BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00002943
         (2285 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...  1104   0.0  
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1088   0.0  
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1083   0.0  
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...  1069   0.0  
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...  1057   0.0  
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]     1042   0.0  
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]     1042   0.0  
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...  1032   0.0  
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A...  1018   0.0  
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]      1016   0.0  
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...  1016   0.0  
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1015   0.0  
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1014   0.0  
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...  1008   0.0  
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...  1008   0.0  
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...  1006   0.0  
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1006   0.0  
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...  1006   0.0  
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...  1004   0.0  
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...  1004   0.0  

>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 553/758 (72%), Positives = 623/758 (82%)
 Frame = -1

Query: 2276 YFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYMES 2097
            YFK+A +DQWVR IDFT S  IGQS A+CLELP   + P   R+NF YYKE++G F +ES
Sbjct: 190  YFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLP-NFRENFAYYKENDGKFILES 248

Query: 2096 GSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPSA 1917
            GSS+SH+L LVPI+ PP G  LP+ IL  +N+LVQ+GCL+G TLD +FF  V+P+  P +
Sbjct: 249  GSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFRLVDPERFPIS 308

Query: 1916 YIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPSK 1737
            +IEHALEKLYHL ECCYEPV+WL EQY  Y       G+P+ISLD GLVY+RRV ITP K
Sbjct: 309  FIEHALEKLYHLKECCYEPVRWLSEQYRTY-VKKPVAGSPAISLDTGLVYVRRVQITPCK 367

Query: 1736 VYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIYR 1557
            VYF GPE+NVSNRVLR++ EDIDNF+R+SF+DE+ E++HST +SPR     E R T +YR
Sbjct: 368  VYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPR--MSKEGRRTGVYR 425

Query: 1556 RILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVA 1377
            RILS+L NGIVIGDKKFDFLAFSSSQLRDNSAWMFAS+ GLTAA IR WMGDF +IRNVA
Sbjct: 426  RILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVA 485

Query: 1376 KYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAKKC 1197
            KYAARLGQSFSSSKETL V + EI  IPDIEI      YVFSDGIGKIS   A +VA KC
Sbjct: 486  KYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKC 545

Query: 1196 AIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPCFL 1017
              +SS PSAFQIRYGGYKGVVAVDPTS +KLSLR+SM KY S N  LDVL+WSK+QP FL
Sbjct: 546  GCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFL 605

Query: 1016 NRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEMLM 837
            NRQLITLLSTLGVKD++FEKKQ+  VDQL+  L DPV+AQEALE+MSPGEN NVLKEMLM
Sbjct: 606  NRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLM 665

Query: 836  CGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQVS 657
            CGYKPDAEPFLSMMLQ FRA KLLELR KTRIFVPNGRSMMGCLDETRTLEY +VF+Q+S
Sbjct: 666  CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 725

Query: 656  CIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHMVD 477
              G +Q  G    + R + S    FILEGK+VVAKNPCLHPGDVRVL AV+V  LHHMVD
Sbjct: 726  GTGGRQSFGD-SLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVD 784

Query: 476  CVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQIE 297
            CVVFPQKGKRPHPNECSGSDLDGDIYFV WD +LIPP QI PMDYTPAP  V+DHDV IE
Sbjct: 785  CVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIE 844

Query: 296  EVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPAQI 117
            EV+EYF NY+VNDSLGIIANAHTVFAD+E  KA  D C ELA+LFSIAVDFPKTGVPA+I
Sbjct: 845  EVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEI 904

Query: 116  PPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            P +L VKEYPDFM+K DKPTYES+ VIGKLFREVKDIA
Sbjct: 905  PRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIA 942


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 537/761 (70%), Positives = 627/761 (82%), Gaps = 2/761 (0%)
 Frame = -1

Query: 2279 DYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYME 2100
            ++FK+  +DQWVR  DFT S  IGQS+ +C+ELP   E P   ++NF YYKE E  F +E
Sbjct: 199  NFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELP-DFKENFAYYKESEDRFVLE 257

Query: 2099 SGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPS 1920
            +GS++S SLDLVPI+ PP GI LPY+IL  +N LVQ+GC+AG  LD+ F+  V+P   P 
Sbjct: 258  TGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPV 317

Query: 1919 AY--IEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAIT 1746
            +   IEHAL+KLYHL ECCYEP +WL +QY KY TS     +P+ISLDDGLVY+ RV +T
Sbjct: 318  SISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVT 377

Query: 1745 PSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTR 1566
            PS+VYF GPEINVSNRVLRHF  DIDNF+RISF+DED +++HSTDLSPR    ++   TR
Sbjct: 378  PSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTR 437

Query: 1565 IYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIR 1386
            IY RILS L NGI+IGD+KF+FLAFSSSQLR++SAWMFAS+ GLTAA IREWMG+F EIR
Sbjct: 438  IYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIR 497

Query: 1385 NVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVA 1206
            NVAKYAARLGQSFSSSKETL+V   EI +IPD++I+    KYVFSDGIGK+SA+FARKVA
Sbjct: 498  NVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVA 557

Query: 1205 KKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQP 1026
             KC ++ + PSAFQIRYGGYKGVVA DPTS KKLSLR+SM KY S+  KLDVL+WSK+QP
Sbjct: 558  SKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQP 617

Query: 1025 CFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKE 846
            CFLNRQLI+LLSTLG+ D IFEKKQ+E V QL+  LTDP+ AQEALE+MSPGEN N+LKE
Sbjct: 618  CFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKE 677

Query: 845  MLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFI 666
            +L+CGYKPDAEPFLSMMLQ FRA KLLELR KTRIF+PNGRSMMGCLDETRTL Y QVF+
Sbjct: 678  LLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFV 737

Query: 665  QVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHH 486
            Q+S  G +Q  G    L  ++ S QR FI++G VVVAKNPCLHPGDVRVL+AV+V  LHH
Sbjct: 738  QISGAGYRQLHGE-SSLFSSSRSRQR-FIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHH 795

Query: 485  MVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDV 306
            MVDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIPP Q  PMDYTPA  + +DHDV
Sbjct: 796  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDV 855

Query: 305  QIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVP 126
            QIE+V+EYF NY+VNDSLGIIANAHTVFAD+E  KA S+ C++LA  FSIAVDFPKTGVP
Sbjct: 856  QIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVP 915

Query: 125  AQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            A+IPPHLYVKEYPDFM+K DKPTYES++VIGKLFR VKDIA
Sbjct: 916  AEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIA 956


