BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004006
         (2442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...   985   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              984   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   984   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   978   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   974   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   972   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   970   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      970   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   970   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         968   0.0  
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus...   965   0.0  
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   964   0.0  
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   962   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   962   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   962   0.0  
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   961   0.0  
ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   961   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   958   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   957   0.0  
ref|XP_007156393.1| hypothetical protein PHAVU_003G282700g [Phas...   956   0.0  

>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  985 bits (2547), Expect = 0.0
 Identities = 481/553 (86%), Positives = 505/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMRTHGAKQQRE VKRT R QLEPVFEALDTLG+TKWRVNKRVL VIDRIWASGG
Sbjct: 454  FLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGG 513

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWKLKAAKKENSERHSQRCDIELKLA +RKMK
Sbjct: 514  RLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMK 573

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF+EGR LGK GL+WLKIH+ANLY
Sbjct: 574  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLY 633

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS D R  FTENH+D+IFDSADRPLEGRRWWLGAEDPFQCLAACINL EALRS 
Sbjct: 634  AGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSP 693

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYSGIAARVL+IMR
Sbjct: 694  SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMR 753

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
             DAEKDPAT PNAL ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLK RG+I D
Sbjct: 754  NDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIAD 813

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            +T LF A+CYAA+ TLTALGEMF+AARSIMSWLG+CAKVIASEN  VRW TPLGLPVVQP
Sbjct: 814  DTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQP 873

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR+ GRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACKKAGLN
Sbjct: 874  YRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 933

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACD+DEMNRILREKFVELYE PILENLLE F+QSFPTL+FPPLP+RGDF
Sbjct: 934  FAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDF 993

Query: 821  DLREVLESTYFFN 783
            DLR+VLES YFFN
Sbjct: 994  DLRDVLESPYFFN 1006


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  984 bits (2543), Expect = 0.0
 Identities = 481/553 (86%), Positives = 508/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGA+QQREA+KR  R  LEP FEAL+TLGNTKWR+NKRVL VIDRIWASGG
Sbjct: 258  FLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGG 317

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWK+++ KKENSERHSQRCDIELKLAVARKMK
Sbjct: 318  RLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMK 377

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ FFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+AN+Y
Sbjct: 378  DEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 437

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS +GRV FTENHL+DIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALRSS
Sbjct: 438  AGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSS 497

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTIS+MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+
Sbjct: 498  SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQ 557

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA+KDPATEPNALRARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 558  RDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIAD 617

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            E E+F ASCYAAK TLTALGEMF+AARSIMSWLGDCAKVIASENH VRW TPLGLPVVQP
Sbjct: 618  EGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQP 677

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQVL+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+AC+KAGLN
Sbjct: 678  YRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLN 737

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELY  PILENLLE F++SFPTL+FPPLPERGDF
Sbjct: 738  FAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDF 797

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 798  DLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  984 bits (2543), Expect = 0.0
 Identities = 481/553 (86%), Positives = 508/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGA+QQREA+KR  R  LEP FEAL+TLGNTKWR+NKRVL VIDRIWASGG
Sbjct: 426  FLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGG 485

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWK+++ KKENSERHSQRCDIELKLAVARKMK
Sbjct: 486  RLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMK 545

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ FFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+AN+Y
Sbjct: 546  DEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 605

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS +GRV FTENHL+DIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALRSS
Sbjct: 606  AGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSS 665

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTIS+MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+
Sbjct: 666  SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQ 725

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA+KDPATEPNALRARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 726  RDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIAD 785

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            E E+F ASCYAAK TLTALGEMF+AARSIMSWLGDCAKVIASENH VRW TPLGLPVVQP
Sbjct: 786  EGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQP 845

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQVL+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+AC+KAGLN
Sbjct: 846  YRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLN 905

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELY  PILENLLE F++SFPTL+FPPLPERGDF
Sbjct: 906  FAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDF 965

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 966  DLREVLESPYFFN 978


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  978 bits (2527), Expect = 0.0
 Identities = 472/553 (85%), Positives = 508/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMRTHGAKQQRE VKRT R QLEP+FEALDTLGNTKWR+NKRVL V+DR+WA+GG
Sbjct: 444  FLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGG 503

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEI+ WKWK+KAA K+N+ERHS RCD+ELKLAVARKM+
Sbjct: 504  RVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMR 563

