BLASTX nr result

ID: Cocculus22_contig00002946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00002946
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001182879.1| uncharacterized protein LOC100501151 [Zea ma...    59   9e-07
ref|XP_006343174.1| PREDICTED: microtubule-associated protein 70...    58   1e-06
ref|XP_006343173.1| PREDICTED: microtubule-associated protein 70...    58   1e-06
ref|XP_004239261.1| PREDICTED: microtubule-associated protein 70...    56   5e-06

>ref|NP_001182879.1| uncharacterized protein LOC100501151 [Zea mays]
           gi|238007930|gb|ACR35000.1| unknown [Zea mays]
          Length = 112

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +3

Query: 183 PLRNMFLPGRN*ELFVGPLELPSRFALLSCSFSTRMAATSFSIAATS 323
           PL    LPG + EL   PLELP R ALLSCSFS R AA+SFSIAA+S
Sbjct: 34  PLLGKVLPGGSCELLAEPLELPKRLALLSCSFSKRTAASSFSIAASS 80


>ref|XP_006343174.1| PREDICTED: microtubule-associated protein 70-2-like isoform X2
           [Solanum tuberosum]
          Length = 622

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -1

Query: 277 KEQDNRAKRLGNSKGPTNSSQFLPGRNILRSG 182
           KEQ+NRAKRLGNSKGP NSSQ LPGR++ RSG
Sbjct: 586 KEQENRAKRLGNSKGPVNSSQLLPGRSVTRSG 617


>ref|XP_006343173.1| PREDICTED: microtubule-associated protein 70-2-like isoform X1
           [Solanum tuberosum]
          Length = 651

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -1

Query: 277 KEQDNRAKRLGNSKGPTNSSQFLPGRNILRSG 182
           KEQ+NRAKRLGNSKGP NSSQ LPGR++ RSG
Sbjct: 615 KEQENRAKRLGNSKGPVNSSQLLPGRSVTRSG 646


>ref|XP_004239261.1| PREDICTED: microtubule-associated protein 70-1-like [Solanum
           lycopersicum]
          Length = 622

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -1

Query: 277 KEQDNRAKRLGNSKGPTNSSQFLPGRNILRSG 182
           KEQ+NRA RLGNSKGP NSSQ LPGR++ RSG
Sbjct: 586 KEQENRANRLGNSKGPVNSSQLLPGRSVARSG 617


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