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score = 1083 bits (2801), Expect = 0.0
 Identities = 543/760 (71%), Positives = 623/760 (81%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            L YFK+  +DQWVR IDFT S SIGQSSA+CLELP   + P    +NF  YKE++  F +
Sbjct: 186  LSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLP-NFCENFARYKENDRKFIL 244

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            ESG+SFS +L LVPI+ PP G  LP+ IL  +N+LVQ+GCL+G TLD  FF  V+PQ I 
Sbjct: 245  ESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRIN 304

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
             ++IEHALEKLY+L ECCYEPV+WL EQY  Y  S    G+P+ISLD GLVY+RRV ITP
Sbjct: 305  ISFIEHALEKLYYLEECCYEPVRWLHEQYRTY-ISKQVAGSPAISLDTGLVYVRRVQITP 363

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
             KVYF GPE+NVSNRVLR++ EDIDNF+R+SF+DE+ E++HST +SPR    +E R T +
Sbjct: 364  CKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPR--MSNEGRRTGV 421

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            YRRILS+L NGIVIGDKKFDFLA SSSQLRDNSAWMFAS+ GLTAA IR  MGDF +IRN
Sbjct: 422  YRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRN 481

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSFSSSKETL V +HEI +IPDIE   +G  YVFSDGIGKISA+ A +VA 
Sbjct: 482  VAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAI 541

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC  ++S PSAFQIRYGGYKGVVAVDPTS +KLSLR+SM KY S+N  LDVLSWSK++PC
Sbjct: 542  KCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPC 601

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTLGVKD++FEKKQ+E VDQL+  L DP+ AQEALE+MSPGEN N+LKEM
Sbjct: 602  FLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEM 661

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            LMCGYKPDAEPFLSMMLQ FRA KLLELR KTRIFVPNGRSMMGCLDETRTLEY +VF+Q
Sbjct: 662  LMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQ 721

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
            +S  G +Q  G    +   + S    FILEGKVVVAKNPCLHPGDVR+L AVDV  LHHM
Sbjct: 722  ISGTGGRQSFGD-SLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHM 780

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFV WD +LIPP QI PMDYTPAP  V+DHDV 
Sbjct: 781  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 840

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEV+EYF NY+ ND LGIIANAHTVFAD+E  KA    C ELA+LFSIA++FPKTGVPA
Sbjct: 841  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 900

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IP HL+VKEYPDFM+K +KPTYES+ VIGKLFREVKD+A
Sbjct: 901  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVA 940


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 539/760 (70%), Positives = 617/760 (81%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            L+YF D  +DQWVR  DFT S  IGQSS +CLELP   + P   R+NF YYKE EG F +
Sbjct: 195  LNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLP-NFRENFAYYKESEGKFVL 253

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            ESGSS+S +L+LVPI+ P  GI+LPY+IL  +N LVQ+GC+ G  LDA F+  VNP  I 
Sbjct: 254  ESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPALDANFYRLVNPCRID 313

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
              YI+HALEKLY+L ECC+EP KWL EQY  Y  S  + G+P ISLDDGLV +RRV ITP
Sbjct: 314  KVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITP 373

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
            S+VYF GPEINVSNRVLRHFH+DIDNF+RI+FVDE+ E++HSTDL  R      +R T I
Sbjct: 374  SRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLLTR------NRITEI 427

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            Y RILS L NGIVIGDK+F+FLAFSSSQLR+NSAWMFAS++GLTAA IR WMG+F +IRN
Sbjct: 428  YGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRN 487

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSFSSS ETL+V + EI +I D+EI+ +G  YVFSDGIGKISA FA+KVA 
Sbjct: 488  VAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAA 547

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC +    PSAFQIR GG+KGVVAVDPTS KKLSLR SM KY S+N KLDVL+WSK+QPC
Sbjct: 548  KCRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPC 607

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTLGV D+ FE+KQ+EVVDQLN  LTDP+ AQEALE+MSPGEN N+LKEM
Sbjct: 608  FLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEM 667

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L+CGY+PDAEPFLSMMLQ FRA KLLELR K+RIFV NGRSMMGCLDETRTL+Y QVF+Q
Sbjct: 668  LLCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQ 727

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
            VS                 + SEQR FI++GKVVVAKNPCLHPGDVRVL AV+V +LHHM
Sbjct: 728  VS----------------GSRSEQR-FIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHM 770

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIP  QI PMDY+PAP   ++H+V 
Sbjct: 771  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVT 830

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEV+EYF NY+VNDSLGIIANAHTVFAD+E RKA S  C  LA+LFSIAVDFPKTGVPA
Sbjct: 831  IEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPA 890

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IP  L VKEYPDFM+K DKPTY+S +VIGKLFREVKD+A
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLA 930


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 522/760 (68%), Positives = 616/760 (81%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            L+YF+D  ++QWVR  DFT S  IG SS++CLELP + + P    +NF YYKE+EG F +
Sbjct: 196  LNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLP-NFNENFFYYKENEGTFVL 254

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            ESG +FS + DLVPI+ P  G+ LPY+IL  VN LVQ+GCLAG+ LD  F+  V+P  +P
Sbjct: 255  ESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMP 314

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
               IE+ALEKLYHL ECCYEP KW +EQY KY TS +   +P +SLD GLVY+ +V ITP
Sbjct: 315  VRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITP 374

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
             KV+F GPE+NVSNRVLR + EDIDNF+R+SFVDE+ E++HSTD+SPR   ++E R T I
Sbjct: 375  CKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAI 434

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            Y RILS L NGIVIGDKKF+FLAFSSSQLR+NS WMFAS+ GLTAA IR WMG FH+IRN
Sbjct: 435  YNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRN 494

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VA+YAARLGQSF SS ETL+V  HEI +IPDIE+   G +Y+FSDGIGKISA+FARKVA 
Sbjct: 495  VARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAI 554

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC  +   PSAFQIRY GYKGVVAVDPTS KKLSLR SM KY S+N KLDVL+ SK+QPC
Sbjct: 555  KCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPC 614

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTLGV D+ FE+KQ+E VDQL+  LTDP+ AQEALE+MSPGEN N+LKEM
Sbjct: 615  FLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEM 674

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L+CGY+PDAEPFLSMMLQ FRA KLLELR KTRIF+PNGRSMMGCLDETRTLE+ QVF++
Sbjct: 675  LLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVK 734

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S  G++    +    + +     + ++++G VVVAKNPCLHPGD+R+L+AVDV  LHHM
Sbjct: 735  FS--GSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHM 792

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIP  QI PMDYTP PP+ +DHDV 
Sbjct: 793  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVT 852

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEV+EYF NY+VNDSLG+IANAHT  AD+E  KA S+ CVELAR FSIAVDFPKTGVPA
Sbjct: 853  IEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPA 912