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGK GL+WLKIH+ANLY
Sbjct: 564  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY 623

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS +GR+ FTENHLDDIFDSADRPLEGRRWWL AEDPFQCLAACINLSEALRSS
Sbjct: 624  AGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSS 683

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTIS+MPVHQDGSCNGLQHYAALGRDKLGAA+VNLVAG+KPADVYSGIAARV++IMR
Sbjct: 684  SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMR 743

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDAEKDPA  P+AL ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 744  RDAEKDPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIAD 803

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            +TE+F ASCYAA+ TLTALGEMFQAARSIM+WLG+CAKVI+SEN  VRW TPLGLPVVQP
Sbjct: 804  DTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQP 863

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR+ GRHLIKTSLQVLTLQRETDKVM KRQRTAFPPNFVHSLDGSHMMMTA+ACKKAGLN
Sbjct: 864  YRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 923

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELYE PILENLLE F++SFP+L+FPPLPERGDF
Sbjct: 924  FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDF 983

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 984  DLREVLESPYFFN 996


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  974 bits (2519), Expect = 0.0
 Identities = 472/553 (85%), Positives = 505/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMRTHGA+QQREAVKR  R QLEPVFEAL+TLGNTKWR+NKR+  V+DRIWA GG
Sbjct: 483  FLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGG 542

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
                             DTED A++R WKWK+K+ KK NSERHSQRCDIELKLAVARKMK
Sbjct: 543  CLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMK 602

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ FFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG  GL WLKIH+ANL+
Sbjct: 603  DEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLF 662

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS++GR+TFTENHLDDIFDSADRPLEG+RWWL AEDPFQ LAACINLSEALRSS
Sbjct: 663  AGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSS 722

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTIS++PVHQDGSCNGLQHYAALGRD+LGA AVNLVAG+KPADVYSGIAARVL+IM+
Sbjct: 723  SPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMK 782

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDAEKDPA  P+ALRAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 783  RDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIAD 842

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELFGA+CYAAK+TLTALGEMFQAARSIMSWLGDCAK+IASEN  VRWTTPLGLPVVQP
Sbjct: 843  DVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQP 902

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQVLTLQRET+ +MVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN
Sbjct: 903  YRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 962

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNR+LREKFV+LYETPILENLLE F+QSFP L FPPLPERGDF
Sbjct: 963  FAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDF 1022

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 1023 DLREVLESPYFFN 1035


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  973 bits (2514), Expect = 0.0
 Identities = 468/553 (84%), Positives = 504/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWRVNKRVL ++DRIWASGG
Sbjct: 441  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGG 500

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED  EI+ WKWK+KAAKKEN ERHSQRCDIELKLAVARKMK
Sbjct: 501  RLADLVDREDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMK 560

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGK GL+WLKIH+AN+Y
Sbjct: 561  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVY 620

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GR  F+ENH++DIFDSADRPLEGRRWWLGAEDPFQCLA CIN+SEALRS 
Sbjct: 621  GGGVDKLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSP 680

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET+IS+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 681  SPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 740

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA+KDPAT+PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RGAI D
Sbjct: 741  RDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIED 800

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA EN  VRWTTPLGLPVVQP
Sbjct: 801  DNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQP 860

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI CK+AGL+
Sbjct: 861  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLS 920

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 921  FAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 980

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 981  DLREVLESPYFFN 993


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  970 bits (2508), Expect = 0.0
 Identities = 464/553 (83%), Positives = 502/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWRVN++VL ++DRIWASGG
Sbjct: 450  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGG 509

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 510  RLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 569

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG  GL+WLKIH+AN+Y
Sbjct: 570  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVY 629

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENHL+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 630  GGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 689

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 690  SPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 749

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK RG I D
Sbjct: 750  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIED 809

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 810  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 869

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 870  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 929

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 930  FAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 989

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 990  DLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  970 bits (2508), Expect = 0.0
 Identities = 464/553 (83%), Positives = 502/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWRVN++VL ++DRIWASGG
Sbjct: 163  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGG 222

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 223  RLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 282

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG  GL+WLKIH+AN+Y
Sbjct: 283  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVY 342

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENHL+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 343  GGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 402

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 403  SPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 462

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK RG I D
Sbjct: 463  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIED 522

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 523  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 582

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 583  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 642

