGFLLNEKAVREFLDKKASFSPSVWEAIFGKKASQRLF 306
>ref|XP_006342489.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
[Solanum tuberosum]
Length = 354
Score = 319 bits (818), Expect = 1e-84
Identities = 160/235 (68%), Positives = 190/235 (80%), Gaps = 5/235 (2%)
Frame = +2
Query: 353 QRDDESMDDFLEKFKL---RNEKLQNTPPDIPNK--TPETKAQTSPDLPPPEADEIFRKM 517
Q + +DFL++F+L R E+ NT P + K + ++ +P PP +ADEIF+KM
Sbjct: 116 QMKSQDSEDFLKRFQLGFDRKEENPNTNPALHPKGESSDSPVSEAPPAPPEDADEIFKKM 175
Query: 518 KETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDA 697
KETGLIPNAV+MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVV+GF KA KFDDA
Sbjct: 176 KETGLIPNAVAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVDGFFKAQKFDDA 235
Query: 698 KRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDI 877
RIFRKMQ NGI PNAFSY +LI+GL +G RL+DA +FC+EM+EAGHSPNVVTF LVD
Sbjct: 236 VRIFRKMQGNGIIPNAFSYGILIRGLSQGNRLDDAFEFCLEMLEAGHSPNVVTFVTLVDG 295
Query: 878 FCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHR 1042
FC EK +E+A+NMIK + +KGFIV+DKAVREYLDKKGPF P+VWEA+ GKK S R
Sbjct: 296 FCKEKSLEDAQNMIKTVRQKGFIVDDKAVREYLDKKGPFLPVVWEAILGKKASQR 350
>emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
Length = 381
Score = 318 bits (816), Expect = 2e-84
Identities = 163/228 (71%), Positives = 183/228 (80%), Gaps = 3/228 (1%)
Frame = +2
Query: 374 DDFLEKFKL---RNEKLQNTPPDIPNKTPETKAQTSPDLPPPEADEIFRKMKETGLIPNA 544
D FLE+FKL + E+ Q + P++ E A + PP ADEIFRKMKE+GLIPNA
Sbjct: 156 DGFLERFKLGVQKKERPQESAAAQPSR--EQDANHGKEQPPQNADEIFRKMKESGLIPNA 213
Query: 545 VSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQN 724
V+MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA + DDA RIFRKMQN
Sbjct: 214 VAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQN 273
Query: 725 NGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEE 904
NGISPNAFSYTVLI+G+YKG RL+ AVDFC+EM+EAGHSPNV T L+ FC EKGVEE
Sbjct: 274 NGISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEE 333
Query: 905 AENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
A+N+I L +KG V+DKAVREYLDKKGP SPLVWEA FGKK R F
Sbjct: 334 AKNVIVTLKQKGLFVDDKAVREYLDKKGPQSPLVWEAFFGKKSPQRSF 381
>ref|XP_006573589.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X3 [Glycine max] gi|571435834|ref|XP_006573590.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X4 [Glycine max]
Length = 403
Score = 318 bits (814), Expect = 4e-84
Identities = 163/243 (67%), Positives = 193/243 (79%), Gaps = 7/243 (2%)
Frame = +2
Query: 341 LGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PPEAD 499
+ E RD +S FL+KFKL ++K N +K E +++P+ P P +A+
Sbjct: 161 VAETNRDVGKSGGSFLDKFKLGFDDKTVNLSEVAASKQSEEAKRSNPNQPAQESMPQDAN 220
Query: 500 EIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA 679
EIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFGL+REKGTIPE+VIYTAVVEG+ KA
Sbjct: 221 EIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLIREKGTIPEIVIYTAVVEGYTKA 280
Query: 680 HKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTF 859
HK DDAKRIFRKMQ++GISPNAFSYTVLIQGLYK RL DA +FC+EM+EAGHSPNV F
Sbjct: 281 HKADDAKRIFRKMQSSGISPNAFSYTVLIQGLYKCNRLHDAFEFCVEMLEAGHSPNVTAF 340
Query: 860 AGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSH 1039