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IP +L  +EYPDFM+K DKP+YES++VIGKLFREVKDIA
Sbjct: 913  EIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIA 952


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 1042 bits (2695), Expect = 0.0
 Identities = 520/760 (68%), Positives = 611/760 (80%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            L+YFKD  +DQWVR  DFT S  IGQSS + LELP N + P   R+NF YYKE+EG   +
Sbjct: 195  LNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLP-NFRENFAYYKENEGRLVL 253

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            ESGSS+S +L LVPI+ P   I+LP++IL  VN LVQ+GC+ G  LD  F+  V+P  + 
Sbjct: 254  ESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMH 313

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
              YI+HALEKLY+L ECCYEP +WL E+Y  +  S  + G+P+ISLD+GLVY+RRV ITP
Sbjct: 314  KVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITP 373

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
            S+VYF GPEINVSNRVLR FH DIDNF+RISFVDE+ E++HST++  R       R T I
Sbjct: 374  SRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQAR------GRRTGI 427

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            Y+RILS L NGIVIG+K+F+FLAFSSSQLR+NSAWMFAS+ GLTAA IR WMG+F +IRN
Sbjct: 428  YKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRN 487

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSFSSS ETL+V + EI +IPDIEI  +G KYVFSDGIGKISA+FA+KVA 
Sbjct: 488  VAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAA 547

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC ++   PSAFQIR GG+KGVVA+DPTS  KLSLR+SM KY S+N KLDVL+WSK+QPC
Sbjct: 548  KCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPC 607

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTLGV D  FEKKQ+EVVDQLN  LTDP+ AQEALE+MSPGEN N+LKEM
Sbjct: 608  FLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEM 667

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L+CGYKPDAEPFLSMML+ FRA KLLELR K RIFV  GRSMMGCLDETRTL Y QVF+Q
Sbjct: 668  LLCGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ 727

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S                  +  +R FI++GKV+VAKNPCLHPGDVRVL+AV+V +LHHM
Sbjct: 728  FS-----------------GSRSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHM 770

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGD+YFV WDPELIP  QI+PMDY+PA    +DH+V 
Sbjct: 771  VDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVT 830

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEE++EYF NY+VNDSLGII+NAHT FAD+E  KA S  C+ELA+LFSIAVDFPKTGVPA
Sbjct: 831  IEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPA 890

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IP  L VKEYPDFM+K DKP+Y+S +VIGKLFREVK++A
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLA 930


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 1042 bits (2694), Expect = 0.0
 Identities = 519/760 (68%), Positives = 611/760 (80%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            L+YFKD  +DQWVR  DFT S  IGQSS +CLELP N + P   R+NF YYKE+EG   +
Sbjct: 195  LNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLP-NFRENFAYYKENEGRLVL 253

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            ESGSS+S +L LVPI+ P   I+LP++IL  VN LVQ+GC+ G  LD  F+  V+P  + 
Sbjct: 254  ESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMH 313

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
              YI+HALEKLY+L ECCYEP +WL E+Y  +  S  + G+P+ISLD+GLVY+RRV ITP
Sbjct: 314  KVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITP 373

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
            S+VYF GPEINVSNRVLR FH DIDNF+RISFVDE+ E++HST++  R       R T I
Sbjct: 374  SRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQAR------GRRTGI 427

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            Y+RILS L NGIVIG+K+F+FLAFSSSQLR+NSAWMFAS+ GLTAA IR WMG+F +IRN
Sbjct: 428  YKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRN 487

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSFSSS ETL+V + EI +IPDIEI  +G KYVF DGIGKISA+FA+KVA 
Sbjct: 488  VAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAA 547

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC ++   PSAFQIR GG+KGVVA+DPTS  KLSLR+SM KY S+N KLDVL+WSK+QPC
Sbjct: 548  KCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPC 607

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTLGV D  FEKKQ+EVVDQLN  LTDP+ AQEALE+MSPGEN N+LKEM
Sbjct: 608  FLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEM 667

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L+CGYKPDAEPFLSMML+ FRA KLLELR K RIFV  GRSMMGCLDETRTL Y QVF+Q
Sbjct: 668  LLCGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ 727

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S                  +  +R FI++GKV+VAKNPCLHPGDVRVL+AV+V +LHHM
Sbjct: 728  FS-----------------GSRSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHM 770

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGD+YFV WDPELIP  QI+PMDY+PA    +DH+V 
Sbjct: 771  VDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVT 830

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEE++EYF NY+VNDSLGII+NAHT FAD+E  KA S  C+ELA+LFSIAVDFPKTGVPA
Sbjct: 831  IEEIEEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPA 890

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IP  L VKE+PDFM+K DKP+Y+S +VIGKLFREVK++A
Sbjct: 891  EIPQELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKNLA 930


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
            gi|482575337|gb|EOA39524.1| hypothetical protein
            CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score = 1032 bits (2668), Expect = 0.0
 Identities = 516/762 (67%), Positives = 604/762 (79%), Gaps = 2/762 (0%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGP-FY 2106
            +D++ D  ++QW+R  DFT+S  IGQS+A CLELP +   P   R+NF  Y E     F 
Sbjct: 194  MDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHVHVP-DFRENFANYAEHRASTFL 252

Query: 2105 MESGSSFSHSLD-LVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQL 1929
            ++SGSS+S + + LVP++ PPPG +LP++IL  VN+LVQ+ CL G  LD  F+  +NP+ 
Sbjct: 253  IQSGSSYSSNANKLVPVVDPPPGFDLPFEILFKVNTLVQNACLPGPALDLEFYQLLNPKK 312

Query: 1928 IPSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAI 1749
               A I+H+LEKL+HL ECCYEP +WL E+Y K  +S     +P+ISLDDGLVYI RV +
Sbjct: 313  YDRALIDHSLEKLFHLGECCYEPARWLREEYKKLNSSKKLPLSPTISLDDGLVYIYRVLV 372

Query: 1748 TPSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCT 1569
            TP++VYF GPE+NVSNRVLRH+ E I+NF+RISFVDED E++HS DLSPR    S  R T
Sbjct: 373  TPARVYFLGPEVNVSNRVLRHYSEYINNFLRISFVDEDLEKIHSMDLSPRS---STQRRT 429

Query: 1568 RIYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 1389
            ++Y RI SVL +GIVIGDKKF+FLAFSSSQLR+NSAWMFA +D LTAA IR WMGDF  I
Sbjct: 430  KLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPRDRLTAAHIRAWMGDFDHI 489