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 643  FAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 702

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 703  DLREVLESPYFFN 715


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  970 bits (2507), Expect = 0.0
 Identities = 467/553 (84%), Positives = 505/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWRVNKRVL ++DRIWASGG
Sbjct: 441  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGG 500

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTE+  EI+ WKWK+KAAKKEN ERHSQRCDIELKLAVARKMK
Sbjct: 501  RLADLVDREDVPLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMK 560

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGK GL+WLKIH+AN+Y
Sbjct: 561  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVY 620

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GR  F+ENH++DIFDSADRPLEGRRWWLGAEDPFQCLA CI++SEALRS 
Sbjct: 621  GGGVDKLSCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSP 680

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET+IS+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 681  SPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 740

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA+KDPAT+PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RGAI D
Sbjct: 741  RDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIED 800

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA EN  VRWTTPLGLPVVQP
Sbjct: 801  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQP 860

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK+AGL+
Sbjct: 861  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLS 920

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 921  FAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 980

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 981  DLREVLESPYFFN 993


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  968 bits (2503), Expect = 0.0
 Identities = 463/553 (83%), Positives = 502/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWRVN++VL +++RIWASGG
Sbjct: 450  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGG 509

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEIR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 510  RLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 569

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG  GL+WLKIH+AN+Y
Sbjct: 570  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVY 629

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENHL+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 630  GGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 689

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 690  SPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 749

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK RG I D
Sbjct: 750  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIED 809

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 810  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 869

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 870  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 929

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 930  FAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 989

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 990  DLREVLESPYFFN 1002


>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
          Length = 983

 Score =  965 bits (2494), Expect = 0.0
 Identities = 460/553 (83%), Positives = 505/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKRT + +LEP+F+AL+TLGNTKWRVNKR+LSV+DRIWA+GG
Sbjct: 431  FLPSYMMRTHGAKQQREAVKRTPKQELEPIFQALNTLGNTKWRVNKRILSVVDRIWANGG 490

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AEI+ WKWK+KA KK NSERHSQRCDIELKLAVARK+K
Sbjct: 491  RLADLVDREDLPLPEEPDTEDEAEIKKWKWKVKAVKKVNSERHSQRCDIELKLAVARKIK 550

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            +EE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GLQWLK+H+ANLY
Sbjct: 551  EEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKVHLANLY 610

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDK S DGR++FTENH++DIFDSADRPLEG+RWWLGAEDPFQCLA C++L+EALRS 
Sbjct: 611  GGGVDKFSYDGRISFTENHMEDIFDSADRPLEGKRWWLGAEDPFQCLATCMSLTEALRSP 670

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
             PE+T+SY+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 671  YPESTVSYIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMK 730

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R ++ D
Sbjct: 731  RDAAKDPADDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASMED 790

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            +TELF  +CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA+ENH VRWTTPLGLPVVQP
Sbjct: 791  DTELFACACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIATENHPVRWTTPLGLPVVQP 850

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRH+IKTSLQVLTLQRETDKVM KRQRTAFPPNFVHSLDGSHMMMTAIAC +AGL+
Sbjct: 851  YRKLGRHMIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACSEAGLS 910

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD+MN ILREKFVELYE PILENLL+ F+QSFP L FPPLPERGDF
Sbjct: 911  FAGVHDSYWTHACDVDKMNEILREKFVELYEAPILENLLDGFQQSFPKLKFPPLPERGDF 970

Query: 821  DLREVLESTYFFN 783
            DLREVL+STYFFN
Sbjct: 971  DLREVLDSTYFFN 983


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 949

 Score =  964 bits (2493), Expect = 0.0
 Identities = 470/553 (84%), Positives = 503/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGAKQQREAVKR  ++QL+PVFEAL+TLG+TKWRVNKRVL VID+IWA+GG
Sbjct: 397  FLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGG 456

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DT+D AEIR WKWK+KA KKEN+ERHSQRCDIELKLAVARKMK
Sbjct: 457  RLADLVDRENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMK 516

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGK GL WLKIH+ANLY
Sbjct: 517  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLY 576

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS DGR+ FTENHLDDIFDSADRPLEG+RWWL AEDPFQCLAAC NLSEALRS 
Sbjct: 577  AGGVDKLSYDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSP 636

