BLASTX nr result
ID: Cocculus22_contig00004356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004356
(301 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007206859.1| hypothetical protein PRUPE_ppa027172mg [Prun... 149 4e-34
ref|XP_007206713.1| hypothetical protein PRUPE_ppa024205mg [Prun... 149 5e-34
ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containi... 146 3e-33
gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis] 141 1e-31
ref|XP_007158349.1| hypothetical protein PHAVU_002G145200g [Phas... 134 2e-29
ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
emb|CBI40853.3| unnamed protein product [Vitis vinifera] 134 2e-29
ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago t... 130 2e-28
ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
ref|XP_004305608.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
emb|CBI20738.3| unnamed protein product [Vitis vinifera] 119 3e-25
emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera] 119 3e-25
ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelma... 117 2e-24
ref|XP_001775099.1| predicted protein [Physcomitrella patens] gi... 116 4e-24
gb|AEU08419.1| pentatricopeptide repeat protein [Atrichum undula... 115 8e-24
ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citr... 114 1e-23
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 114 1e-23
>ref|XP_007206859.1| hypothetical protein PRUPE_ppa027172mg [Prunus persica]
gi|462402501|gb|EMJ08058.1| hypothetical protein
PRUPE_ppa027172mg [Prunus persica]
Length = 650
Score = 149 bits (376), Expect = 4e-34
Identities = 72/99 (72%), Positives = 84/99 (84%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSH R+ EIN+ LE+L EK++ LGYVPD RFVLQ LDEE KKRSLYYHSEKLAI+F LL
Sbjct: 533 DLSHRRSREINETLEKLIEKVKLLGYVPDTRFVLQDLDEELKKRSLYYHSEKLAISFALL 592
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
N +T IRI+KNLRVCGDCH+WIKFV+KV+ +EIIAR
Sbjct: 593 VSSNKNTIIRIFKNLRVCGDCHSWIKFVTKVSSREIIAR 631
>ref|XP_007206713.1| hypothetical protein PRUPE_ppa024205mg [Prunus persica]
gi|462402355|gb|EMJ07912.1| hypothetical protein
PRUPE_ppa024205mg [Prunus persica]
Length = 577
Score = 149 bits (375), Expect = 5e-34
Identities = 71/99 (71%), Positives = 84/99 (84%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPR+ EIN+ LE+L K++ LGYVPD RFVLQ +DEE KKRSLYYHSEKLAI+F LL
Sbjct: 460 DLSHPRSREINETLEKLIGKVKLLGYVPDTRFVLQDMDEELKKRSLYYHSEKLAISFALL 519
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
N +T IRI+KNLRVCGDCH+WIKFV+KV+ +EIIAR
Sbjct: 520 MSSNKNTIIRIFKNLRVCGDCHSWIKFVTKVSGREIIAR 558
>ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Fragaria vesca subsp. vesca]
Length = 719
Score = 146 bits (368), Expect = 3e-33
Identities = 69/99 (69%), Positives = 83/99 (83%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPR+ EI + LE+L E+++ LGYVPD RFVLQ LDE++KKRSLYYHSEKLAIAF LL
Sbjct: 602 DLSHPRSGEITETLEKLFEEVQILGYVPDTRFVLQDLDEDKKKRSLYYHSEKLAIAFALL 661
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+T IRI+KNL+VCGDCH+WIKFV+KV +EIIAR
Sbjct: 662 RSSKKNTIIRIFKNLKVCGDCHSWIKFVTKVTGREIIAR 700
>gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis]
Length = 728
Score = 141 bits (355), Expect = 1e-31
Identities = 69/99 (69%), Positives = 78/99 (78%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHPR+ EI + LE L EK+ +LGYVPD RFVLQ LDEE K+RSLYYHSEKLA AF L
Sbjct: 611 DWSHPRSNEILETLEYLFEKVTSLGYVPDTRFVLQNLDEESKRRSLYYHSEKLATAFALW 670
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+ RN T IRI+KNLRVCGDCH+WIK VS V +EIIAR
Sbjct: 671 TTRNRGTSIRIFKNLRVCGDCHSWIKLVSNVVGREIIAR 709
>ref|XP_007158349.1| hypothetical protein PHAVU_002G145200g [Phaseolus vulgaris]
gi|561031764|gb|ESW30343.1| hypothetical protein
PHAVU_002G145200g [Phaseolus vulgaris]
Length = 676
Score = 134 bits (336), Expect = 2e-29