Query: 1388 RNVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKV 1209
            RNVAKYAARLGQSFSSS+ETL VR  EI VIPD+E      +YVFSDGIGKISA+FARKV
Sbjct: 490  RNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEAMYLDTRYVFSDGIGKISAEFARKV 549

Query: 1208 AKKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQ 1029
            AKKC +    PSAFQIRYGGYKGVVAVDP S KKLSLR+SM K+ S N KLDVL+WSK+Q
Sbjct: 550  AKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESGNTKLDVLAWSKYQ 609

Query: 1028 PCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLK 849
            PC+LNRQ+ITLLSTLGVKDN+FEKKQ+EVVD+L+  LTDP+ A EAL +M+PGEN N+LK
Sbjct: 610  PCYLNRQIITLLSTLGVKDNVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILK 669

Query: 848  EMLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVF 669
            ++L+CGYKPDAEPFLSMMLQ FRA KLLELR KTRIF+P GRSMMGCLDETRTLEY QV 
Sbjct: 670  QLLLCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFIPGGRSMMGCLDETRTLEYGQVV 729

Query: 668  IQVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLH 489
            +Q S                N T   + +I+ G VVVAKNPCLHPGDVRVLQAV+V  L+
Sbjct: 730  VQYS----------------NPTMPGKRYIITGPVVVAKNPCLHPGDVRVLQAVNVPALY 773

Query: 488  HMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHD 309
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYF+ WD ELIPP   EPMDYTP P  ++DHD
Sbjct: 774  HMVDCVVFPQKGSRPHPNECSGSDLDGDIYFICWDHELIPPRTSEPMDYTPEPAQILDHD 833

Query: 308  VQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGV 129
            V IEEV+EYF NY+VNDSLGIIANAHT FAD+E  KA SD C+ELAR FSIAVDFPKTG+
Sbjct: 834  VTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGI 893

Query: 128  PAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             A+IP HLYVKEYPDFMDK DKPTYESK+VIGKLFREVK+ A
Sbjct: 894  AAEIPQHLYVKEYPDFMDKPDKPTYESKNVIGKLFREVKERA 935


>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
            gi|548853371|gb|ERN11375.1| hypothetical protein
            AMTR_s00176p00039530 [Amborella trichopoda]
          Length = 1210

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 515/758 (67%), Positives = 594/758 (78%)
 Frame = -1

Query: 2279 DYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYME 2100
            +Y+KD  ++QWVR+IDFT S SIGQSS++CL LP     P  IR+NF YYKE  G F ++
Sbjct: 273  NYYKDFPDEQWVRSIDFTPSCSIGQSSSLCLALPNGTRIP-NIRENFAYYKEIGGAFNLK 331

Query: 2099 SGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPS 1920
            +GSSFSHSL LVPI+ PP  I+LPY IL  VNSLVQ+G L G TLD  F+  +N   +PS
Sbjct: 332  TGSSFSHSLHLVPIVHPPDQIKLPYKILFRVNSLVQNGFLVGPTLDTEFYNLLNG--LPS 389

Query: 1919 AYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPS 1740
             ++E +LE +  L  CC EP KWL EQY KYR         +ISL+ GLVY+ RV +TPS
Sbjct: 390  PFVERSLEDISRLTNCCLEPAKWLQEQYKKYRNLPRRPSPAAISLEPGLVYVHRVQVTPS 449

Query: 1739 KVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIY 1560
            KVYFYGPE+NVSNRVLR F   IDNF+RISF+DEDF  + STDLS R    +E++ T +Y
Sbjct: 450  KVYFYGPEVNVSNRVLRQFSNYIDNFLRISFIDEDFGSIRSTDLSKRMASGAEEKHTTVY 509

Query: 1559 RRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNV 1380
             R+LS L NGIVIGDKKF+FLAFSSSQLRDNSAWMF+  DG+TAA IR+WMGDF  IRNV
Sbjct: 510  GRVLSTLKNGIVIGDKKFEFLAFSSSQLRDNSAWMFSPIDGITAANIRQWMGDFSGIRNV 569

Query: 1379 AKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAKK 1200
            AK AAR+GQSF SS ETL V+  E+  I DI+   NGK YVFSDGIGKIS +FA+KVA K
Sbjct: 570  AKCAARMGQSFGSSTETLNVKPEEVERISDIK---NGK-YVFSDGIGKISLEFAKKVALK 625

Query: 1199 CAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPCF 1020
            C      PSAFQIRYGGYKGVVAVDPTS  KLSLR SM KY S N KLDVL++SKFQPCF
Sbjct: 626  CGCSEKTPSAFQIRYGGYKGVVAVDPTSRYKLSLRGSMRKYSSNNTKLDVLAYSKFQPCF 685

Query: 1019 LNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEML 840
            LNRQ+ITLLSTLGV+DN+FE KQK+ V QL+  L DP SA EALE+MSPGENVNVLKEML
Sbjct: 686  LNRQVITLLSTLGVQDNVFETKQKDAVSQLDKILVDPESAFEALELMSPGENVNVLKEML 745

Query: 839  MCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQV 660
             CGY PD+EPFLSMMLQ FR  KL EL+ KTRIF+PNGRSMMGCLDET  LEY QVF+Q 
Sbjct: 746  FCGYLPDSEPFLSMMLQTFRGLKLSELKTKTRIFIPNGRSMMGCLDETGILEYGQVFVQF 805

Query: 659  SCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHMV 480
            S IGN++        I  + S+QR  ++ GKV+VAKNPCLHPGDVR+L A+DV  LHHMV
Sbjct: 806  SAIGNRRLHEFGLSKINESGSDQRVRVVVGKVIVAKNPCLHPGDVRILTAIDVPALHHMV 865

Query: 479  DCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQI 300
            +CVVFPQKGKRPHPNECSGSDLDGDIYFVSWDP LIP  Q  PM+Y PAP   +DH+V I
Sbjct: 866  NCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPMLIPCHQGTPMEYEPAPNNDLDHEVTI 925

Query: 299  EEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPAQ 120
            EE++EYF NYM+NDSLGIIANAHTVFAD+E  KA+S  CV+LA LFS+AVDFPKTGVPA 
Sbjct: 926  EEIEEYFTNYMINDSLGIIANAHTVFADKEPMKADSTPCVDLANLFSVAVDFPKTGVPAD 985

Query: 119  IPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDI 6
            IP HLYVKEYPDFMDK DKPTY+S+ VIGKLFREVKD+
Sbjct: 986  IPQHLYVKEYPDFMDKTDKPTYQSRRVIGKLFREVKDL 1023


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score = 1016 bits (2627), Expect = 0.0
 Identities = 514/760 (67%), Positives = 603/760 (79%), Gaps = 1/760 (0%)
 Frame = -1

