BLASTX nr result
ID: Cocculus22_contig00004015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004015
(882 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containi... 347 5e-93
gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis] 346 8e-93
ref|XP_007207048.1| hypothetical protein PRUPE_ppb025182mg [Prun... 337 5e-90
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 325 1e-86
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 324 2e-86
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,... 318 2e-84
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 313 4e-83
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 310 5e-82
gb|EYU44055.1| hypothetical protein MIMGU_mgv1a002435mg [Mimulus... 288 1e-75
ref|XP_006433546.1| hypothetical protein CICLE_v10003403mg [Citr... 234 4e-59
ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Popu... 226 7e-57
emb|CBI39605.3| unnamed protein product [Vitis vinifera] 224 4e-56
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 202 1e-49
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 199 9e-49
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami... 197 6e-48
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis] 196 8e-48
ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A... 196 1e-47
ref|XP_002528778.1| pentatricopeptide repeat-containing protein,... 196 1e-47
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi... 191 4e-46
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi... 190 7e-46
>ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 347 bits (889), Expect = 5e-93
Identities = 164/294 (55%), Positives = 225/294 (76%), Gaps = 2/294 (0%)
Frame = +1
Query: 4 TMSTITATEPPYHFTPTKLSQDNTPVPT--LTHQAISNLLDVKCTNSLQNLKQAHALAIK 177
T +T T T P+H P + S ++ P PT L+ + I ++L+ KCT SLQNLKQAH + ++
Sbjct: 4 TTTTTTTTNLPHHVKPKQASPESKP-PTFKLSQKTILHILNSKCTTSLQNLKQAHGVVLR 62
Query: 178 NGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEAL 357
+G QD+Y+ G+++KCY++ NF++ G ALKVFD V P+ F+WN +IKGCV+N + +++
Sbjct: 63 SGHFQDHYVAGTILKCYASSNFNNFGFALKVFDNVWKPNVFVWNIMIKGCVENYEALKSI 122
Query: 358 SFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMY 537
SFYYKMV + PN+FT+P LFKAC +V+A+EEG Q+HAHVVK L DGHIRS+ IQMY
Sbjct: 123 SFYYKMVDMNSRPNKFTYPMLFKACRLVQAVEEGLQIHAHVVKQQLSEDGHIRSAGIQMY 182
Query: 538 ASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMIS 717
AS G V EA+++L E +DVVCWNAMIDGY+KCG+++AA LF+ M KNVGSWNAM+S
Sbjct: 183 ASFGLVEEARRILLEDAASDVVCWNAMIDGYIKCGDVEAAKELFEHMPSKNVGSWNAMVS 242
Query: 718 GYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
G+ARCG+++ A LF+ M +RDEISWSAMIDGY++ G +KEAL VF+EMQ+ +
Sbjct: 243 GFARCGRLKDARGLFDSMTERDEISWSAMIDGYVQGGYHKEALEVFNEMQKEKI 296
Score = 81.6 bits (200), Expect = 4e-13
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 10/209 (4%)
Frame = +1
Query: 268 VFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQ-AWPNEFTFPPLFKACTIVR 444
+FD + W+++I G V+ +EAL + +M + A P++F + AC V
Sbjct: 256 LFDSMTERDEISWSAMIDGYVQGGYHKEALEVFNEMQKEKIASPSKFVLSSVLAACANVG 315
Query: 445 AIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMID 624
A+++G+ +H ++ K+ + D + ++ + MYA CGR+ A ++ + + +V WNAMI
Sbjct: 316 ALDQGKWVHGYIKKNSIQVDAVLGTALVDMYAKCGRLDMAWEVFENVKRKEVSTWNAMIG 375
Query: 625 GYLKCGNIDAAAALFQTMEDKNV-GSWNAMISGYARCGKIELAEK---LFNEMP-----Q 777
G G D A +F M+ KN+ + ++ + C E ++ +F+ M +
Sbjct: 376 GLAMHGRADDALDVFFKMQGKNLEPNGITFLNALSACAHGEFVDEGLTIFSSMKEMYGME 435
Query: 778 RDEISWSAMIDGYIKQGCYKEALIVFHEM 864
+ + ++D + + G +EA V + M
Sbjct: 436 AEVEHYGCVVDMFGRAGLLEEAEQVINSM 464
Score = 57.8 bits (138), Expect = 6e-06
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Frame = +1
Query: 127 CTN--SLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAF 300
C N +L K H KN D + +LV Y+ L A +VF+ V
Sbjct: 311 CANVGALDQGKWVHGYIKKNSIQVDAVLGTALVDMYAKCG--RLDMAWEVFENVKRKEVS 368
Query: 301 LWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHV 480
WN++I G + +AL ++KM PN TF AC ++EG + + +
Sbjct: 369 TWNAMIGGLAMHGRADDALDVFFKMQGKNLEPNGITFLNALSACAHGEFVDEGLTIFSSM 428
Query: 481 VK-HGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESR-EADVVCWNAMIDGYLKCGNI-- 648
+ +G+ + + M+ G + EA+Q+++ E + A++ GN+
Sbjct: 429 KEMYGMEAEVEHYGCVVDMFGRAGLLEEAEQVINSMPIEPSAAVYGALLGACRIHGNVEM 488
Query: 649 -DAAAALFQTMEDKNVGSWNAMISGYARCG 735
+ + +E +N G + + + YA G
Sbjct: 489 GERVGRILLELEPQNGGRYALLSNIYAEAG 518
>gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis]
Length = 616
Score = 346 bits (887), Expect = 8e-93
Identities = 165/290 (56%), Positives = 216/290 (74%)
Frame = +1
Query: 10 STITATEPPYHFTPTKLSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSA 189
+TIT T PYHF PT+LS + P L+ + I +L++ KC+NSL LKQAHAL +++G
Sbjct: 31 TTITTTNLPYHFKPTELSTETIPTSKLSQKTILDLINTKCSNSLHYLKQAHALVLRSGHF 90
Query: 190 QDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYY 369
QD+Y+ G+L+K Y+N + + A KVFD VP P+ F+WN +++GC+ NN+P +SFY
Sbjct: 91 QDHYVSGTLLKHYANPHLRNFAFAFKVFDHVPRPNVFVWNILLQGCLDNNEPFLVVSFYE 150
Query: 370 KMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCG 549
KM+ A PN+FTFP +FKACT+V+A EEG Q+HAHVVKH LGRDGH +SS IQMYAS G
Sbjct: 151 KMMAANCRPNKFTFPVVFKACTMVQAEEEGVQVHAHVVKHRLGRDGHAKSSGIQMYASFG 210
Query: 550 RVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYAR 729
+ A++ML++ E DVVCWNAMIDG K GN++AA +F M +NVGSWNAMISG+AR
Sbjct: 211 HLEAARRMLND--EIDVVCWNAMIDGCFKFGNVEAAKGVFGEMPSRNVGSWNAMISGFAR 268
Query: 730 CGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
CG IE A K F+EM +RDEISWSA+ +GYIK G +KEAL VF+ MQR G+
Sbjct: 269 CGMIETARKFFDEMSERDEISWSAITNGYIKGGYFKEALEVFYLMQREGI 318
Score = 81.3 bits (199), Expect = 5e-13
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A K FD++ W++I G +K +EAL +Y M P +F + AC
Sbjct: 275 ARKFFDEMSERDEISWSAITNGYIKGGYFKEALEVFYLMQREGIGPRKFILSSVLAACAN 334
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
V A+++G +HA+V ++ + D V A+
Sbjct: 335 VGALDQGRWIHAYVERNLI-------------------------------RVDAVLGTAL 363
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQR----DE 786
+D Y KCG +D A +F+ M K +WNAMI G A G+ E A +LF++M + D
Sbjct: 364 LDMYAKCGRLDLAWEVFENMRWKETFTWNAMIGGLAMHGRAEDAVELFSKMLKNKLKPDG 423
