BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004320
         (460 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   119   6e-25
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              119   6e-25
ref|XP_007028710.1| Tetratricopeptide repeat (TPR)-like superfam...   110   2e-22
ref|XP_002308939.2| pentatricopeptide repeat-containing family p...    99   6e-19
ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_002529506.1| pentatricopeptide repeat-containing protein,...    93   4e-17
gb|EYU18729.1| hypothetical protein MIMGU_mgv1a001312mg [Mimulus...    91   1e-16
ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citr...    91   2e-16
ref|XP_007162186.1| hypothetical protein PHAVU_001G131500g [Phas...    89   6e-16
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...    87   3e-15
ref|XP_007204264.1| hypothetical protein PRUPE_ppa001801mg [Prun...    86   5e-15
ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_006850541.1| hypothetical protein AMTR_s00159p00058480 [A...    83   5e-14
gb|EPS67317.1| hypothetical protein M569_07453, partial [Genlise...    83   5e-14
ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Caps...    82   6e-14

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
 Frame = +2

Query: 143 NPLFPKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETK-VGFVDYDEGKSSVS 319
           +P+      +T S   K ++    T +TLISCK+  ++GA EE K V FVDYD GK  VS
Sbjct: 8   SPIIFDFPHSTHSPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVS 67

Query: 320 VHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
            HVSGLRK D+PK YRLRV+ DR Q+DW++S++VE++LKLNHWDDVE
Sbjct: 68  THVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVE 114


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
 Frame = +2

Query: 143 NPLFPKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETK-VGFVDYDEGKSSVS 319
           +P+      +T S   K ++    T +TLISCK+  ++GA EE K V FVDYD GK  VS
Sbjct: 8   SPIIFDFPHSTHSPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVS 67

Query: 320 VHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
            HVSGLRK D+PK YRLRV+ DR Q+DW++S++VE++LKLNHWDDVE
Sbjct: 68  THVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVE 114


>ref|XP_007028710.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508717315|gb|EOY09212.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 841

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/109 (49%), Positives = 77/109 (70%)
 Frame = +2

Query: 134 TLQNPLFPKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSS 313
           TL +PL  K T  +   T      ++   ++L+ CKKR  + A+E+ K GFVDYD+G+  
Sbjct: 3   TLPHPLPLKLTLQSPDST------HSTRPKSLVLCKKRKNDTAFEDQKSGFVDYDKGQHE 56

Query: 314 VSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           VS  VSGLRK D+PKRYRLRV+GDR Q+DW +S++V++I +LNHW++VE
Sbjct: 57  VSTRVSGLRKADIPKRYRLRVEGDRFQKDWTVSEVVDQIQELNHWENVE 105


>ref|XP_002308939.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335476|gb|EEE92462.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 822

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = +2

Query: 230 ISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAI 409
           I CK    + A+EE K GFVDYD+G   VS  VSG+RKD +P+RYR+RVQGDR Q+DW++
Sbjct: 24  ILCKNSKNDAAFEEKKSGFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQGDRFQKDWSV 83

Query: 410 SQLVEKILKLNH-WDDVE 460
           SQ+V+K+L+L+H  DDVE
Sbjct: 84  SQVVQKVLELDHKSDDVE 101


>ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Solanum lycopersicum]
          Length = 834

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
 Frame = +2

Query: 134 TLQNP---LFPKHTTATSSRTTKKNHCNNRTIRTLISCKKRN-TEGAWEETKVGFVDYDE 301
           T+QNP    FP+H          K H     I +    K +N  + A+EE K   VDYD+
Sbjct: 3   TIQNPHISTFPQHPNPKF-----KTHFRASIIVSQKQQKPKNDNKAAYEEKKKASVDYDK 57

Query: 302 GKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           G   V+V + G RK DLPK  RLRV+GDR Q+DW +S++VEKI+K+NHWDD+E
Sbjct: 58  GIHKVTVRIDGFRKSDLPKHQRLRVEGDRFQKDWGVSEVVEKIMKINHWDDIE 110


>ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Solanum tuberosum]
          Length = 834

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
 Frame = +2

Query: 113 AHKPSQPTLQNPLFPKH--TTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETKVGF 286
           +H  + P   NP F  H  T+ T S+  +K               K + + A+EE K   
Sbjct: 7   SHISTIPQHPNPKFKTHVRTSITVSQKQQK--------------PKNDNKAAFEEKKKAS 52

Query: 287 VDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           VDYD+G   V+V + G RK DLPK  RLRV+GDR Q+DW +S++VEKI+K+NHWDD+E
Sbjct: 53  VDYDKGIHKVTVRIDGFRKSDLPKHQRLRVEGDRFQKDWGVSEVVEKIMKINHWDDIE 110


>ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 837

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 8/94 (8%)
 Frame = +2

Query: 197 NHC--------NNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDL 352
           NHC        + R  R  ISCKK++ + A++ETK GFVDYD G+  VS  +SGLRKDD+
Sbjct: 6   NHCLQLAGATESTRRWRISISCKKKSDKLAFKETKEGFVDYDRGQHEVSTKISGLRKDDI 65

Query: 353 PKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDD 454
             RYRLRV G+R Q DW +S++ E +L LN  DD
Sbjct: 66  AARYRLRVAGNRFQMDWTVSEVAELVLSLNLSDD 99


>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 808

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = +2

Query: 230 ISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAI 409
           + CKK   + A++E K GFVDYD G+  VS  V+G RK DL KRYRL+V GDR QRDW +
Sbjct: 18  LHCKKAKNDVAFQEKKSGFVDYDTGQHQVSTQVTGFRKCDLQKRYRLKVGGDRFQRDWTL 77

Query: 410 SQLVEKILKLN-HWDDVE 460
           SQ+V KIL+LN  +DDVE
Sbjct: 78  SQVVSKILELNPKYDDVE 95


>gb|EYU18729.1| hypothetical protein MIMGU_mgv1a001312mg [Mimulus guttatus]
          Length = 842

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = +2

Query: 212 RTIRTLISC-KKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDR 388
           +T  + I C  K +    +EE K   VDYD G   ++  + G+RK DLPKR+RLRV+GDR
Sbjct: 23  KTAASTIYCFAKSSNIDPFEEKKQAHVDYDAGTHKLTTRIPGVRKSDLPKRHRLRVEGDR 82

Query: 389 SQRDWAISQLVEKILKLNHWDDVE 460
            Q+DWA+S++VE+++KL+HW+D+E
Sbjct: 83  FQKDWAVSEVVERVIKLHHWEDIE 106


>ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X2 [Cicer arietinum]
          Length = 830

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = +2

Query: 206 NNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGD 385
           + R  ++ ++ KK+  E A++ETK GFVDYD G+  VS  ++GLRKDD+P  YRLRV G+
Sbjct: 17  STRPPKSTLTRKKKTNELAFKETKDGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAGN 76

Query: 386 RSQRDWAISQLVEKILKLNHWDDVE 460
           R Q+DW +S++ + IL L   DDVE
Sbjct: 77  RFQKDWTVSEVTDSILSLTLRDDVE 101


>ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X1 [Cicer arietinum]
          Length = 834

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = +2

Query: 206 NNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGD 385
           + R  ++ ++ KK+  E A++ETK GFVDYD G+  VS  ++GLRKDD+P  YRLRV G+
Sbjct: 17  STRPPKSTLTRKKKTNELAFKETKDGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAGN 76

Query: 386 RSQRDWAISQLVEKILKLNHWDDVE 460
           R Q+DW +S++ + IL L   DDVE
Sbjct: 77  RFQKDWTVSEVTDSILSLTLRDDVE 101


>ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citrus clementina]
           gi|557523199|gb|ESR34566.1| hypothetical protein
           CICLE_v10004305mg [Citrus clementina]
          Length = 846

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/102 (42%), Positives = 67/102 (65%)
 Frame = +2

Query: 155 PKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSG 334
           P  T + S +   K HCN +         K +    ++  + GFVDYD+G+  VS  VSG
Sbjct: 17  PDSTHSNSLKPPLKIHCNAKRK------PKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSG 70

Query: 335 LRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           LRK D+P+R+RL V+G+R Q+DW++S++VE++L+L H++DVE
Sbjct: 71  LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLELKHYEDVE 112


>ref|XP_007162186.1| hypothetical protein PHAVU_001G131500g [Phaseolus vulgaris]
           gi|561035650|gb|ESW34180.1| hypothetical protein
           PHAVU_001G131500g [Phaseolus vulgaris]
          Length = 829

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/80 (51%), Positives = 58/80 (72%)
 Frame = +2

Query: 221 RTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRD 400
           RT ISCKK+  + A++ETK GFVDYD G   VS  +SGLRKD++   YRLRV G+R Q+D
Sbjct: 21  RTSISCKKKTDKIAFKETKEGFVDYDLGLHEVSTKISGLRKDNIATHYRLRVAGNRFQKD 80

Query: 401 WAISQLVEKILKLNHWDDVE 460
           W +S++ + +L L+  DD++
Sbjct: 81  WTVSEVADLVLSLDLSDDID 100


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/85 (47%), Positives = 58/85 (68%)
 Frame = +2

Query: 206 NNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGD 385
           + R  ++  + KK + E A++E K GFVDYD G   VS  +SGLRK+D+P  YRLRV G+
Sbjct: 18  STRPPKSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISGLRKEDIPAHYRLRVAGN 77