Query: 2279 DYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYME 2100
            +YFKD  +DQWVRA DFT S  IG SSA+ LELP   + P  +R+NF YYKE E  F +E
Sbjct: 197  NYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLP-DLRENFVYYKESEERFILE 255

Query: 2099 SGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPS 1920
            SGSSFS +LDLVPI+ PP GI LP++ +  +N L+Q+GCL+G TLD  F+  V+PQ I +
Sbjct: 256  SGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPTLDVDFYRLVDPQRIRN 315

Query: 1919 A-YIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
               I +ALEKL++L EC YEP  WL+EQY KY T+      P+I+LD GLVY+RRV +TP
Sbjct: 316  VDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAIALDSGLVYVRRVQVTP 375

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
            SKVYF GPEINVSNRVLR + + ID F+R+SFVDE+ E++ STDLSPR    +EDR T I
Sbjct: 376  SKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTDLSPRTSNANEDRRTGI 435

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            YRRILSVL NGI IGD+KF+FLAFSSSQLRDNS WMFA+ DG +A  IR+W+GDF  IRN
Sbjct: 436  YRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHSADTIRQWIGDFRSIRN 495

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSF SS ETLTV   E  VI DIEI+    KYVFSDGIGKIS+ FA++VAK
Sbjct: 496  VAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVFSDGIGKISSTFAKRVAK 555

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC ++  +PSAFQIRY GYKGVVAVDPTS  KLSLR+SM KY S+  KLDVL++SK Q C
Sbjct: 556  KCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKYESELHKLDVLAYSKLQHC 615

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            +LNRQLITLLSTLGV D +FEKKQ+E V QLN  L DP+ A+EAL++MS GE  N+LKE+
Sbjct: 616  YLNRQLITLLSTLGVGDRVFEKKQREAVQQLNAILNDPLRAREALDLMSAGETTNILKEL 675

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L CGY+P+AEPFLSMMLQAFRA KL ELR KTRI +P+GR+MMGCLDE RTLEY +VF+Q
Sbjct: 676  LSCGYQPNAEPFLSMMLQAFRASKLQELRTKTRISIPDGRAMMGCLDEMRTLEYGEVFVQ 735

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S I ++ F       +   T   + +I+ G+VVVAKNPCLHPGDVRVL+AV+V  LHHM
Sbjct: 736  FSGITHRPF--FEDSFMLGGTGSGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHM 793

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP  Q EPMDY+PAP   +DHDV+
Sbjct: 794  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVR 853

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEVQEYF NY+VNDSLGIIANAHT FAD+E  KA S +C+ELARLFSIAVDFPKTGVPA
Sbjct: 854  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPA 913

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             IP  LYVKEYPDFM+K +KPTYES++VIGKLFREVKDIA
Sbjct: 914  VIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIA 953


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 506/758 (66%), Positives = 593/758 (78%)
 Frame = -1

Query: 2276 YFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYMES 2097
            YF    +DQWVR  DFT S  IGQSS++CL+LP     P   RDNF YYKE E PF +E+
Sbjct: 189  YFMVTQDDQWVRTTDFTQSL-IGQSSSLCLQLPYGMRLP-NFRDNFLYYKESETPFRLET 246

Query: 2096 GSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPSA 1917
            G  FSH+ DLVPI+ PP  I+LPY +L  V SLVQ+GCL G  LD +FF  VNP      
Sbjct: 247  GVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSFFDLVNPAKHDIR 306

Query: 1916 YIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPSK 1737
            YIEHALEKLY+L ECCY P  WL EQY +YRTS  H  +P+I LDDGLVY+ RV +TP++
Sbjct: 307  YIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDDGLVYVHRVQVTPTR 366

Query: 1736 VYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIYR 1557
            VYF GPE+NVSNRVLRH+ + IDNF+R+SFVDE++++M+STDLSPR     E++ T++Y 
Sbjct: 367  VYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSPRVAAGDENKRTKLYE 426

Query: 1556 RILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVA 1377
            R++S+L +G+ IGD+KFDFLAFSSSQLRDNS WMFA  DGL A  IREWMGDF  IRNVA
Sbjct: 427  RVISILRDGVRIGDRKFDFLAFSSSQLRDNSLWMFAPTDGLNADGIREWMGDFSSIRNVA 486

Query: 1376 KYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAKKC 1197
            KYAARLGQSF SS ETL+V + EI  I D++   NG +Y FSDGIGKIS DFAR+VA KC
Sbjct: 487  KYAARLGQSFGSSTETLSVSKREIEEIQDVK---NGTEYTFSDGIGKISEDFARQVAAKC 543

Query: 1196 AIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPCFL 1017
             ++SS PSAFQIRYGGYKGVVAVDP+S KKLSLR SM KY S N KLDVL+WSK+QPCFL
Sbjct: 544  GVRSSTPSAFQIRYGGYKGVVAVDPSSKKKLSLRPSMLKYQSDNTKLDVLAWSKYQPCFL 603

Query: 1016 NRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEMLM 837
            NRQ+ITLLSTLGVKD++FEK+Q+E V QL+  L DP+ AQEAL++MSPGEN ++LKEML 
Sbjct: 604  NRQIITLLSTLGVKDHVFEKRQREAVAQLDDVLIDPMRAQEALDLMSPGENTHILKEMLK 663

Query: 836  CGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQVS 657
            CGY+PD EPFLSMMLQ FRA KLL+LR K R+F+P  R MMGCLDET  L+Y QVF++ S
Sbjct: 664  CGYEPDGEPFLSMMLQTFRASKLLDLRVKARVFIPKARQMMGCLDETGILKYGQVFVRYS 723

Query: 656  CIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHMVD 477
                   +G       N+T+ +R   + GKVVVAKNPCLHPGDVRVL AVDV  L HMVD
Sbjct: 724  ---GAVKRGLFDDSYDNSTANERFDPVRGKVVVAKNPCLHPGDVRVLTAVDVPELRHMVD 780

Query: 476  CVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQIE 297
            CVVFP+ GKRPHPNECSGSDLDGDIYFV WD +LIP  Q+EPMDY PAP   +DHDV IE
Sbjct: 781  CVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIE 840

Query: 296  EVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPAQI 117
            EV++YF NY+VNDSLGIIANAHTVFAD+E   A S+ C+ELARLFSIAVDF KTG+PA+I
Sbjct: 841  EVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPAEI 900

Query: 116  PPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            PPHL VKEYPDFM+K DK  Y S  VIGKLFREVKDIA
Sbjct: 901  PPHLRVKEYPDFMEKPDKINYASSRVIGKLFREVKDIA 938