Query: 787 ISWSAMIDGYIKQGCYKEALIVFHEMQR 870
I++ +++ G + L +F M++
Sbjct: 424 ITFVNILNACAHGGLVDKGLRIFSSMKK 451
>ref|XP_007207048.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
gi|462402690|gb|EMJ08247.1| hypothetical protein
PRUPE_ppb025182mg [Prunus persica]
Length = 672
Score = 337 bits (863), Expect = 5e-90
Identities = 159/293 (54%), Positives = 224/293 (76%), Gaps = 3/293 (1%)
Frame = +1
Query: 10 STITATEPPYHFTPTKLSQDNTPVPT-LTHQAISNLLDVKCTNSLQNLKQAHALAIKNGS 186
++ T T P+H P ++S ++T + L+ + I ++L+ KCT SLQ+LKQAH +A+++G
Sbjct: 3 TSTTTTNLPHHIKPKEVSAESTASTSKLSQKTILHILNTKCTTSLQHLKQAHGVALRSGH 62
Query: 187 AQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFY 366
QD+Y+ G++VKCY++ +F + G ALKVFD V P+ F+WN +IKGC++NN+ +S+Y
Sbjct: 63 FQDHYVAGAIVKCYASQHFSNFGFALKVFDSVWRPNVFVWNIVIKGCLENNEALSCISYY 122
Query: 367 YKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASC 546
KMV A PN+FT+ LFKACT+V+A+EE Q+HAHVVK+ G DGHIRS+ IQMYAS
Sbjct: 123 CKMVAMNARPNKFTYSILFKACTLVQAVEEALQIHAHVVKNQFGEDGHIRSAGIQMYASF 182
Query: 547 GRVTEAKQMLDESREA-DVVCWNAMIDGYLKCGNIDAAAALFQT-MEDKNVGSWNAMISG 720
G V EA++MLDE+ E DV+C NAMIDGY+KCG+++AA LF+ M KNVGSWNAM+SG
Sbjct: 183 GLVEEARRMLDEAAELNDVICSNAMIDGYMKCGDVEAAKELFEKHMPSKNVGSWNAMVSG 242
Query: 721 YARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
ARCG ++ A +LF+ M ++DEISWSAM+DGYIK+GC+KEAL +F+EMQ+ +
Sbjct: 243 LARCGMLKEARELFDGMSEKDEISWSAMVDGYIKRGCHKEALEIFNEMQKENL 295
Score = 83.6 bits (205), Expect = 9e-14
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 21/274 (7%)
Frame = +1
Query: 106 SNLLDVKCTNSL-------QNLKQAHALAIKNGSAQD----NYIVGSLVKCYSNYNFHSL 252
+ L DV C+N++ +++ A L K+ +++ N +V L +C L
Sbjct: 196 AELNDVICSNAMIDGYMKCGDVEAAKELFEKHMPSKNVGSWNAMVSGLARC------GML 249
Query: 253 GCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAW-PNEFTFPPLFKA 429
A ++FD + W++++ G +K +EAL + +M P +F + A
Sbjct: 250 KEARELFDGMSEKDEISWSAMVDGYIKRGCHKEALEIFNEMQKENLLSPRKFILSSVLAA 309
Query: 430 CTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCW 609
C + A+++G+ +HA++ ++ + D + ++ + MYA CGR+ A ++ + ++ ++ W
Sbjct: 310 CANMGAVDQGKWVHAYIKRNTIQLDAVLGAALLDMYAKCGRLDMAWEVFENIKQKEISTW 369
Query: 610 NAMIDGYLKCGNIDAAAALFQTME----DKNVGSWNAMISGYARCGKIELAEKLFNEMPQ 777
NAMI G G D A LF M+ + N ++ +++ A G ++ F+ M Q
Sbjct: 370 NAMIGGLAMHGRADDAIELFSKMQRSKLEPNGVTFLNVLNACAHSGFVDKGLNFFSSMKQ 429
Query: 778 RDEIS-----WSAMIDGYIKQGCYKEALIVFHEM 864
I + M+D + + G +EA + + M
Sbjct: 430 FYGIEPEVEHYGCMVDMFGRAGQLEEAEQLINSM 463
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 325 bits (833), Expect = 1e-86
Identities = 156/293 (53%), Positives = 217/293 (74%), Gaps = 5/293 (1%)
Frame = +1
Query: 19 TATEPPYHFTPTKLSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDN 198
TATE PYH + +T L+H+AI +LL+ +CT SL +LKQAHAL ++ G QD+
Sbjct: 7 TATEAPYHHHHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDS 66
Query: 199 YIVGSLVKCYSNYN---FHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYY 369
YI GSLVK Y+N + + S +L+VFD V P+ FLWN +IK C++NN+P +A+ YY
Sbjct: 67 YIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYY 126
Query: 370 KMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCG 549
+M+VA PN++T+P + KAC+ + EG Q+HAH+VKHGLG DGHI SSAI+MYAS G
Sbjct: 127 EMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFG 186
Query: 550 RVTEAKQMLDE-SREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKN-VGSWNAMISGY 723
R+ EA+++LD+ E D VCWNAMIDGYL+ G ++AA LF+ M D++ + +WNAMISG+
Sbjct: 187 RLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGF 246
Query: 724 ARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
+RCG +E+A + F+EM +RDEISWSAMIDGYI++GC+ EAL +FH+MQ+ +R
Sbjct: 247 SRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Score = 91.3 bits (225), Expect = 5e-16
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A + FD++ W+++I G ++ EAL +++M + P +F P + AC
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ A+++G +H + ++ + DG + +S + MYA CGR+ A ++ ++ +V WNAM
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374
Query: 619 IDGYLKCGNIDAAAALFQTME-DKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISW 795
I G G + A LF M+ + N ++ +++ A G ++ +FN M R E
Sbjct: 375 IGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSM--RKEYGV 432
Query: 796 SAMIDGYIKQGCYKEAL 846
I+ Y GC + L
Sbjct: 433 EPQIEHY---GCIVDLL 446
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 324 bits (831), Expect = 2e-86
Identities = 157/294 (53%), Positives = 219/294 (74%), Gaps = 6/294 (2%)
Frame = +1
Query: 19 TATEPPYHFTPTKLSQDN-TPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQD 195
TATE PYH + + + T L+H+AI +LL+ +CT SL +LKQAHAL ++ G QD
Sbjct: 7 TATEAPYHHHHHLIPKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQD 66
Query: 196 NYIVGSLVKCYSNYN---FHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFY 366
+YI GSLVK Y+N + + S +L+VFD V P+ FLWN +IK C++NN+P +A+ Y
Sbjct: 67 SYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLY 126
Query: 367 YKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASC 546
Y+MVVA + PN++T+P + KAC+ + EG Q+HAH+VKHGLG DGHI SSAI+MYAS
Sbjct: 127 YEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASF 186
Query: 547 GRVTEAKQMLDE-SREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKN-VGSWNAMISG 720
GR+ EA+++LD+ E D VCWNAMIDGYL+ G ++AA LF+ M D++ + +WNAMISG
Sbjct: 187 GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISG 246
Query: 721 YARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
++RCG +E+A + F+EM +RDEISWSAMIDGYI++GC+ EAL +FH+MQ+ +R
Sbjct: 247 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Score = 89.7 bits (221), Expect = 1e-15
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A + FD++ W+++I G ++ EAL +++M + P +F P + AC
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ A+++G +H + ++ + DG + +S + MYA CGR+ A ++ ++ +V WNAM
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375
Query: 619 IDGYLKCGNIDAAAALFQTME-DKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISW 795
I G G + A LF M+ N ++ +++ A G ++ +FN M R E
Sbjct: 376 IGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSM--RKEYGV 433
Query: 796 SAMIDGYIKQGCYKEAL 846