Query: 386 RSQRDWAISQLVEKILKLNHWDDVE 460
           R Q+DW +S++V+ +L L   DD+E
Sbjct: 78  RFQKDWTVSEVVDSVLSLTLRDDIE 102


>ref|XP_007204264.1| hypothetical protein PRUPE_ppa001801mg [Prunus persica]
           gi|462399795|gb|EMJ05463.1| hypothetical protein
           PRUPE_ppa001801mg [Prunus persica]
          Length = 763

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
 Frame = +2

Query: 224 TLISCKK--RNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQR 397
           T I CKK   N+  A+EE K   VDYD G   +S  + GL K  +PK +RLRV+ +R Q+
Sbjct: 17  TRIVCKKPANNSSSAFEEKKQVSVDYDRGTHHISTRIPGLTKQHIPKHHRLRVETERFQK 76

Query: 398 DWAISQLVEKILKLNHWDDVE 460
           DWA+S +V+++ KL HWDD+E
Sbjct: 77  DWAVSDVVDRVYKLRHWDDIE 97


>ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X2 [Citrus sinensis]
          Length = 846

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/102 (40%), Positives = 65/102 (63%)
 Frame = +2

Query: 155 PKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSG 334
           P  T + S +   K H N +         K +    ++  + GFVDYD+G+  VS  VSG
Sbjct: 17  PDSTHSNSLKPPLKIHSNAKRK------PKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSG 70

Query: 335 LRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           LRK D+P+R+RL V+G+R Q+DW++S++VE++L L +++DVE
Sbjct: 71  LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLALKYYEDVE 112


>ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X1 [Citrus sinensis]
          Length = 859

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/102 (40%), Positives = 65/102 (63%)
 Frame = +2

Query: 155 PKHTTATSSRTTKKNHCNNRTIRTLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSG 334
           P  T + S +   K H N +         K +    ++  + GFVDYD+G+  VS  VSG
Sbjct: 17  PDSTHSNSLKPPLKIHSNAKRK------PKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSG 70

Query: 335 LRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
           LRK D+P+R+RL V+G+R Q+DW++S++VE++L L +++DVE
Sbjct: 71  LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLALKYYEDVE 112


>ref|XP_006850541.1| hypothetical protein AMTR_s00159p00058480 [Amborella trichopoda]
           gi|548854192|gb|ERN12122.1| hypothetical protein
           AMTR_s00159p00058480 [Amborella trichopoda]
          Length = 840

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
 Frame = +2

Query: 158 KHTTATSSRTTKKNHCNNRTIRTLISC----------KKRNTEGAWEETKVGFVDYDEGK 307
           + T +   R+T    C ++     +SC          ++      W++ +VG V+YD G 
Sbjct: 16  RETISPQPRSTLSTPCTSKRTCLWVSCSSTRSPPHEFQEEEVAEPWKKIRVGSVNYDTGS 75

Query: 308 SSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKLNHWDDVE 460
             +   +SGLR +D PKRY  R+ G R +RDW+IS +VE +L +NHW+D++
Sbjct: 76  HELRTQISGLRLEDAPKRYYCRMAGRRRERDWSISDVVENVLSVNHWEDID 126


>gb|EPS67317.1| hypothetical protein M569_07453, partial [Genlisea aurea]
          Length = 821

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 38/79 (48%), Positives = 53/79 (67%)
 Frame = +2

Query: 224 TLISCKKRNTEGAWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDW 403
           ++I C KR    +++ETKV  VDYD G   +   + G+ K DLP R RLRV+GDR QRDW
Sbjct: 21  SIIRCSKRLNPDSFKETKVARVDYDAGTHKLFTLIPGIMKSDLPTRNRLRVEGDRFQRDW 80

Query: 404 AISQLVEKILKLNHWDDVE 460
            ++++VE I  LNH +D+E
Sbjct: 81  TVTEVVEMINDLNHGEDIE 99


>ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Capsella rubella]
           gi|482562382|gb|EOA26572.1| hypothetical protein
           CARUB_v10022630mg [Capsella rubella]
          Length = 841

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 34/67 (50%), Positives = 53/67 (79%)
 Frame = +2

Query: 260 AWEETKVGFVDYDEGKSSVSVHVSGLRKDDLPKRYRLRVQGDRSQRDWAISQLVEKILKL 439
           A++E K   V+YD G+  VSV V GLRK D+P+RYRLRV+ DR Q+DW++S++V++++ L
Sbjct: 55  AFQEKKSVSVNYDRGEHEVSVRVGGLRKADIPRRYRLRVENDRFQKDWSVSEVVDRLMAL 114

Query: 440 NHWDDVE 460
           N W++V+
Sbjct: 115 NRWEEVD 121