GLVD FC EKGVEEA++ IK LTEKGF+VN+KAV ++LDKK PFSP VWEA+FGKK
Sbjct: 341 VGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQFLDKKAPFSPSVWEAIFGKKAPQ 400
Query: 1040 RLF 1048
R F
Sbjct: 401 RPF 403
>ref|XP_006573588.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X2 [Glycine max]
Length = 431
Score = 318 bits (814), Expect = 4e-84
Identities = 163/243 (67%), Positives = 193/243 (79%), Gaps = 7/243 (2%)
Frame = +2
Query: 341 LGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PPEAD 499
+ E RD +S FL+KFKL ++K N +K E +++P+ P P +A+
Sbjct: 189 VAETNRDVGKSGGSFLDKFKLGFDDKTVNLSEVAASKQSEEAKRSNPNQPAQESMPQDAN 248
Query: 500 EIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA 679
EIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFGL+REKGTIPE+VIYTAVVEG+ KA
Sbjct: 249 EIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLIREKGTIPEIVIYTAVVEGYTKA 308
Query: 680 HKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTF 859
HK DDAKRIFRKMQ++GISPNAFSYTVLIQGLYK RL DA +FC+EM+EAGHSPNV F
Sbjct: 309 HKADDAKRIFRKMQSSGISPNAFSYTVLIQGLYKCNRLHDAFEFCVEMLEAGHSPNVTAF 368
Query: 860 AGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSH 1039
GLVD FC EKGVEEA++ IK LTEKGF+VN+KAV ++LDKK PFSP VWEA+FGKK
Sbjct: 369 VGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQFLDKKAPFSPSVWEAIFGKKAPQ 428
Query: 1040 RLF 1048
R F
Sbjct: 429 RPF 431
>ref|XP_003516576.2| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X1 [Glycine max]
Length = 457
Score = 318 bits (814), Expect = 4e-84
Identities = 163/243 (67%), Positives = 193/243 (79%), Gaps = 7/243 (2%)
Frame = +2
Query: 341 LGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PPEAD 499
+ E RD +S FL+KFKL ++K N +K E +++P+ P P +A+
Sbjct: 215 VAETNRDVGKSGGSFLDKFKLGFDDKTVNLSEVAASKQSEEAKRSNPNQPAQESMPQDAN 274
Query: 500 EIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA 679
EIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFGL+REKGTIPE+VIYTAVVEG+ KA
Sbjct: 275 EIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLIREKGTIPEIVIYTAVVEGYTKA 334
Query: 680 HKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTF 859
HK DDAKRIFRKMQ++GISPNAFSYTVLIQGLYK RL DA +FC+EM+EAGHSPNV F
Sbjct: 335 HKADDAKRIFRKMQSSGISPNAFSYTVLIQGLYKCNRLHDAFEFCVEMLEAGHSPNVTAF 394
Query: 860 AGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSH 1039
GLVD FC EKGVEEA++ IK LTEKGF+VN+KAV ++LDKK PFSP VWEA+FGKK
Sbjct: 395 VGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQFLDKKAPFSPSVWEAIFGKKAPQ 454
Query: 1040 RLF 1048
R F
Sbjct: 455 RPF 457
>ref|XP_006486551.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
[Citrus sinensis]
Length = 387
Score = 317 bits (812), Expect = 7e-84
Identities = 158/234 (67%), Positives = 190/234 (81%), Gaps = 6/234 (2%)
Frame = +2
Query: 365 ESMDDFLEKFKLRNEKLQNTPPDIPNKTPETKAQTSPDL------PPPEADEIFRKMKET 526
+S ++FL++FKL +K P N++ + + P+ PP EADEIF+KMKET
Sbjct: 156 QSDENFLDQFKLAIDKKPGNPQQ--NESLGQRQEQKPNRNEPISEPPQEADEIFKKMKET 213
Query: 527 GLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRI 706
GLIPNAV+MLDGLCKDGL+QEAMKLFGLMREKGTIPEVVIYTAVV+GFCKA KFDDAKRI
Sbjct: 214 GLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRI 273