I+ Y GC + L
Sbjct: 434 EPQIEHY---GCIVDLL 447
>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 422
Score = 318 bits (815), Expect = 2e-84
Identities = 151/288 (52%), Positives = 207/288 (71%)
Frame = +1
Query: 19 TATEPPYHFTPTKLSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDN 198
T T PYH +P +N P LT + I +LL+ KC S Q LKQ HA+ +++G +D+
Sbjct: 6 TTTHLPYHLSPA----ENKPTSKLTQKTILDLLNSKCNASFQYLKQIHAVILRSGHFEDH 61
Query: 199 YIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMV 378
Y+ G+L+KCY+N +F ++ A VFD VP P+ F++N IIK C+ N++P +A+ FYYKMV
Sbjct: 62 YVSGTLLKCYANPHFKNIDLAFTVFDHVPKPNVFVYNIIIKACLDNDEPFKAICFYYKMV 121
Query: 379 VAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVT 558
A A PN+FT+P L KAC + A +EG QLH HV+K GL D HIRS+ IQMYA+ G +
Sbjct: 122 AANARPNKFTYPSLLKACGVATAAKEGVQLHGHVIKQGLTGDVHIRSAGIQMYATLGHMA 181
Query: 559 EAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGK 738
A++MLDE E+DV+C+NAMIDGY K G++D+A LF+ MED++VGSWN M+SG A+ G
Sbjct: 182 AARRMLDEDGESDVICFNAMIDGYYKFGDVDSAKELFEKMEDRSVGSWNVMVSGLAKNGM 241
Query: 739 IELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
++ A +LFN+M ++DEISWS+MIDGYIK G YKEAL VF+ MQ +R
Sbjct: 242 VKEARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIR 289
Score = 88.6 bits (218), Expect = 3e-15
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A ++F+ + W+S+I G +K + +EAL + M + P +F + AC
Sbjct: 245 ARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACAN 304
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ A+++G +HA+V K+ MY D V A+
Sbjct: 305 LGALDQGRWIHAYVKKN-------------PMYL------------------DAVLGTAL 333
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQR----DE 786
+D Y KCG +D A +F+TM++K V +WNAMI G A G+ E A KLF +M + +E
Sbjct: 334 VDMYAKCGRLDMAWDVFETMKEKEVFTWNAMICGLAMHGRAEDAIKLFLKMQKEKVRSNE 393
Query: 787 ISWSAMIDGYIKQGCYKEALIVFHEMQR 870
I++ +++ +G E L + M++
Sbjct: 394 ITFVGLLNACAHKGMVDEGLNILDSMEK 421
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 313 bits (803), Expect = 4e-83
Identities = 152/293 (51%), Positives = 207/293 (70%), Gaps = 1/293 (0%)
Frame = +1
Query: 7 MSTITATEPPYHFTPTKLSQD-NTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNG 183
MS+I+ + P F P S + N P L + + L D K SLQ L Q HAL +++G
Sbjct: 1 MSSISTSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSG 60
Query: 184 SAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSF 363
QD+Y+ G+L+KCY+N +F + ALKVF +P+P+ F+WN +IKGC++NN +A+ F
Sbjct: 61 HFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYF 120
Query: 364 YYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYAS 543
Y +MV+ A PN+FT+P LFKAC++ +A++EG Q+H HVVKHG+G D HI+S+ IQMYAS
Sbjct: 121 YGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYAS 179
Query: 544 CGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGY 723
GR+ +A++M S E+DVVCWN MIDGYLKCG ++AA LF M KN+GSWN MI+G
Sbjct: 180 FGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL 238
Query: 724 ARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
A+ G + A KLF+EM +RDEISWS+M+DGYI G YKEAL +F +MQR R
Sbjct: 239 AKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291
Score = 90.5 bits (223), Expect = 8e-16
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Frame = +1
Query: 247 SLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFK 426
+LG A K+FD++ W+S++ G + +EAL + +M + P F +
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 427 ACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVC 606
AC+ + AI++G +HA++ ++ + D + ++ + MYA CGR+ ++ +E +E ++
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 607 WNAMIDGYLKCGNIDAAAALFQTMED----KNVGSWNAMISGYARCGKIELAEKLFNEMP 774
WNAMI G G + A LF +++ N + +++ A G ++ ++F M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 775 QRDEIS-----WSAMIDGYIKQGCYKEALIVFHEM 864
+ + + M+D + G + EA + + M
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 310 bits (794), Expect = 5e-82
Identities = 150/293 (51%), Positives = 205/293 (69%), Gaps = 1/293 (0%)
Frame = +1
Query: 7 MSTITATEPPYHFTPTKLSQD-NTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNG 183
MS+I+ + P F P S + N P L + + L D K SLQ L Q H L +++G
Sbjct: 1 MSSISTSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSG 60
Query: 184 SAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSF 363
QD+Y+ G+L+KCY+N +F + ALKVF +P+P+ F+WN +IKGC++NN +A+ F
Sbjct: 61 HFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYF 120
Query: 364 YYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYAS 543
Y +MV+ A PN+FT+P LFKAC++ +A++EG Q+H HVVKHG+G D HI+S+ I MYAS
Sbjct: 121 YGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYAS 179
Query: 544 CGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGY 723
GR+ +A++M S E+DVVCWN MIDGYLKCG ++AA LF M KN+GSWN MI+G
Sbjct: 180 FGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL 238
Query: 724 ARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
A+ G + A KLF+EM +RDEISWS+M+DGYI G YKEAL +F +MQR R
Sbjct: 239 AKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291
Score = 90.5 bits (223), Expect = 8e-16
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Frame = +1
Query: 247 SLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFK 426
+LG A K+FD++ W+S++ G + +EAL + +M + P F +
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 427 ACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVC 606
AC+ + AI++G +HA++ ++ + D + ++ + MYA CGR+ ++ +E +E ++
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 607 WNAMIDGYLKCGNIDAAAALFQTMED----KNVGSWNAMISGYARCGKIELAEKLFNEMP 774
WNAMI G G + A LF +++ N + +++ A G ++ ++F M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 775 QRDEIS-----WSAMIDGYIKQGCYKEALIVFHEM 864
+ + + M+D + G + EA + + M
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
>gb|EYU44055.1| hypothetical protein MIMGU_mgv1a002435mg [Mimulus guttatus]
Length = 675
Score = 288 bits (738), Expect = 1e-75
Identities = 141/288 (48%), Positives = 200/288 (69%), Gaps = 3/288 (1%)
Frame = +1
Query: 25 TEPPYHFTPTK--LSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDN 198
TE PYH P + ++N L+++AI LL+ KCTNS +NLKQ HAL +K G QD+