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            +PETTIS+MPVHQDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYSGIAARVLEIM+
Sbjct: 637  TPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMK 696

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDAEKDP T PNAL AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 697  RDAEKDPQTNPNALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIED 756

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF ASCYAA+ TLTAL EMF+AARSIMSWLGDCAKVIAS N AV+W TPLGLPVVQP
Sbjct: 757  DVELFAASCYAARTTLTALEEMFEAARSIMSWLGDCAKVIASTNQAVQWITPLGLPVVQP 816

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR+FGRHLIKTSLQ+LTLQRET+KVMVKRQRTAFPPNFVHSLDGSHMMMT +ACKKAGLN
Sbjct: 817  YRQFGRHLIKTSLQILTLQRETNKVMVKRQRTAFPPNFVHSLDGSHMMMTTVACKKAGLN 876

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELY+ PILENLLE F+++FP L+FPPLPERGDF
Sbjct: 877  FAGVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALNFPPLPERGDF 936

Query: 821  DLREVLESTYFFN 783
            DL+EVLESTYFFN
Sbjct: 937  DLQEVLESTYFFN 949


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  962 bits (2487), Expect = 0.0
 Identities = 460/553 (83%), Positives = 500/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWR+N++VL ++DRIWASGG
Sbjct: 450  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                D ED A+IR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 510  RLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 569

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+AN+Y
Sbjct: 570  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 629

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENH++DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 630  GGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 689

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 690  SPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMK 749

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RG I D
Sbjct: 750  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIED 809

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 810  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 869

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 870  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 929

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 930  FAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 989

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 990  DLREVLESPYFFN 1002


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  962 bits (2487), Expect = 0.0
 Identities = 460/553 (83%), Positives = 500/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWR+N++VL ++DRIWASGG
Sbjct: 450  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                D ED A+IR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 510  RLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 569

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+AN+Y
Sbjct: 570  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 629

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENH++DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 630  GGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 689

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 690  SPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMK 749

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RG I D
Sbjct: 750  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIED 809

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 810  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 869

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 870  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 929

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 930  FAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 989

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 990  DLREVLESPYFFN 1002


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  962 bits (2487), Expect = 0.0
 Identities = 460/553 (83%), Positives = 500/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSY+MRTHGAKQQREAVKR  + QLEPVF+ALDTLGNTKWR+N++VL ++DRIWASGG
Sbjct: 450  FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                D ED A+IR WKWK+K  KKEN ERHSQRCDIELKLAVARKMK
Sbjct: 510  RLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMK 569

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DE+ F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+AN+Y
Sbjct: 570  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 629

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
             GGVDKLS +GRV F+ENH++DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALRS 
Sbjct: 630  GGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSP 689

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET ISYMP+HQDGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVL+IM+
Sbjct: 690  SPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMK 749

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RG I D
Sbjct: 750  RDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIED 809

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTALGEMF+AARSIMSWLGDCAK+IA ENH VRWTTPLGLPVVQP
Sbjct: 810  DNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQP 869

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+
Sbjct: 870  YRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLS 929

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLLE F+QSFP L FPPLPERGDF
Sbjct: 930  FAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDF 989

Query: 821  DLREVLESTYFFN 783
            DLREVLES YFFN
Sbjct: 990  DLREVLESPYFFN 1002


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  961 bits (2485), Expect = 0.0
 Identities = 462/553 (83%), Positives = 505/553 (91%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMRTHGA+QQREAVK T R QL+PVFEALDTLG+TKWR+NKR+L V+DRIW SGG
Sbjct: 37   FLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVDRIWNSGG 96

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                +TED A +R WKWKL+AAKKEN ERHSQRCD ELKLAVARKMK
Sbjct: 97   RLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKLAVARKMK 156

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKIH+ANL+
Sbjct: 157  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLF 216

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS DGR+ FTENHLDDIFDSADRPLEG+RWWL AEDPFQCLA CI+L+EALRSS
Sbjct: 217  AGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSS 276

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET IS++P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIA RVL+IMR
Sbjct: 277  SPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMR 336

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            +DA+KDP   P+AL A++LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RG I D
Sbjct: 337  KDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIAD 396

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            +TE+F ASCYAAKVTLTALGEMF+AARSIMSWLG+CAK+IASEN  VRWTTPLGLPVVQP
Sbjct: 397  DTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQP 456