Query: 707 FRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCG 886
FRKMQ+NGI+PNAFSY +LIQGLYK +LE+AV++CIEM+EAGHSPNV TF GLVD C
Sbjct: 274 FRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCR 333
Query: 887 EKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
E+GVE+A+++I L EKGF+VNDKAVRE+LDKK PFS VWEA+FGKK + F
Sbjct: 334 ERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEAIFGKKTLQKPF 387
>ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
[Vitis vinifera]
Length = 380
Score = 317 bits (811), Expect = 9e-84
Identities = 162/228 (71%), Positives = 183/228 (80%), Gaps = 3/228 (1%)
Frame = +2
Query: 374 DDFLEKFKL---RNEKLQNTPPDIPNKTPETKAQTSPDLPPPEADEIFRKMKETGLIPNA 544
D FLE+FKL + E+ Q + P++ E A + PP ADEIFRKMKE+GLIPNA
Sbjct: 155 DGFLERFKLGVQKKERPQESAAAQPSR--EQDANHGKEQPPQNADEIFRKMKESGLIPNA 212
Query: 545 VSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQN 724
V+MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA + +DA RIFRKMQN
Sbjct: 213 VAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLNDAVRIFRKMQN 272
Query: 725 NGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEE 904
NGISPNAFSYTVLI+G+YKG RL+ AVDFC+EM+EAGHSPNV T L+ FC EKGVEE
Sbjct: 273 NGISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEE 332
Query: 905 AENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
A+N+I L +KG V+DKAVREYLDKKGP SPLVWEA FGKK R F
Sbjct: 333 AKNVIVTLKQKGLFVDDKAVREYLDKKGPQSPLVWEAFFGKKSPQRSF 380
>gb|EYU32378.1| hypothetical protein MIMGU_mgv1a026042mg, partial [Mimulus guttatus]
Length = 269
Score = 311 bits (798), Expect = 3e-82
Identities = 156/229 (68%), Positives = 181/229 (79%), Gaps = 3/229 (1%)
Frame = +2
Query: 365 ESMDDFLEKFKLR-NEKLQNTPPDIPNKT--PETKAQTSPDLPPPEADEIFRKMKETGLI 535
E+ DFLEKFKL + K + D NK+ PE K P PP +ADEIF+KMKETGLI
Sbjct: 38 ETDADFLEKFKLGFDRKSETLTTDSINKSIQPEKKENVEPISPPEDADEIFKKMKETGLI 97
Query: 536 PNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRK 715
PNAV+MLDGLCKDGLVQEAMKLFGLMREKGTIPEVV+YTAVV+GFCKAHK +DA RIF+K
Sbjct: 98 PNAVAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVVYTAVVDGFCKAHKLEDAVRIFKK 157
Query: 716 MQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKG 895
MQ+NGI PNAFSY VLI+GL G RL+D F IEM+EAGHSPN+ TF GLVD++C EK
Sbjct: 158 MQSNGIVPNAFSYQVLIRGLCSGNRLDDVYGFTIEMLEAGHSPNLATFTGLVDVYCREKD 217
Query: 896 VEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHR 1042
+EEA+N+IK + KGF +KAVRE+LDKKGPF PLVWEA+ G K S R
Sbjct: 218 LEEAQNVIKAMRHKGFFFEEKAVREHLDKKGPFLPLVWEAILGNKASKR 266
>ref|XP_007156913.1| hypothetical protein PHAVU_002G027800g [Phaseolus vulgaris]
gi|593787750|ref|XP_007156914.1| hypothetical protein
PHAVU_002G027800g [Phaseolus vulgaris]
gi|561030328|gb|ESW28907.1| hypothetical protein
PHAVU_002G027800g [Phaseolus vulgaris]
gi|561030329|gb|ESW28908.1| hypothetical protein
PHAVU_002G027800g [Phaseolus vulgaris]
Length = 451
Score = 310 bits (795), Expect = 6e-82
Identities = 158/243 (65%), Positives = 192/243 (79%), Gaps = 7/243 (2%)
Frame = +2
Query: 341 LGEEQRD-DESMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PPEAD 499
+ + RD ++S D FL+KFKL ++K N +K E +++PD P +AD
Sbjct: 209 VADTNRDFEQSGDSFLDKFKLAFDDKTVNLSEVAASKQSEEAKRSNPDQQAQEPVPQDAD 268