Sbjct: 10 TELPYHPPPLQHLTHENNLANSNLSYKAILELLNQKCTNSFENLKQTHALILKTGYFQDH 69
Query: 199 YIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMV 378
YI GSL+KCY+N F +L L+V +QVP P+ F+WN IKGC+ P +A+S Y++MV
Sbjct: 70 YIAGSLLKCYANPQFGTLPNLLRVLEQVPEPNVFVWNFAIKGCLDLKHPSDAISMYFQMV 129
Query: 379 VAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVT 558
++ + PN++T+P L KACT RA+++G Q+H H+VK+GL D HI S+ IQMYAS R+
Sbjct: 130 ISGSKPNKYTYPQLLKACTFERALDQGLQIHNHIVKNGLNDDRHIISAGIQMYASLERLK 189
Query: 559 EAKQMLDES-READVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCG 735
EA+ +LD + D +C NAMIDGYLK G ++A+ LF +++K+VGSWN MISG G
Sbjct: 190 EARNLLDSNGMLRDTICCNAMIDGYLKSGEVEASRELFGIIQEKSVGSWNTMISGLCGNG 249
Query: 736 KIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
+ A+ F+++P +D+++WSAMIDGY K G +KEAL VF +MQR +
Sbjct: 250 MVLEAKDYFDDVPVKDDVTWSAMIDGYNKNGYFKEALEVFGQMQREEI 297
Score = 80.9 bits (198), Expect = 6e-13
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Frame = +1
Query: 136 SLQNLKQAHALAIKNGSAQDNYIVGSLVKCY---------------------SNYNFHSL 252
SL+ LK+A L NG +D +++ Y ++N
Sbjct: 184 SLERLKEARNLLDSNGMLRDTICCNAMIDGYLKSGEVEASRELFGIIQEKSVGSWNTMIS 243
Query: 253 GC--------ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFT 408
G A FD VP W+++I G KN +EAL + +M + ++F
Sbjct: 244 GLCGNGMVLEAKDYFDDVPVKDDVTWSAMIDGYNKNGYFKEALEVFGQMQREEIELSKFV 303
Query: 409 FPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDE-S 585
C + A+++G+ +HA++ + + D + +S + MYA CGR+ A + ++
Sbjct: 304 LSSALAVCANIGALDQGKWIHAYIRRKKMTLDEILGTSMVDMYAKCGRLDLAWGVFEKIK 363
Query: 586 READVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVG----SWNAMISGYARCGKIELAE 753
+ + CWNAMI G G A LF M+ NV ++ ++++ A G +
Sbjct: 364 KREETFCWNAMIGGLAMHGRAKDAIELFLKMQWHNVKPNEITFVSLLNACAHAGFVHEGL 423
Query: 754 KLFNEMPQRDEIS-----WSAMIDGYIKQGCYKEA 843
K F M Q+ EI + +++ K G + EA
Sbjct: 424 KFFVNMKQKYEIEPKVEHYGCVVNLLAKAGYFDEA 458
Score = 65.1 bits (157), Expect = 3e-08
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 8/239 (3%)
Frame = +1
Query: 88 LTHQAISNLLDVKCTN--SLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCA 261
L+ +S+ L V C N +L K HA + D + S+V Y+ L A
Sbjct: 299 LSKFVLSSALAV-CANIGALDQGKWIHAYIRRKKMTLDEILGTSMVDMYAKCG--RLDLA 355
Query: 262 LKVFDQVP-HPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
VF+++ F WN++I G + ++A+ + KM PNE TF L AC
Sbjct: 356 WGVFEKIKKREETFCWNAMIGGLAMHGRAKDAIELFLKMQWHNVKPNEITFVSLLNACAH 415
Query: 439 VRAIEEGEQLHAHVV-KHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDES-READVVCWN 612
+ EG + ++ K+ + + + A G EA+ ++ +A+ V W
Sbjct: 416 AGFVHEGLKFFVNMKQKYEIEPKVEHYGCVVNLLAKAGYFDEAENLIATMPMKANSVVWG 475
Query: 613 AMIDGYLKCGNIDAA---AALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQR 780
A++ GNI+ + +E +N G + + + YA+ GK + EKL M +R
Sbjct: 476 ALLGACRVHGNIELGERVGEILLDLEPENSGRYTLISNIYAKAGKWDRVEKLRVLMKER 534
>ref|XP_006433546.1| hypothetical protein CICLE_v10003403mg [Citrus clementina]
gi|557535668|gb|ESR46786.1| hypothetical protein
CICLE_v10003403mg [Citrus clementina]
Length = 558
Score = 234 bits (596), Expect = 4e-59
Identities = 109/190 (57%), Positives = 149/190 (78%)
Frame = +1
Query: 313 IIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHG 492
I++ +++N+P +S Y +MV + PN+FT+P +FKAC+I A +EG Q+HAHVVK+G
Sbjct: 8 ILRAYLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNG 67
Query: 493 LGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQ 672
L D H++SS IQMYA G V +A+Q+LD+ ++DV+CWNA+IDGYLKCG+I+AA LF+
Sbjct: 68 LCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEAAKELFK 127
Query: 673 TMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIV 852
+M+DKN GS+NAMISG+AR G+ E A KLFNEM +DEI+WSA+IDGY K G YKEAL V
Sbjct: 128 SMKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEV 187
Query: 853 FHEMQRSGVR 882
F+EMQR ++
Sbjct: 188 FNEMQRDKIK 197
Score = 82.0 bits (201), Expect = 3e-13
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A K+F+++ W++II G K+ +EAL + +M + P +F + AC
Sbjct: 153 ARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACAS 212
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ A+++G +H HV ++ + D + ++ + MYA CGR+ A ++ ++ + +V WNAM
Sbjct: 213 LGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAM 272
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVG----SWNAMISGYARCGKIELAEKLFNEMPQ 777
I G G D A LF M+ + + ++ ++S A G I+ + M Q
Sbjct: 273 IGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQ 329
>ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Populus trichocarpa]
gi|550337735|gb|ERP60172.1| hypothetical protein
POPTR_0005s01560g [Populus trichocarpa]
Length = 545
Score = 226 bits (577), Expect = 7e-57
Identities = 108/170 (63%), Positives = 131/170 (77%)
Frame = +1
Query: 373 MVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGR 552
M++A A PN+FT+P LFKACT A EEG Q+HAHV+K GL D HIRS+ IQMY S
Sbjct: 1 MMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFRE 60
Query: 553 VTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARC 732
V A++MLDE +DV+C+NAMIDGYLKCG ++ A LF +MEDKNVGSWN M+SG A+C
Sbjct: 61 VEGARRMLDEDGNSDVICFNAMIDGYLKCGEVEVAKGLFWSMEDKNVGSWNVMVSGMAKC 120
Query: 733 GKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
G IE A +LFNEM +++EISWSAMIDGYIK G YKEAL VF+ MQR +R
Sbjct: 121 GMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIR 170
Score = 80.9 bits (198), Expect = 6e-13
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Frame = +1
Query: 196 NYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKM 375
N +V + KC + A ++F+++ + W+++I G +K +EAL + M
Sbjct: 111 NVMVSGMAKC------GMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVM 164
Query: 376 VVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRV 555
+ P +F + AC + A+++G +HA+V + D + ++ + MYA CGR+
Sbjct: 165 QREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRL 224
Query: 556 TEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDK----NVGSWNAMISGY 723
A + ++ + +V WNAMI G G + A LF M+ + N + ++S
Sbjct: 225 DMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSAC 284
Query: 724 ARCGKIELAEKLFNEMPQ 777
A G ++ ++FN M +
Sbjct: 285 AHSGMVDEGLRIFNSMEE 302