>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score = 1015 bits (2624), Expect = 0.0
 Identities = 508/759 (66%), Positives = 610/759 (80%), Gaps = 1/759 (0%)
 Frame = -1

Query: 2279 DYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYME 2100
            +YFK++ +DQW+RA+DFT    IGQSSAICLELP + +FP  IR+ F +Y+E+EG + +E
Sbjct: 204  NYFKESPDDQWIRAVDFTPFNCIGQSSAICLELPCDRDFP-NIREYFVHYQENEGQYTLE 262

Query: 2099 SGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPS 1920
            SGS FSH+LD+VPI+APP GI +P+DIL  VNSLVQ GCL+G+ LD AF+  V+P  I  
Sbjct: 263  SGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHGCLSGSELDNAFYCLVDPLRINV 322

Query: 1919 AYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPS 1740
             +IEHALEK+Y+  + CYEP +WL +QY  Y  SN+   +PSISLD+GLVY+RRV ITP 
Sbjct: 323  DFIEHALEKMYYSKDFCYEPARWLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRVQITPC 382

Query: 1739 KVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIY 1560
            KVYF GPEINVSNRV+RHFHE IDNF+R+SFVDE+ ++++STDLS R    S    T +Y
Sbjct: 383  KVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDEELDKLYSTDLSSRI---SVGVRTEVY 439

Query: 1559 RRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFA-SKDGLTAACIREWMGDFHEIRN 1383
             RILS+L NGIVIGDKKF+FLAFSSSQLR+NS WMFA +  GLTA  IR WMGDF +IRN
Sbjct: 440  NRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRN 499

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSF SS ETL+V R+EI +IPD +++ +  +YVFSDGIGKIS +FAR+VAK
Sbjct: 500  VAKYAARLGQSFGSSTETLSVNRNEIEIIPDAQVKHDTIEYVFSDGIGKISLEFARRVAK 559

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC   S+ PSAFQIRYGGYKGVVAVDPTS  KLSLR+SM KY S N KLDVL+ SK+QPC
Sbjct: 560  KCGYDST-PSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMYKYDSDNTKLDVLACSKYQPC 618

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            +LNRQLITLLSTL V+D++FEKKQKE V+QLN  LT+ + AQE L++MS GE  N+LKEM
Sbjct: 619  YLNRQLITLLSTLKVEDSVFEKKQKEAVNQLNTILTNSLKAQEVLDLMSTGEITNILKEM 678

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            L CGYKP+ EPFLSMMLQ FRA KLLELR KTRIF+P GR+MMG LDETRTLEY +VF+Q
Sbjct: 679  LFCGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQ 738

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S   N +           +     + ++ GKVVVAKNPCLHPGDVRVL+AVDV  LHHM
Sbjct: 739  YS---NNRISSL-------SYGSANSLVVTGKVVVAKNPCLHPGDVRVLKAVDVPALHHM 788

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIPP   EPM+Y    P+V+ HDV+
Sbjct: 789  VDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPETTEPMEYASVQPIVLYHDVE 848

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEV+EYF NY++NDSLGIIANAH VFAD+E  KA+++ C+ELA+LFSIAVDFPKTG+PA
Sbjct: 849  IEEVEEYFTNYILNDSLGIIANAHIVFADKEPAKAKAEPCIELAKLFSIAVDFPKTGIPA 908

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDI 6
             IPPHL+ KEYPDFM+K DK TY+S +VIGKLFRE++ I
Sbjct: 909  VIPPHLFAKEYPDFMEKPDKTTYKSNNVIGKLFREIQGI 947


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 513/760 (67%), Positives = 603/760 (79%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            ++YF+D   D WVR  DFT    IGQSS++CL L  + E P    +NF YYK+ +G F +
Sbjct: 193  MNYFRDP--DDWVRTTDFTPGSCIGQSSSLCLVLTSDGELP-DFEENFAYYKKTDGQFIL 249

Query: 2102 ESGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIP 1923
            E+GS+FS + DLVPI+  P GI+LPYDIL  +N LVQ GCL+G TLD  F+  V+P+ I 
Sbjct: 250  ENGSTFSRNRDLVPIVGSPAGIDLPYDILFKINLLVQQGCLSGPTLDNNFYRLVDPRRIS 309

Query: 1922 SAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITP 1743
               IE AL+KL +L E CYEP  WL+E+Y KY  S        ISLD GLVY+RRV ITP
Sbjct: 310  RPCIEFALDKLSNLKESCYEPAVWLNEEYRKYMMSKKPPKPALISLDSGLVYVRRVQITP 369

Query: 1742 SKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRI 1563
            SKVYF GPE+NVSNR+LR +  DIDNF+R+SFVDE+ E+++STDLSPR    +  R TRI
Sbjct: 370  SKVYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYSTDLSPR----TSTRKTRI 425

Query: 1562 YRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRN 1383
            Y R+LSVL +GIV+G KKF+FLAFSSSQLR+NS WMFA  D  +A  IR  MGDF +IRN
Sbjct: 426  YNRVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLWMFAPTDEDSADTIRAGMGDFRQIRN 485

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVAK 1203
            VAKYAARLGQSF SS ETL+V R+E+ VIPD+ + + G KYVFSDGIGKISADFA +VAK
Sbjct: 486  VAKYAARLGQSFGSSTETLSVGRNEMEVIPDVTVNSCGIKYVFSDGIGKISADFAERVAK 545

Query: 1202 KCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPC 1023
            KC  ++  PSAFQIRYGGYKGVVAVDPTS  KLSLR+SM KY S+N KLDVL+ SK+QPC
Sbjct: 546  KCGYKAFTPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMSKYESENTKLDVLACSKYQPC 605

Query: 1022 FLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEM 843
            FLNRQLITLLSTL V+D++F KKQ+  V QLN  LTDP+ A+EAL++MS GE+ NVLKE+
Sbjct: 606  FLNRQLITLLSTLEVQDHVFLKKQRAAVQQLNAILTDPLKAEEALDLMSAGESTNVLKEL 665

Query: 842  LMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQ 663
            LMCGYKP+ EPFLSMMLQ FRA KLLELR KTRIF+P+GR+MMGCLDETRTLEY QVF+Q
Sbjct: 666  LMCGYKPNVEPFLSMMLQTFRASKLLELRTKTRIFIPDGRAMMGCLDETRTLEYGQVFVQ 725

Query: 662  VSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHM 483
             S    +Q    +      ++S    FI+EGKVVVAKNPCLHPGDVRVL+AV+V +LHHM
Sbjct: 726  FSGKRRRQLFDDICI----HSSLDSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHHM 781