Query: 500 EIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKA 679
EIF+KMKETGLIPNAV+MLDGLCKDGLVQEA+KLF LMREKGTIPE+VIYTAVVEG+ KA
Sbjct: 269 EIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFALMREKGTIPEIVIYTAVVEGYTKA 328
Query: 680 HKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTF 859
K DDAKRIFRKMQ++GISPNAFSYTV++QGLYK +RL+DA +FC+EM+EAGHSPNV TF
Sbjct: 329 DKADDAKRIFRKMQSSGISPNAFSYTVIVQGLYKCRRLQDAFEFCVEMLEAGHSPNVTTF 388
Query: 860 AGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSH 1039
LVD FC EKGVEEA++ +K LT KGF ++KAVR++LDKK PFSP VWEA+FGKK
Sbjct: 389 VSLVDGFCKEKGVEEAKDAVKTLTGKGFAFDEKAVRQFLDKKTPFSPSVWEAIFGKKAPQ 448
Query: 1040 RLF 1048
R F
Sbjct: 449 RPF 451
>ref|XP_004512018.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like
isoform X1 [Cicer arietinum]
gi|502161087|ref|XP_004512019.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g38150-like isoform X2 [Cicer arietinum]
Length = 371
Score = 310 bits (793), Expect = 1e-81
Identities = 162/245 (66%), Positives = 191/245 (77%), Gaps = 7/245 (2%)
Frame = +2
Query: 335 RTLGEEQRDDESM-DDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLP-----PPE 493
R + E RD + D FL+KFKL ++K+ N N E + D P P +
Sbjct: 127 RNVAEVSRDAGQLGDSFLDKFKLGFDDKVGNHSEVESNGQTEGSRASDTDQPAQEPMPQD 186
Query: 494 ADEIFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFC 673
ADEIF+KMKETGLIPNAV+MLDGLCKDG VQEA+KLFGLMREKGTIPE+VIYTAVVEG+
Sbjct: 187 ADEIFKKMKETGLIPNAVAMLDGLCKDGNVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 246
Query: 674 KAHKFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVV 853
KAHK DDA RIFRKMQ+NGISPNA+S+TVLIQGLYK RL+DA++FC+EM+EAG+S NV
Sbjct: 247 KAHKADDAIRIFRKMQSNGISPNAYSFTVLIQGLYKCSRLQDALEFCVEMLEAGYSLNVT 306
Query: 854 TFAGLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKV 1033
TF G+VD FC E GVEEA+ +IK LTEKGF ++KAVRE+LDKK PFSP +WEAVFGKKV
Sbjct: 307 TFVGVVDGFCKEDGVEEAKGVIKTLTEKGFAYDEKAVREFLDKKAPFSPSIWEAVFGKKV 366
Query: 1034 SHRLF 1048
S R F
Sbjct: 367 SQRPF 371
>ref|XP_002514391.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546488|gb|EEF47987.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 313
Score = 302 bits (774), Expect = 2e-79
Identities = 155/231 (67%), Positives = 183/231 (79%), Gaps = 4/231 (1%)
Frame = +2
Query: 368 SMDDFLEKFKL--RNEKLQNTPPDIPNKTP--ETKAQTSPDLPPPEADEIFRKMKETGLI 535
S DDFLEKFKL RN K P I N T E ++SP PPP+A++IF KMKETGLI
Sbjct: 84 SSDDFLEKFKLNKRNHK-DEIPHQINNHTSKDENINKSSPPPPPPDANDIFNKMKETGLI 142
Query: 536 PNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRK 715
PNAV+MLDGLCKDGLVQEAMKLFGLMR+KGTIPEVV+YTAVV+GFCKAHK DDAKRIF+K
Sbjct: 143 PNAVAMLDGLCKDGLVQEAMKLFGLMRQKGTIPEVVVYTAVVDGFCKAHKTDDAKRIFKK 202
Query: 716 MQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKG 895
M +NGI+PNAFSYTV IQGL K ++DAVDFC +M++AGHSPNV TF GLVD C EKG
Sbjct: 203 MIDNGITPNAFSYTVTIQGLCKCNAVDDAVDFCFQMLDAGHSPNVTTFVGLVDGLCREKG 262
Query: 896 VEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
V+EA+N+I+ L +KGF +N KA+RE+LDK P S + +A+FGKK S F
Sbjct: 263 VDEAQNVIEDLRKKGFYINGKAIREFLDKNAPLSSDLSQAIFGKKPSQMPF 313
>gb|AFK36371.1| unknown [Lotus japonicus]
Length = 372
Score = 298 bits (762), Expect = 4e-78