>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 224 bits (570), Expect = 4e-56
Identities = 128/325 (39%), Positives = 189/325 (58%), Gaps = 43/325 (13%)
Frame = +1
Query: 19 TATEPPYHFTPTKLSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDN 198
TATE PYH + +T L+H+AI +LL+ +CT SL +LKQAHAL ++ G QD+
Sbjct: 28 TATEAPYHHHHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDS 87
Query: 199 YIVGSLVKCYSNYN---FHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYY 369
YI GSLVK Y+N + + S +L+VFD V P+ FLWN +IK C++NN+P +A+ YY
Sbjct: 88 YIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYY 147
Query: 370 KMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCG 549
+M+VA PN++T+P + KAC+ + EG Q+HAH+VKHGLG DGHI SSAI+MYAS G
Sbjct: 148 EMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFG 207
Query: 550 RVTEAKQMLDE-SREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNV----------- 693
R+ EA+++LD+ E D VC M D + G A +F M+ + +
Sbjct: 208 RLVEARRILDDKGGEVDAVC---MPD---RKGCFMEALEIFHQMQKEKIRPRKFVLPSVL 261
Query: 694 -----------GSW-----------------NAMISGYARCGKIELAEKLFNEMPQRDEI 789
G W +++ YA+CG+I+LA ++F +M ++
Sbjct: 262 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 321
Query: 790 SWSAMIDGYIKQGCYKEALIVFHEM 864
SW+AMI G G ++A+ +F +M
Sbjct: 322 SWNAMIGGLAMHGRAEDAIDLFSKM 346
Score = 92.8 bits (229), Expect = 2e-16
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Frame = +1
Query: 154 QAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVK 333
Q HA +K+G D +I+ S ++ Y++ F L A ++ D + KGC
Sbjct: 179 QVHAHLVKHGLGGDGHILSSAIRMYAS--FGRLVEARRILDDKGGEVDAVCMPDRKGCF- 235
Query: 334 NNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHI 513
EAL +++M + P +F P + AC + A+++G +H + ++ + DG +
Sbjct: 236 ----MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 291
Query: 514 RSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTME-DKN 690
+S + MYA CGR+ A ++ ++ +V WNAMI G G + A LF M+ + N
Sbjct: 292 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPN 351
Query: 691 VGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEAL 846
++ +++ A G ++ +FN M R E I+ Y GC + L
Sbjct: 352 EITFVGVLNACAHGGLVQKGLTIFNSM--RKEYGVEPQIEHY---GCIVDLL 398
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 202 bits (514), Expect = 1e-49
Identities = 95/250 (38%), Positives = 155/250 (62%), Gaps = 1/250 (0%)
Frame = +1
Query: 136 SLQNLKQAHALAIKNGSAQDNYIVGSLVKCYS-NYNFHSLGCALKVFDQVPHPHAFLWNS 312
S+ L QAHA +K+G + L+ S N + ++ A +F ++P+P++++WN+
Sbjct: 19 SISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNT 78
Query: 313 IIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHG 492
II+ + P+ AL+ +++M+ A P+++TF K+C +EEG Q+H HV+K G
Sbjct: 79 IIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 493 LGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQ 672
LG D I+++ I +YASCG + +A+ +LD E DVV WNA++ Y + G ++ A LF
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFD 198
Query: 673 TMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIV 852
M ++NV SWN MISGY G +E A ++F E P ++ +SW+AMI GY G + E L++
Sbjct: 199 EMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVL 258
Query: 853 FHEMQRSGVR 882
F +MQ +GV+
Sbjct: 259 FEDMQHAGVK 268
Score = 84.3 bits (207), Expect = 6e-14
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A +VF + P + WN++I G E L + M A P+ T + AC
Sbjct: 224 ARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAH 283
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
V A+ +GE +HA++ K+G+ DG + ++ + MY+ CG + +A ++ + D+ WN++
Sbjct: 284 VGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSI 343
Query: 619 IDGYLKCGNIDAAAALFQTM----EDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDE 786
I G G+ A +F M N ++ ++S +R G ++ ++FN M
Sbjct: 344 ISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHG 403
Query: 787 IS-----WSAMIDGYIKQGCYKEA 843
I + M+D + G +EA
Sbjct: 404 IQPTIEHYGCMVDLLGRVGLLEEA 427
Score = 76.6 bits (187), Expect = 1e-11
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Frame = +1
Query: 160 HALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNN 339
HA KNG + D ++ +LV YS S+ AL+VF+ WNSII G +
Sbjct: 294 HAYIDKNGISIDGFVATALVDMYSKCG--SIEKALEVFNSCLRKDISTWNSIISGLSTHG 351
Query: 340 DPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEG-EQLHAHVVKHGLGRDGHIR 516
Q AL + +M+V PNE TF + AC+ ++EG E + V HG+
Sbjct: 352 SGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGI------- 404
Query: 517 SSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVG 696
+ + + M+D + G ++ A L Q M K
Sbjct: 405 ------------------------QPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEAS 440
Query: 697 -SWNAMISGYARCGKIELAEKLFN---EMPQRDEISWSAMIDGYIKQGCYKEALIVFHEM 864
W +++ G +ELAE++ E+ ++ S+ + + Y G +K+ + V +M
Sbjct: 441 VVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKM 500
Query: 865 QRSGVR 882
+ GVR
Sbjct: 501 RAQGVR 506
Score = 65.5 bits (158), Expect = 3e-08
Identities = 72/332 (21%), Positives = 128/332 (38%), Gaps = 71/332 (21%)
Frame = +1
Query: 100 AISNLLDVKCTNS-LQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFD 276
A S L+ TNS Q + AH++ + + ++Y+ ++++ Y+N AL +F
Sbjct: 41 AASRLIASVSTNSHAQAIPYAHSIFSRIPNP-NSYMWNTIIRAYANSPTPE--AALTIFH 97
Query: 277 QVPH----PHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEF---TFPPLFKACT 435
Q+ H P + + +K C + +E + ++ + F T L+ +C
Sbjct: 98 QMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCG 157
Query: 436 IV--------RAIEEGE----------------QLHAHVVKHGLGRDGHIRSSAIQMYAS 543
+ R +E +L H+ R+ + I Y
Sbjct: 158 CIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVG 217
Query: 544 CGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNV---------- 693
G + EA+++ E+ +VV WNAMI GY G LF+ M+ V
Sbjct: 218 VGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSV 277
Query: 694 ------------GSW-----------------NAMISGYARCGKIELAEKLFNEMPQRDE 786
G W A++ Y++CG IE A ++FN ++D
Sbjct: 278 LSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDI 337
Query: 787 ISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
+W+++I G G + AL +F EM G +
Sbjct: 338 STWNSIISGLSTHGSGQHALQIFSEMLVEGFK 369
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 199 bits (507), Expect = 9e-49