Identities = 68/99 (68%), Positives = 76/99 (76%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPRA EI + L L EK++TLGY PD RFVLQ LDEE+K SLYYHSEKLAIAF L
Sbjct: 559 DLSHPRAHEIFEMLHGLMEKVKTLGYNPDTRFVLQDLDEEKKMSSLYYHSEKLAIAFALW 618
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
ST IRI+KNLRVCGDCH+WIKFVS + + IIAR
Sbjct: 619 KTIGRSTTIRIFKNLRVCGDCHSWIKFVSLLTGRYIIAR 657
>ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 134 bits (336), Expect = 2e-29
Identities = 64/99 (64%), Positives = 76/99 (76%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP +I ++LE L EK++ LGYVPD RFVLQ LDEE+K RSLYYHSEKLA+AF L
Sbjct: 634 DWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALW 693
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+T IRI KNLRVCGDCH W+KFVSK+ ++IIAR
Sbjct: 694 RSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIAR 732
>emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 134 bits (336), Expect = 2e-29
Identities = 64/99 (64%), Positives = 76/99 (76%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP +I ++LE L EK++ LGYVPD RFVLQ LDEE+K RSLYYHSEKLA+AF L
Sbjct: 603 DWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALW 662
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+T IRI KNLRVCGDCH W+KFVSK+ ++IIAR
Sbjct: 663 RSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIAR 701
>ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 676
Score = 130 bits (327), Expect = 2e-28
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPRA EI++ L L EK+ TLGY PD +FVLQ L+EE+K +LYYHSEKLAIAF L
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALW 618
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+T IRI+KNLRVCGDCH+WIKFVS + ++IIAR
Sbjct: 619 KTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIAR 657
>ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Cicer arietinum]
Length = 677
Score = 128 bits (322), Expect = 7e-28
Identities = 63/99 (63%), Positives = 75/99 (75%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPRA EI + L L EK++T+GY PD +FVLQ L+EE+K SLYYHSEKLAIAF L
Sbjct: 560 DLSHPRAHEILEMLHELIEKVKTIGYNPDTKFVLQNLEEEKKISSLYYHSEKLAIAFALW 619
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
++ IRI+KNLRVCGDCH WIKFVS ++IIAR
Sbjct: 620 KSSGRTSTIRIFKNLRVCGDCHEWIKFVSLQTGRDIIAR 658
>ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like isoform X1 [Glycine max]
Length = 676
Score = 128 bits (321), Expect = 9e-28
Identities = 63/99 (63%), Positives = 77/99 (77%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
DLSHPR+ EI + L L +K++TLGY P+ RFVLQ LDEE+K SLYYHSEKLAIA+ L
Sbjct: 559 DLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALW 618
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+T IRI+KNLRVCGDCH+WIKFVS + ++IIAR
Sbjct: 619 KTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIAR 657
>ref|XP_004305608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Fragaria vesca subsp. vesca]
Length = 1625
Score = 122 bits (306), Expect = 5e-26
Identities = 61/99 (61%), Positives = 76/99 (76%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP A I D+LE L + I GYVPD FVL ++EEEK+R+LYYHSE+LAIA+GL+
Sbjct: 1509 DKSHPEADSIYDKLEDLMKWISEEGYVPDTEFVLADVEEEEKERALYYHSERLAIAYGLI 1568
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S SS IR+ KNLRVCGDCHN IK++SKV+Q+EI+ R
Sbjct: 1569 S-TPSSAIIRVIKNLRVCGDCHNAIKYISKVSQREIVVR 1606
>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 119 bits (299), Expect = 3e-25
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP+A I D++E + + I GYVPD FVL +++EEK+RSLYYHSEKLAIA+GL+
Sbjct: 1464 DRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI 1523
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S +ST IR+ KNLRVCGDCHN IK++SKV ++EI+ R
Sbjct: 1524 S-TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLR 1561
>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 119 bits (299), Expect = 3e-25