Identities = 151/228 (66%), Positives = 179/228 (78%), Gaps = 3/228 (1%)
Frame = +2
Query: 374 DDFLEKFKLRNEKLQNTPPDIP--NKTPETK-AQTSPDLPPPEADEIFRKMKETGLIPNA 544
D FL+KFKL + ++ N + E K A ++ P +ADEIF+KMKETGLIPNA
Sbjct: 145 DSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNA 204
Query: 545 VSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQN 724
V+MLDGLCKDGLVQEA+KLFGLMREKGTIPE+VIYTAVVEG+ KAHK DDAKRIFRKMQ+
Sbjct: 205 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 264
Query: 725 NGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEE 904
NGISPNAFSYTVL+QGL K RL+DA +FC+EM+EAGHSPN+ TF LVD F E+GV E
Sbjct: 265 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 324
Query: 905 AENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHRLF 1048
A+ I+ L EKGF+VN+KAV+ +LD K PFSP VWEA+FGKK F
Sbjct: 325 AKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFGKKAPQMPF 372
>ref|XP_002868835.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314671|gb|EFH45094.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 301
Score = 297 bits (761), Expect = 6e-78
Identities = 150/222 (67%), Positives = 176/222 (79%), Gaps = 1/222 (0%)
Frame = +2
Query: 368 SMDDFLEKFKLR-NEKLQNTPPDIPNKTPETKAQTSPDLPPPEADEIFRKMKETGLIPNA 544
S D FLE+FKL N+ Q TP P + P+ P LPP ++DEIF+KMKE GLIPNA
Sbjct: 81 SDDGFLEQFKLGVNQDSQETPK--PEQYPQ-----DPLLPPEDSDEIFKKMKEGGLIPNA 133
Query: 545 VSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAHKFDDAKRIFRKMQN 724
V+MLDGLCKDGLVQEAMKLFGLMR+KGTIPEVVIYTAVVEGFCKAHK +DAKRIFRKMQ
Sbjct: 134 VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEGFCKAHKIEDAKRIFRKMQT 193
Query: 725 NGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFAGLVDIFCGEKGVEE 904
NGI+PNAFSY VL+QGLY L+DAV FC EM+E+GHSPN+ TF GLVD C EKGVE+
Sbjct: 194 NGITPNAFSYGVLVQGLYNCNMLDDAVTFCCEMLESGHSPNIPTFVGLVDALCREKGVEQ 253
Query: 905 AENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKK 1030
A++ I L +KGF +N KAV+E++DK+ PF L WEA+F KK
Sbjct: 254 AQSAIDGLNQKGFALNVKAVKEFMDKRAPFPSLAWEAIFKKK 295
>ref|XP_006384881.1| hypothetical protein POPTR_0004s21920g [Populus trichocarpa]
gi|550341649|gb|ERP62678.1| hypothetical protein
POPTR_0004s21920g [Populus trichocarpa]
Length = 380
Score = 296 bits (759), Expect = 9e-78
Identities = 154/242 (63%), Positives = 178/242 (73%), Gaps = 15/242 (6%)
Frame = +2
Query: 368 SMDDFLEKFKLRNEKLQNTPPDIPNKTPETKAQTSPDLPPP---------------EADE 502
S D FL+KFKL + N D +TKA +P PPP +A++
Sbjct: 143 SDDAFLDKFKLHPDHNNNVNKDAA--AADTKAAAAP--PPPKNEQASSASTSEPSQDAEQ 198
Query: 503 IFRKMKETGLIPNAVSMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKAH 682
IF KMKETGLIPNAV+MLDGLCKDGLVQEA+KLFG MREKGTIPEVVIYTAVV+GFCKAH
Sbjct: 199 IFNKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGTMREKGTIPEVVIYTAVVDGFCKAH 258
Query: 683 KFDDAKRIFRKMQNNGISPNAFSYTVLIQGLYKGKRLEDAVDFCIEMIEAGHSPNVVTFA 862
K DDAKRIFRKMQ+NGI+PNAFSY VLIQGL K +DA+DFC EM+E GHSPNV TF
Sbjct: 259 KLDDAKRIFRKMQSNGITPNAFSYAVLIQGLSKCNLFDDAIDFCFEMLELGHSPNVTTFV 318
Query: 863 GLVDIFCGEKGVEEAENMIKKLTEKGFIVNDKAVREYLDKKGPFSPLVWEAVFGKKVSHR 1042
GL+D C EKGVEEA +I L +KGF V+DKAVR++LDK P S VW+A+FGKK SH+
Sbjct: 319 GLIDGLCREKGVEEARTVIGTLRQKGFHVHDKAVRDFLDKNKPLSSSVWDAIFGKKPSHK 378
Query: 1043 LF 1048
F
Sbjct: 379 PF 380