Identities = 94/263 (35%), Positives = 166/263 (63%)
Frame = +1
Query: 76 PVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLG 255
P P L Q++S + C +L+ Q HAL++K G+ + I L+ Y+N + + L
Sbjct: 148 PPPPLPPQSLSFSILQSC-QTLKEATQLHALSLKTGAFTNPSIASRLLSLYANPSINHLP 206
Query: 256 CALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACT 435
AL VF +P+P+ +N ++K + N+ +AL +++++ A P+ FT P + KAC
Sbjct: 207 YALSVFSHLPNPNLISFNLLLKSHLLNHRSHDALLLFFRLLHHHA-PDNFTLPSVVKACA 265
Query: 436 IVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNA 615
+ A+ EG+Q+HA +K GLG + +++SS + +Y+ CG + A+++ DE RE D+V WN+
Sbjct: 266 RLGAVAEGKQVHALALKIGLGLEMYVQSSLVSLYSKCGAIECARKVFDEMRERDLVAWNS 325
Query: 616 MIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISW 795
+IDGY +CG +D A LF+ ME+++ SW ++ G ++CG ++ A ++F MP ++ +SW
Sbjct: 326 LIDGYARCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNVVSW 385
Query: 796 SAMIDGYIKQGCYKEALIVFHEM 864
+AMI+GY+K G +++A +F M
Sbjct: 386 NAMINGYMKGGEFEKARELFGRM 408
Score = 78.2 bits (191), Expect = 4e-12
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 39/282 (13%)
Frame = +1
Query: 151 KQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCV 330
KQ HALA+K G + Y+ SLV YS ++ CA KVFD++ WNS+I G
Sbjct: 274 KQVHALALKIGLGLEMYVQSSLVSLYSKCG--AIECARKVFDEMRERDLVAWNSLIDGYA 331
Query: 331 KNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGH 510
+ A+ + +M + L K + +A E E++ + V
Sbjct: 332 RCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNVVSW------ 385
Query: 511 IRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKN 690
++ I Y G +A+++ DV+ WN+MI GY G A LF+ + +++
Sbjct: 386 --NAMINGYMKGGEFEKARELFGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEED 443
Query: 691 VGSWNA---------------------------------------MISGYARCGKIELAE 753
V A +I Y++CG I+ A
Sbjct: 444 VRPTPATLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSAM 503
Query: 754 KLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
+F + ++ W+A+I G G + L +F EM+ +G+
Sbjct: 504 AVFEGIQRKKVGHWTAIIVGLGMHGMADQVLQLFLEMRTNGM 545
Score = 71.6 bits (174), Expect = 4e-10
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A ++F ++ WNS+I G N EAL + +++ P T + A +
Sbjct: 401 ARELFGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEEDVRPTPATLVSVLSAVSG 460
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ A+ +G +H+ +VKHG +G + +S I MY+ CG + A + + + V W A+
Sbjct: 461 LAALSKGRIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSAMAVFEGIQRKKVGHWTAI 520
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVG----SWNAMISGYARCGKIELAEKLFNEMPQRDE 786
I G G D LF M + ++ +++ + G ++L FN M +
Sbjct: 521 IVGLGMHGMADQVLQLFLEMRTNGMEPHGITFIGILNACSHAGLVDLGRYYFNMMRKDYG 580
Query: 787 IS-----WSAMIDGYIKQGCYKEALIVFHEM 864
I + ++D + GC EA + M
Sbjct: 581 IEPTIEHYGCLVDILCRAGCLDEAKDIIGSM 611
>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
cacao] gi|508702602|gb|EOX94498.1| Basic
helix-loop-helix DNA-binding superfamily protein
[Theobroma cacao]
Length = 600
Score = 197 bits (500), Expect = 6e-48
Identities = 101/268 (37%), Positives = 158/268 (58%), Gaps = 2/268 (0%)
Frame = +1
Query: 82 PTLTHQAISNLLDV--KCTNSLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLG 255
P Q I ++D KC+N L L+ +A IK + QD ++ V + F +
Sbjct: 41 PQTLSQQIQTIVDQIKKCSN-LNQLETIYATMIKTNANQDCFLTNQFVSACAT--FCRMD 97
Query: 256 CALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACT 435
A+ F Q+ P+ F++N++IKG V ++P +AL ++ M+ A WP+ FTF L KAC
Sbjct: 98 YAILAFTQMQKPNVFVYNALIKGLVHCHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACG 157
Query: 436 IVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNA 615
+V + GE +H V KHG ++++ + YA+ G+ E+K++ DE + DV W
Sbjct: 158 LVSELGFGESVHGQVWKHGFESHVFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTT 217
Query: 616 MIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISW 795
M+ G+LK G++ ++ LF M ++N +WNAMI GYAR G +E AE FN+MP +D ISW
Sbjct: 218 MVSGFLKAGDLVSSRRLFDEMPERNTATWNAMIDGYARVGDVESAELFFNQMPVKDIISW 277
Query: 796 SAMIDGYIKQGCYKEALIVFHEMQRSGV 879
++MI+ Y K ++EAL VF EM+R+ V
Sbjct: 278 TSMINCYSKNKQFREALAVFEEMRRNKV 305
Score = 94.7 bits (234), Expect = 4e-17
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Frame = +1
Query: 271 FDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAI 450
F+Q+P W S+I KN +EAL+ + +M + P+E T + AC + A+
Sbjct: 266 FNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVSPDEVTMASVISACAHLGAL 325
Query: 451 EEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGY 630
G+++H +V+++G D +I S+ + MYA CG + + + RE ++ CWN++I+G
Sbjct: 326 NTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEGL 385
Query: 631 LKCGNIDAAAALFQTMEDKNVG----SWNAMISGYARCGKIELAEKLFNEMPQRDEI--- 789
G A A+F +ME +V ++ +++S G +E+ + F M + I
Sbjct: 386 AVHGYAQEALAMFDSMERHHVKPNGVTFVSVLSACTHAGLVEVGRQRFLSMTRDYSIPPE 445
Query: 790 --SWSAMIDGYIKQGCYKEALIVFHEMQ 867
+ M+D K G ++AL + M+
Sbjct: 446 VEHYGCMVDLLSKAGLLEDALFLIRSMK 473
Score = 64.7 bits (156), Expect = 5e-08
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 4/253 (1%)
Frame = +1
Query: 136 SLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSI 315
+L K+ H ++NG D YI +LV Y+ SL +L F ++ + F WNS+
Sbjct: 324 ALNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCG--SLERSLLAFFKLREKNLFCWNSV 381
Query: 316 IKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGL 495
I+G + QEAL+ + M PN TF + ACT +E G Q + +
Sbjct: 382 IEGLAVHGYAQEALAMFDSMERHHVKPNGVTFVSVLSACTHAGLVEVGRQRFLSMTR--- 438
Query: 496 GRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQT 675
D S +V + M+D K G ++ A L ++
Sbjct: 439 ---------------------------DYSIPPEVEHYGCMVDLLSKAGLLEDALFLIRS 471
Query: 676 ME-DKNVGSWNAMISGYARCGKIELAEKLFNE---MPQRDEISWSAMIDGYIKQGCYKEA 843
M+ + N W A++ G +E+A+ NE + D ++ +++ Y + + +
Sbjct: 472 MKLEPNPVIWGALLGGCKLHRNLEIAQFAVNELMVLDPHDSGYYTLLLNLYAEVNRWAQV 531
Query: 844 LIVFHEMQRSGVR 882
+ M+ GV+
Sbjct: 532 TKIRQMMRELGVK 544
Score = 58.2 bits (139), Expect = 4e-06
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 10/254 (3%)
Frame = +1
Query: 151 KQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCV 330
+ H K+G ++ +LV Y+N + +VFD++P F W +++ G +