Query: 482  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQ 303
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIPP QI+PMDYTPAPP+ MD DV 
Sbjct: 782  VDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVT 841

Query: 302  IEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPA 123
            IEEV+EYFVNY+VNDSLGIIANAHTVFAD +L KA S  C++LA+LFSIAVDFPKTGVPA
Sbjct: 842  IEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPA 901

Query: 122  QIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            +IPP LY KEYPDFM+K DK TY S +VIG+LFREVKDIA
Sbjct: 902  EIPPELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKDIA 941


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
            gi|557094740|gb|ESQ35322.1| hypothetical protein
            EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 506/762 (66%), Positives = 596/762 (78%), Gaps = 2/762 (0%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDE-GPFY 2106
            LD+F D  ++QW+R  DFT+S  IGQSS+ CLELP+    P   R+NF  Y E E G F 
Sbjct: 194  LDFFSDGSDEQWIRTTDFTSSSCIGQSSSFCLELPRQLNVP-DFRENFANYAEHEAGTFL 252

Query: 2105 MESGSSFSH-SLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQL 1929
            +ESGSS+S  + +LVP++ PPPG +LP++IL  VN+LVQS C+ G  LD  F+  ++PQ 
Sbjct: 253  IESGSSYSSDATNLVPVVDPPPGFDLPFEILFKVNALVQSACIPGPVLDLDFYQLLDPQK 312

Query: 1928 IPSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAI 1749
               A I+H+LEKL++L ECCYEP +WL E Y ++ T      +P ISLDDGLVY+ RV +
Sbjct: 313  HERALIDHSLEKLFYLKECCYEPARWLREGYKEWTTKEKLPESPMISLDDGLVYMHRVQV 372

Query: 1748 TPSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCT 1569
            TP+++YF GPE+NVSNRVLRH+   I+NF+RISFVDED E++ S DLSPR    +  R T
Sbjct: 373  TPTRIYFQGPEVNVSNRVLRHYSNYINNFLRISFVDEDLEKIRSMDLSPRS---TTQRRT 429

Query: 1568 RIYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 1389
            ++Y RI SVL +GIVIGDKKF+FLAFSSSQLR+NSAWMFA  DGL+A  IR WMGDF  I
Sbjct: 430  KLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLSAEIIRAWMGDFEHI 489

Query: 1388 RNVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKV 1209
            RNVAKYAARLGQSFSSS+ETL VR  EI VIPD+EI   G +YVFSDGIGKIS++FAR+V
Sbjct: 490  RNVAKYAARLGQSFSSSRETLNVRTDEIEVIPDVEITYLGTRYVFSDGIGKISSEFARRV 549

Query: 1208 AKKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQ 1029
            AKKC +    PSAFQIRYGGYKGVVAVD  S KKLSLR+SM K+ S+N KLDVL+WSK+Q
Sbjct: 550  AKKCGLTEFTPSAFQIRYGGYKGVVAVDRNSYKKLSLRKSMSKFESKNTKLDVLAWSKYQ 609

Query: 1028 PCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLK 849
            PC+LNRQLITLLSTLGVKD +FEKKQ+EVVD+L+  LTDP+ A EAL +M+PGEN  +LK
Sbjct: 610  PCYLNRQLITLLSTLGVKDYVFEKKQREVVDKLDAILTDPLEAHEALGLMAPGENTKILK 669

Query: 848  EMLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVF 669
            E+++CGYKPDAEPFLSMMLQ FRA KLLELR K+RIF+  GRSMMGCLDETRTLEY QV 
Sbjct: 670  ELILCGYKPDAEPFLSMMLQNFRASKLLELRTKSRIFIHGGRSMMGCLDETRTLEYGQVV 729

Query: 668  IQVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLH 489
            +Q S                 + +      + G VVVAKNPCLHPGDVRVLQAV V  L 
Sbjct: 730  VQFS-----------------HPTRPGCQYITGPVVVAKNPCLHPGDVRVLQAVYVSALS 772

Query: 488  HMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHD 309
            HMVDCV+FPQKG RPHPNECSGSDLDGDIYFV WDPELIPP   EPMDYTP P  ++DHD
Sbjct: 773  HMVDCVIFPQKGLRPHPNECSGSDLDGDIYFVCWDPELIPPETSEPMDYTPEPAQILDHD 832

Query: 308  VQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGV 129
            V IEE++EYF NY+VNDSLGIIANAHT FAD+E  KA SD C+ELAR FSIAVDFPKTGV
Sbjct: 833  VTIEEIEEYFTNYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGV 892

Query: 128  PAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             A+IP HLYVKEYPDFM+K DKPTYESK+VIGKLFREVK+ A
Sbjct: 893  AAEIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 934


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 504/762 (66%), Positives = 602/762 (79%), Gaps = 2/762 (0%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEG-PFY 2106
            +D++ D  ++QW+R  DFT+S  IGQS+A CLELP +   P   R+NF  Y E    PF 
Sbjct: 185  MDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVP-DFRENFANYAEHRASPFL 243

Query: 2105 MESGSSFSHSLD-LVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQL 1929
            +ESGSS+S + + LVP++ PPPG +LP++IL  +N+LVQ+ CL G  LD   +  +NP+ 
Sbjct: 244  IESGSSYSSNANKLVPVVDPPPGFDLPFEILFKLNTLVQNACLPGPALDLDVYQLLNPKK 303

Query: 1928 IPSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAI 1749
            I  A I+H LEKL++L E CYEP +WL +QY +  +      +P+ISLDDGLVY+ RV +
Sbjct: 304  IDRALIDHCLEKLFYLGESCYEPARWLRKQYKELSSKGKLPLSPTISLDDGLVYMYRVQV 363

Query: 1748 TPSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCT 1569
            TP++VYF GPE+NVSNRVLRH+ + I+NF+R+SFVDED E++ S DLSPR    S  R T
Sbjct: 364  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLSPRS---STQRRT 420

Query: 1568 RIYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 1389
            ++Y RI SVL +GIVIGDKKF+FLAFSSSQLR+NSAWMFA  DGLT+A IR WMGDF  I
Sbjct: 421  KLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLTSAHIRAWMGDFDHI 480

Query: 1388 RNVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKV 1209
            RNVAKYAARLGQSFSSS+ETL VR  EI VIPD+EI + G +YVFSDGIGKISA+FAR+V
Sbjct: 481  RNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRV 540

Query: 1208 AKKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQ 1029
            AKKC +    PSAFQIRYGGYKGVVAVDP S KKLSLR+SM K+ S+N KLDVL+WSK+Q
Sbjct: 541  AKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQ 600