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP+A I D++E + + I GYVPD FVL +++EEK+RSLYYHSEKLAIA+GL+
Sbjct: 749 DRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI 808
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S +ST IR+ KNLRVCGDCHN IK++SKV ++EI+ R
Sbjct: 809 S-TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLR 846
>emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 119 bits (299), Expect = 3e-25
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP+A I D++E + + I GYVPD FVL +++EEK+RSLYYHSEKLAIA+GL+
Sbjct: 387 DRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI 446
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S +ST IR+ KNLRVCGDCHN IK++SKV ++EI+ R
Sbjct: 447 S-TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLR 484
>ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 844
Score = 117 bits (294), Expect = 1e-24
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHP+A EI DE++RL KI+ LGYVPD +VL +DEE+K+ L+ HSEKLA+ FGL+
Sbjct: 728 DTSHPKAQEIYDEMDRLGSKIKKLGYVPDTDYVLHEVDEEQKEYYLFQHSEKLAVTFGLI 787
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S S IR++KNLRVCGDCH IK++SK +EI+ R
Sbjct: 788 STSKSKP-IRVFKNLRVCGDCHTAIKYISKATGREIVVR 825
>gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 152
Score = 117 bits (292), Expect = 2e-24
Identities = 59/99 (59%), Positives = 73/99 (73%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D+SHP+ +I EL+ L E+I GYVPD RFVL L EEEKK SL +HSEKLAIAFGL+
Sbjct: 43 DVSHPKTEQIYIELQNLSEQIVQAGYVPDTRFVLHDLTEEEKKFSLCHHSEKLAIAFGLI 102
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S +T IR+ KNLR+CGDCH+ KF+SK+ +EII R
Sbjct: 103 STPQGAT-IRVIKNLRICGDCHSATKFISKLVDREIIVR 140
>ref|XP_001775099.1| predicted protein [Physcomitrella patens]
gi|162673550|gb|EDQ60071.1| predicted protein
[Physcomitrella patens]
Length = 804
Score = 116 bits (290), Expect = 4e-24
Identities = 59/99 (59%), Positives = 76/99 (76%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHPR EI ELE LK+++++LGYVPD RFV+ LD+E K+R++ +HSEKLAIA+GL+
Sbjct: 688 DQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLI 747
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S T IRI KNLRVC DCH KF+SK+ ++EIIAR
Sbjct: 748 S-TPPGTPIRISKNLRVCTDCHTATKFISKITKREIIAR 785
>gb|AEU08419.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 115 bits (287), Expect = 8e-24
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D+SHP A EI EL RL E+I+ GY+PD R VL+ +DEE K+R+L+ HSEKLAIA+GL+
Sbjct: 43 DISHPEAGEIYAELNRLTERIKAEGYIPDTRLVLENIDEEGKERALFSHSEKLAIAYGLI 102
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
+ IR+YKNLRVC DCH KF+SKV +EI+AR
Sbjct: 103 RIPDGKP-IRVYKNLRVCPDCHTATKFISKVTGREIVAR 140
>ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citrus clementina]
gi|557524949|gb|ESR36255.1| hypothetical protein
CICLE_v10027922mg [Citrus clementina]
Length = 705
Score = 114 bits (285), Expect = 1e-23
Identities = 54/97 (55%), Positives = 74/97 (76%)
Frame = +3
Query: 9 SHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLLSK 188
+HP+ +I DEL L K+++LGYVPD FVLQ ++E+EK+ L HSE+LAIAFG++S
Sbjct: 591 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 650
Query: 189 RNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S I+I+KNLRVCGDCHNW KF+S++ ++EII R
Sbjct: 651 PPKSP-IQIFKNLRVCGDCHNWTKFISQITEREIIVR 686
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 114 bits (285), Expect = 1e-23
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = +3
Query: 3 DLSHPRATEINDELERLKEKIETLGYVPDVRFVLQYLDEEEKKRSLYYHSEKLAIAFGLL 182
D SHPR EI ELE L ++I++LGYVPD RFV+ LD+E K+R++ +HSEKLAIA+GL+
Sbjct: 704 DQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLI 763
Query: 183 SKRNSSTCIRIYKNLRVCGDCHNWIKFVSKVAQKEIIAR 299
S T IR+ KNLRVC DCH KF+SK+ +EIIAR
Sbjct: 764 S-TPPETPIRVSKNLRVCTDCHTATKFISKITGREIIAR 801