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR FGRHLIKTSLQVLTLQ+ET+KVMVKRQRTAFPPNFVHSLDGSHMMMTA+ CK+AGLN
Sbjct: 457  YRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGLN 516

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD+MNRILREKFVELYETP+LENLLE F+QSFPTLSFPPLPERGDF
Sbjct: 517  FAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDF 576

Query: 821  DLREVLESTYFFN 783
            DL++VL+S YFFN
Sbjct: 577  DLQDVLKSPYFFN 589


>ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 957

 Score =  961 bits (2484), Expect = 0.0
 Identities = 470/553 (84%), Positives = 501/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGAKQQREAVKR  ++QL+PVFEAL+TLGNTKWRVNKRVL VID+IWA+GG
Sbjct: 405  FLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGNTKWRVNKRVLCVIDQIWANGG 464

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DT D AEIR WKWK+KA KKENSERHSQRCDIELKLAVARKMK
Sbjct: 465  RLADLVDRENVPSPKEPDTIDEAEIRKWKWKVKAVKKENSERHSQRCDIELKLAVARKMK 524

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGK GL+WLKIH+ANLY
Sbjct: 525  DEEAFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLY 584

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS DGR++FTENHLDDIFDSADRPLEG+ WWL AEDPFQCLAACINLSEALRS 
Sbjct: 585  AGGVDKLSYDGRISFTENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACINLSEALRSP 644

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            +PETTIS+MPVHQDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYSGIAARVLEIM+
Sbjct: 645  TPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMK 704

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDAEKDP T PNAL AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK R AI D
Sbjct: 705  RDAEKDPRTNPNALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIED 764

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF ASCYAAK TLTAL EMF+AARSIM WLGDCAKVIA+ N AVRW TPLGLPVVQP
Sbjct: 765  DVELFAASCYAAKTTLTALEEMFEAARSIMGWLGDCAKVIAATNQAVRWITPLGLPVVQP 824

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR+FGRHLIKTSLQ+LTLQRET+KVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACKKAGLN
Sbjct: 825  YRQFGRHLIKTSLQILTLQRETNKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 884

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELY+ PILENLLE F+++FP L+FPPLPERGDF
Sbjct: 885  FAGVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALNFPPLPERGDF 944

Query: 821  DLREVLESTYFFN 783
            DL+EVL S YFFN
Sbjct: 945  DLQEVLGSAYFFN 957


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  958 bits (2476), Expect = 0.0
 Identities = 461/553 (83%), Positives = 499/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGA+QQREA+KRT R QLEPVF+ALD LGNT+WRVNKRVLSV+DRIWASGG
Sbjct: 472  FLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGG 531

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
                             DTED   ++ WKWK+K+ KKEN ERHSQRCD ELKLAVARKMK
Sbjct: 532  HLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMK 591

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGK GL WLKIH+ANLY
Sbjct: 592  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLY 651

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS +GR+ FTENHLDDIFDS D+PLEGRRWWL AEDPFQCLA CINL+EALRSS
Sbjct: 652  AGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSS 711

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPET IS++PVHQDGSCNGLQHYAALGRDKLGAA+VNLV G+KPADVYSGIA RVLEIMR
Sbjct: 712  SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMR 771

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            RDA+KDP   P ALRA+LLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK RG+I+D
Sbjct: 772  RDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISD 831

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + E+FG +CYAAK+TLTALGEMF+AAR IMSWLG+CAK+IASEN  VRWTTPLGLPVVQP
Sbjct: 832  DAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQP 891

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRKFGRHLIKTSLQVLTLQRET+KVMVKRQRTAFPPNFVHSLD SHMMMTAIACKKAGL+
Sbjct: 892  YRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLS 951

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMN+ILREKFV+LYETPILENLLE F+QSFP L+FPPLPERGDF
Sbjct: 952  FAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDF 1011

Query: 821  DLREVLESTYFFN 783
            DLR+VLES YFFN
Sbjct: 1012 DLRDVLESPYFFN 1024


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  957 bits (2475), Expect = 0.0
 Identities = 460/553 (83%), Positives = 500/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMRTHGA+QQREAVKR  R Q++ VFEAL+TLG+TKWRVNKRVLS++DRIW+SGG
Sbjct: 424  FLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGG 483