Sbjct: 166 ESVHGQVWKHGFESHVFVQTALVDFYANVG--KFAESKRVFDEMPDRDVFAWTTMVSGFL 223
Query: 331 KNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGH 510
K D + + +M N T+ + V +E E + +D
Sbjct: 224 KAGDLVSSRRLFDEMPER----NTATWNAMIDGYARVGDVESAELFFNQMPV----KDII 275
Query: 511 IRSSAIQMYASCGRVTEAKQMLDESRE----ADVVCWNAMIDGYLKCGNIDAAAALFQTM 678
+S I Y+ + EA + +E R D V ++I G ++ + +
Sbjct: 276 SWTSMINCYSKNKQFREALAVFEEMRRNKVSPDEVTMASVISACAHLGALNTGKEIHHYV 335
Query: 679 E------DKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKE 840
D +GS A++ YA+CG +E + F ++ +++ W+++I+G G +E
Sbjct: 336 MQNGFYLDVYIGS--ALVDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEGLAVHGYAQE 393
Query: 841 ALIVFHEMQRSGVR 882
AL +F M+R V+
Sbjct: 394 ALAMFDSMERHHVK 407
>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
Length = 686
Score = 196 bits (499), Expect = 8e-48
Identities = 90/241 (37%), Positives = 150/241 (62%)
Frame = +1
Query: 142 QNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIK 321
Q++K+ HAL+++ G+ YI L+ Y++ +SL A VFD +P P WN +IK
Sbjct: 34 QDVKRTHALSLRTGAFDHPYIASRLLALYADPKINSLDYARSVFDLIPVPDLVSWNILIK 93
Query: 322 GCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGR 501
V+N +A+ ++ +V + P+ FT P + K C + A+ EG+Q+H VVK G G
Sbjct: 94 CYVENQRSHDAICLFHDLV-HEFTPDCFTLPSVIKGCARLNAVPEGKQIHGLVVKIGFGL 152
Query: 502 DGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTME 681
D ++SS + MY+ CG + A+++ D+ E D+V WN +IDGY +CG ++ A LF M
Sbjct: 153 DKFVQSSLVSMYSRCGEMGYARKVFDQMGEKDLVLWNCLIDGYARCGEVEIALQLFDEMP 212
Query: 682 DKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHE 861
+++ SW ++ G+++CG++E+A +F+ MP R+ +SW+AMI+GY+K G + A +F E
Sbjct: 213 ERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSRNLVSWNAMINGYMKSGDVEMARRLFDE 272
Query: 862 M 864
M
Sbjct: 273 M 273
Score = 94.4 bits (233), Expect = 5e-17
Identities = 63/213 (29%), Positives = 94/213 (44%)
Frame = +1
Query: 133 NSLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNS 312
N++ KQ H L +K G D ++ SLV YS +G A KVFDQ+ LWN
Sbjct: 133 NAVPEGKQIHGLVVKIGFGLDKFVQSSLVSMYSRCG--EMGYARKVFDQMGEKDLVLWNC 190
Query: 313 IIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHG 492
+I G + + + AL + +M
Sbjct: 191 LIDGYARCGEVEIALQLFDEMP-------------------------------------- 212
Query: 493 LGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQ 672
RD + + ++ CGRV A+ + D ++V WNAMI+GY+K G+++ A LF
Sbjct: 213 -ERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSRNLVSWNAMINGYMKSGDVEMARRLFD 271
Query: 673 TMEDKNVGSWNAMISGYARCGKIELAEKLFNEM 771
M ++V +WN+MI+GY GK A LF M
Sbjct: 272 EMPTRDVITWNSMIAGYEFNGKFMEALYLFIAM 304
Score = 73.9 bits (180), Expect = 7e-11
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A ++FD++P WNS+I G N EAL + M+ PN TF A +
Sbjct: 266 ARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIAMLKEGLVPNHTTFVGALSAVSG 325
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ + +G+ +H+ +VK G+ +G + +S I+MY+ CG V A + + + W A+
Sbjct: 326 LAVLSKGKWIHSLMVKCGIESEGVLGTSLIEMYSKCGSVESALSVFRAISKKKLGHWTAI 385
Query: 619 IDGYLKCGNIDAAAALFQTME----DKNVGSWNAMISGYARCGKIELAEKLFNEM 771
I G G + A +F M + ++ +++ + G +EL FN M
Sbjct: 386 IVGLGMHGMAERALEMFSEMRRTGLQPHAITFLGVLNACSHAGLVELVRHYFNMM 440
>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
gi|548843491|gb|ERN03145.1| hypothetical protein
AMTR_s00003p00103190 [Amborella trichopoda]
Length = 297
Score = 196 bits (497), Expect = 1e-47
Identities = 101/224 (45%), Positives = 145/224 (64%)
Frame = +1
Query: 7 MSTITATEPPYHFTPTKLSQDNTPVPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGS 186
MS + +P +PTK + +TP HQ I+ LL+ KCT S+ +LKQ HA ++G
Sbjct: 68 MSVLGVVKPST--SPTKQALISTPT---AHQFIT-LLESKCT-SMNHLKQIHAQITRHGL 120
Query: 187 AQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFY 366
+Q+N+++ SLVK + +L A VF+Q+ PH F+WN++I+GC +NN +EA+ FY
Sbjct: 121 SQNNFLMASLVKFCAEPTSGNLNYARAVFNQLKDPHPFIWNTMIRGCSENNALEEAILFY 180
Query: 367 YKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASC 546
MV PN FTFP +FKAC ++A++EGEQ+H HV+KHGL GH+ SS IQMY SC
Sbjct: 181 CTMVQEDVQPNNFTFPSVFKACNGIKALKEGEQVHTHVIKHGLMSYGHVHSSMIQMYGSC 240
Query: 547 GRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTM 678
G++ A+++ D E DVV WN +ID +LK G ++ A LFQ M
Sbjct: 241 GQLPNARRLFDRIHEPDVVSWNCLIDSHLKNGELEEAKELFQNM 284
>ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531781|gb|EEF33600.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 518
Score = 196 bits (497), Expect = 1e-47
Identities = 109/277 (39%), Positives = 160/277 (57%), Gaps = 5/277 (1%)
Frame = +1
Query: 49 PTKLSQDNTP---VPTLTHQAISNLLDVKCTNSLQNLKQAHALAIKNGSAQDNYIVGSLV 219
PT+++ P V L HQ + L ++ C N ++ Q H I G Q G +
Sbjct: 36 PTQITPTLDPKVLVLDLNHQLLQKL-ELSCIN-IKQFNQIHTQLIVLGLFQHPLAAGRYI 93
Query: 220 KCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIKGCVK-NNDPQEALSFYY-KMVVAQAW 393
K N F+ L + ++D + P AF+ N+II+ V NNDP AL FYY KM+
Sbjct: 94 KKLCNTYFNLLSHCVYLYDYIEQPDAFICNTIIRCFVSLNNDPFGALRFYYDKMIAKWVL 153
Query: 394 PNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQM 573
PN +TFP L K C + +++EG++ HA VVK G D ++R+S + MY++CGRV +A+ +
Sbjct: 154 PNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSACGRVLDARLL 213
Query: 574 LDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAE 753
+ D+V WN+MI GY+K G+I A LF M +++ SWN+MISGY G +E A+
Sbjct: 214 FESGFVLDLVSWNSMIIGYVKNGDIGLARELFDEMPERDAFSWNSMISGYVGAGDVEAAK 273
Query: 754 KLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHEM 864
KLF+ MP RD +SW+ MIDGY K A +F++M
Sbjct: 274 KLFDNMPSRDVVSWNCMIDGYAKIRNVSVARWLFNQM 310
Score = 80.9 bits (198), Expect = 6e-13
Identities = 64/223 (28%), Positives = 89/223 (39%), Gaps = 5/223 (2%)
Frame = +1
Query: 136 SLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFL---- 303
SL+ ++AHA +K G D Y+ SL+ YS C + ++ F+
Sbjct: 171 SLKEGQKAHACVVKFGFEFDAYVRNSLLHMYS-------ACGRVLDARLLFESGFVLDLV 223
Query: 304 -WNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHV 480
WNS+I G VKN D A + +M
Sbjct: 224 SWNSMIIGYVKNGDIGLARELFDEMPE--------------------------------- 250
Query: 481 VKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAA 660