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED   I++WKW L++ KKENSERHSQRCD+ELKLAVARKMK
Sbjct: 484  RLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMK 543

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL WLKIH+ANLY
Sbjct: 544  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY 603

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS DGRV FTENHL++IFDSADRPLEG+RWWLGAEDPFQCLA C+NL+EALRSS
Sbjct: 604  AGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSS 663

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            SPETTIS++PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVY+GIA RVLEIMR
Sbjct: 664  SPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMR 723

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
             DA+KDP+ +P+  RARL+++QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLK RG I D
Sbjct: 724  MDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPD 783

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            E ELFGASCYAAKVTLTALGEMFQAAR IM+WLGDCAKVIA EN  VRWTTPLGLPVVQP
Sbjct: 784  EAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQP 843

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YRK GRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK+ GLN
Sbjct: 844  YRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLN 903

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVD MN+ILREKFVELY+TPILENLLE F +SFP L FPPLPERGDF
Sbjct: 904  FAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDF 963

Query: 821  DLREVLESTYFFN 783
            D++EVLES YFFN
Sbjct: 964  DMKEVLESPYFFN 976


>ref|XP_007156393.1| hypothetical protein PHAVU_003G282700g [Phaseolus vulgaris]
            gi|561029747|gb|ESW28387.1| hypothetical protein
            PHAVU_003G282700g [Phaseolus vulgaris]
          Length = 959

 Score =  956 bits (2471), Expect = 0.0
 Identities = 465/553 (84%), Positives = 499/553 (90%)
 Frame = -2

Query: 2441 FLPSYVMRTHGAKQQREAVKRTSRTQLEPVFEALDTLGNTKWRVNKRVLSVIDRIWASGG 2262
            FLPSYVMR HGAKQQREAVKR ++ QL+PVFEAL+TLG+TKWRVNKRVL V+D+IWA+GG
Sbjct: 407  FLPSYVMRIHGAKQQREAVKRATKNQLDPVFEALNTLGSTKWRVNKRVLCVMDQIWANGG 466

Query: 2261 RXXXXXXXXXXXXXXXXDTEDAAEIRSWKWKLKAAKKENSERHSQRCDIELKLAVARKMK 2082
            R                DTED AE+R WKWK+K  KKEN+ERHSQRCDIELKLAVARKMK
Sbjct: 467  RLADLVDRDDVPLPEEPDTEDEAEVRKWKWKVKTVKKENNERHSQRCDIELKLAVARKMK 526

Query: 2081 DEEWFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKLGLQWLKIHIANLY 1902
            DEE F+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL WLKIH+ANLY
Sbjct: 527  DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY 586

Query: 1901 AGGVDKLSNDGRVTFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAACINLSEALRSS 1722
            AGGVDKLS + R+ FTENHLDDIFDSADRPLEG RWWL AEDPFQCLAAC+NLSEALRS 
Sbjct: 587  AGGVDKLSYNDRIAFTENHLDDIFDSADRPLEGNRWWLQAEDPFQCLAACMNLSEALRSP 646

Query: 1721 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1542
            +PETTIS+MPVHQDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYSGIAARVLEIM+
Sbjct: 647  NPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVCGDQPADVYSGIAARVLEIMK 706

Query: 1541 RDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKGRGAITD 1362
            +DAEKDP T PNAL AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQ+K+RLK R AI D
Sbjct: 707  KDAEKDPQTSPNALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQMKKRLKERCAIED 766

Query: 1361 ETELFGASCYAAKVTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQP 1182
            + ELF A+CYAAK TLTAL EMF+AARSIM WLGDCAKVIAS N AVRW TPLGLPVVQP
Sbjct: 767  DVELFTAACYAAKTTLTALEEMFEAARSIMDWLGDCAKVIASTNQAVRWITPLGLPVVQP 826

Query: 1181 YRKFGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 1002
            YR+ GRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACKKAGLN
Sbjct: 827  YRQLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 886

Query: 1001 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEEFRQSFPTLSFPPLPERGDF 822
            FAGVHDSYWTHACDVDEMNRILREKFVELYE PILENL E F+++FPTL+FPPLP RGDF
Sbjct: 887  FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLSESFQKNFPTLNFPPLPARGDF 946

Query: 821  DLREVLESTYFFN 783
            DLREVLESTYFFN
Sbjct: 947  DLREVLESTYFFN 959