RD +S I Y G V AK++ D DVV WN MIDGY K N+ A
Sbjct: 251 ------RDAFSWNSMISGYVGAGDVEAAKKLFDNMPSRDVVSWNCMIDGYAKIRNVSVAR 304
Query: 661 ALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEI 789
LF M +N+ SWN M++ Y +C KLF+ M + E+
Sbjct: 305 WLFNQMPFRNIVSWNIMLALYLKCKNYGECLKLFDRMIEEREL 347
Score = 66.2 bits (160), Expect = 2e-08
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Frame = +1
Query: 268 VFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAW-PNEFTFPPLFKACTIVR 444
+F+Q+P + WN ++ +K + E L + +M+ + PN+ + + AC R
Sbjct: 306 LFNQMPFRNIVSWNIMLALYLKCKNYGECLKLFDRMIEERELRPNKASLMSVLTACANFR 365
Query: 445 AIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMID 624
++ G+ +H+++ + + D + ++ + MYA CG + A+ + + VV WN+MI
Sbjct: 366 RLDLGKWIHSYIKDNEVESDELLSTALLTMYAKCGMMDFARHIFTKMPHKSVVSWNSMIM 425
Query: 625 GYLKCGNIDAAAALFQTMEDKN-VGSWNAMISGYARCGKIEL 747
GY G+ + A F ME + + + +S + C EL
Sbjct: 426 GYAINGHAEKALETFLEMEKSSMMPNAATFVSVLSACSHAEL 467
>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Fragaria vesca subsp. vesca]
Length = 540
Score = 191 bits (484), Expect = 4e-46
Identities = 97/251 (38%), Positives = 151/251 (60%)
Frame = +1
Query: 124 KCTNSLQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFL 303
KCTN L+ LKQ HA + +G + +G L+ + ++G A KVFDQ+ P+ F+
Sbjct: 22 KCTN-LKALKQVHASMVIHGFNSNPSALGELIFASAMSISGTIGYAHKVFDQITEPNTFM 80
Query: 304 WNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVV 483
WN++I+G ++ P A+ Y +M P++FTFP + KAC + + G +H VV
Sbjct: 81 WNTMIRGSAQSLRPLNAVVLYTRMEKRGLRPDDFTFPFVLKACNKLCWVRMGMGIHGKVV 140
Query: 484 KHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAA 663
+ G + +R++ I +A CG + A + D S DVV W+A+ GY + G +DAA
Sbjct: 141 RFGFESNASVRNTLIDFHAKCGDLRVATALFDGSARRDVVAWSALTAGYARRGKLDAARR 200
Query: 664 LFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEA 843
LF M K++ SWN MI+GY + G++E A KLF+E+P+RD ++W+AMI GY++ GC ++A
Sbjct: 201 LFDEMPVKDLVSWNVMITGYTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQA 260
Query: 844 LIVFHEMQRSG 876
L +F EM G
Sbjct: 261 LQMFEEMTSLG 271
Score = 87.4 bits (215), Expect = 7e-15
Identities = 54/171 (31%), Positives = 82/171 (47%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
A K+FD+VP WN++I G V+ ++AL + +M P+E T L AC
Sbjct: 229 ARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTMLSLLSACAD 288
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
V +E G++LH+ +++ G G E ++ NA+
Sbjct: 289 VGELEIGKRLHSSLLELGSG------------------------------EISIIHGNAL 318
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEM 771
ID Y KCG+I+ A +F M +K+V SWN++I G A G E + LF EM
Sbjct: 319 IDMYSKCGSIERALEVFWGMREKDVSSWNSVIGGLAFHGHAEESVNLFEEM 369
Score = 70.9 bits (172), Expect = 6e-10
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 40/156 (25%)
Frame = +1
Query: 535 YASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTMED---------- 684
Y G + A+++ DE DVV WNAMI GY++CG ++ A +F+ M
Sbjct: 220 YTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTM 279
Query: 685 -------KNVGSW-----------------------NAMISGYARCGKIELAEKLFNEMP 774
+VG NA+I Y++CG IE A ++F M
Sbjct: 280 LSLLSACADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKCGSIERALEVFWGMR 339
Query: 775 QRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVR 882
++D SW+++I G G +E++ +F EM+R VR
Sbjct: 340 EKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKVR 375
>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 190 bits (482), Expect = 7e-46
Identities = 86/241 (35%), Positives = 147/241 (60%)
Frame = +1
Query: 142 QNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSIIK 321
Q ++Q HA ++K ++ L+ YS+ + LG A +FD++ WN+IIK
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86
Query: 322 GCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLGR 501
V+N + + ++++V + P+ FT P + K C + ++EG+Q+H +K G G
Sbjct: 87 CYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 145
Query: 502 DGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTME 681
D ++ S + MY+ CG + A+++ D + DVV WN++IDGY +CG ID A LF+ M
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP 205
Query: 682 DKNVGSWNAMISGYARCGKIELAEKLFNEMPQRDEISWSAMIDGYIKQGCYKEALIVFHE 861
+++ SW ++ G ++CGK+E A KLF++MP R+ +SW+AMI+GY+K G + AL +F++
Sbjct: 206 ERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQ 265
Query: 862 M 864
M
Sbjct: 266 M 266
Score = 95.5 bits (236), Expect = 2e-17
Identities = 78/286 (27%), Positives = 117/286 (40%), Gaps = 39/286 (13%)
Frame = +1
Query: 139 LQNLKQAHALAIKNGSAQDNYIVGSLVKCYSNYNFHSLGCALKVFDQVPHPHAFLWNSII 318
+Q KQ H LA+K G D ++ GSLV YS + CA KVFD + LWNS+I
Sbjct: 128 VQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCG--EIDCARKVFDGMIDKDVVLWNSLI 185
Query: 319 KGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTIVRAIEEGEQLHAHVVKHGLG 498
G + + AL + +M E + V+ GL
Sbjct: 186 DGYARCGEIDIALQLFEEM-------------------------PERDAFSWTVLVDGLS 220
Query: 499 RDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAMIDGYLKCGNIDAAAALFQTM 678
+ CG+V A+++ D+ ++V WNAMI+GY+K G+ D+A LF M
Sbjct: 221 K--------------CGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQM 266
Query: 679 EDKNVGSWNAMISGYARCGKIELAEKLFNEMP---------------------------- 774
++ +WN MI+GY G+ A K+F M
Sbjct: 267 PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGR 326
Query: 775 -----------QRDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGV 879
+ D I +++I+ Y K GC + AL VF +Q+ V
Sbjct: 327 WIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKV 372
Score = 66.2 bits (160), Expect = 2e-08
Identities = 45/171 (26%), Positives = 76/171 (44%)
Frame = +1
Query: 259 ALKVFDQVPHPHAFLWNSIIKGCVKNNDPQEALSFYYKMVVAQAWPNEFTFPPLFKACTI 438
AL++F Q+P WN +I G N +A+ ++ M+ + P+ T + A +
Sbjct: 259 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 318
Query: 439 VRAIEEGEQLHAHVVKHGLGRDGHIRSSAIQMYASCGRVTEAKQMLDESREADVVCWNAM 618
+ + +G +H+++ K+G DG + +S I+MYA
Sbjct: 319 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYA-------------------------- 352
Query: 619 IDGYLKCGNIDAAAALFQTMEDKNVGSWNAMISGYARCGKIELAEKLFNEM 771
KCG I++A +F+ ++ K VG W A+I G G A LF EM
Sbjct: 353 -----KCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEM 398