Query: 1028 PCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLK 849
            PC++NRQLITLLSTLG+KD++FEKKQ+EVVD+L+  LTDP+ A EAL +M+PGEN N+LK
Sbjct: 601  PCYMNRQLITLLSTLGIKDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILK 660

Query: 848  EMLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVF 669
             +++CGYKPDAEPFLSMMLQ FRA KLLELR KTRIF+  GRSMMGCLDETRTLEY QV 
Sbjct: 661  ALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVV 720

Query: 668  IQVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLH 489
            +Q S                +     R FI+ G VVVAKNPCLHPGDVRVL+AV+V  L+
Sbjct: 721  VQYS----------------DPMRPGRRFIITGPVVVAKNPCLHPGDVRVLEAVNVPALN 764

Query: 488  HMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHD 309
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIPP   EPMDYTP P  ++DHD
Sbjct: 765  HMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHD 824

Query: 308  VQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGV 129
            V IEEV+EYF NY+VNDSLGIIANAHT FAD+E  KA SD C+ELAR FS+AVDFPKTGV
Sbjct: 825  VTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGV 884

Query: 128  PAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             A+IP HL+VKEYPDFM+K DKPTYESK+VIGKLFREVK+ A
Sbjct: 885  AAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 926


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 504/762 (66%), Positives = 601/762 (78%), Gaps = 2/762 (0%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEG-PFY 2106
            +D++ D  ++QW+R  DFT+S  IGQS+A CLELP +   P   R+NF  Y E    PF 
Sbjct: 195  MDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVP-DFRENFANYAEHRASPFL 253

Query: 2105 MESGSSFSHSLD-LVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQL 1929
            +ESGSS+S + + LVP++ PPPG +LP++IL  +N+LVQ+ CL G  LD   +  +NP+ 
Sbjct: 254  IESGSSYSSNANKLVPVVDPPPGFDLPFEILFKLNTLVQNACLPGPALDLDVYQLLNPKK 313

Query: 1928 IPSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAI 1749
               A I+H LEKL+HL E CYEP +WL +QY +  +      +P+ISLDDGLVY+ RV +
Sbjct: 314  YNRALIDHCLEKLFHLGESCYEPARWLRKQYKELSSKGKLPLSPTISLDDGLVYMYRVQV 373

Query: 1748 TPSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCT 1569
            TP++VYF GPE+NVSNRVLRH+ + I+NF+R+SFVDED E++ S DLSPR    S  R T
Sbjct: 374  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLSPRS---STQRRT 430

Query: 1568 RIYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 1389
            ++Y RI SVL +GIVIGDKKF+FLAFSSSQLR+NSAWMFA  DGLT+A IR WMGDF  I
Sbjct: 431  KLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLTSAHIRAWMGDFDHI 490

Query: 1388 RNVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKV 1209
            RNVAKYAARLGQSFSSS+ETL VR  EI VIPD+EI + G +YVFSDGIGKISA+FAR+V
Sbjct: 491  RNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRV 550

Query: 1208 AKKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQ 1029
            AKKC +    PSAFQIRYGGYKGVVAVDP S KKLSLR+SM K+ S+N KLDVL+WSK+Q
Sbjct: 551  AKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQ 610

Query: 1028 PCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLK 849
            PC++NRQLITLLSTLGVKD++F+KKQ+EVVD+L+  LTDP+ A EAL +M+PGEN N+LK
Sbjct: 611  PCYMNRQLITLLSTLGVKDSVFKKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILK 670

Query: 848  EMLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVF 669
             +++CGYKPDAEPFLSMMLQ FRA KLLELR KTRIF+  GRSMMGCLDETRTLEY QV 
Sbjct: 671  ALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVV 730

Query: 668  IQVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLH 489
            +Q S                +     R FI+ G VVVAKNPCLHPGDVRVL+AV+V  L+
Sbjct: 731  VQYS----------------DPMRPGRRFIITGPVVVAKNPCLHPGDVRVLEAVNVPALN 774

Query: 488  HMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHD 309
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIPP   EPMDYTP P  ++DHD
Sbjct: 775  HMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHD 834

Query: 308  VQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGV 129
            V IEEV+EYF NY+VNDSLGIIANAHT FAD+E  KA SD C+ELAR FS+AVDFPKTGV
Sbjct: 835  VTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGV 894

Query: 128  PAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             A+IP HL+VKEYPDFM+K DKPTYESK+VIGKLFREVK+ A
Sbjct: 895  AAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 936


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 511/766 (66%), Positives = 609/766 (79%), Gaps = 7/766 (0%)
 Frame = -1

Query: 2279 DYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYME 2100
            ++FKDA ++QW+RAIDFT    IGQSSAICLELP   + P   R+NF YY+E E  + ++
Sbjct: 200  NFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLP-NFRENFAYYEESERQYTLQ 258

Query: 2099 SGSSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPS 1920
            +G  FS +  LVPI+APP G+++ YDIL  VNSLVQ  CLAG  LD  F+  V+P+ +P 
Sbjct: 259  TGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLAGPALDGDFYRLVDPRRMPR 318

Query: 1919 AYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPS 1740
             +IE+ALEK+Y+  E CYEP KWL +QY  Y  S +H  +P+ISLD GLVY+RRV ITP 
Sbjct: 319  EFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRSPAISLDTGLVYVRRVQITPC 378

Query: 1739 KVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIY 1560
            KVYF GPE+NVSNRVLRHF E IDNF+R+SFVDE+ +++ STDLS R    S+++ T IY
Sbjct: 379  KVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFSTDLSSR----SQNKKTEIY 434

Query: 1559 RRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFA-SKDGLTAACIREWMGDFHEIRN 1383
             RILS+L NGIV+GDKKF+FLAFSSSQLR+NS WMFA ++ G TAA IR+WMG+F +IRN
Sbjct: 435  TRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRN 494

Query: 1382 VAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQT-NGKKYVFSDGIGKISADFARKVA 1206
            VAKYAARLGQSF SS ETL+V R E+ +IPD++  T +G +YVFSDGIGKIS +FA+KVA
Sbjct: 495  VAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDGNEYVFSDGIGKISLEFAQKVA 554

Query: 1205 KKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQP 1026
            KKC    + PSAFQIRYGGYKGVVAVDP S  KLSLR+SM KY S N KLDVL+ SKFQP
Sbjct: 555  KKCGYDCT-PSAFQIRYGGYKGVVAVDPKSCYKLSLRKSMRKYDSDNTKLDVLARSKFQP 613

Query: 1025 CFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKE 846
            C+LNRQLI+LLSTLG+KD++FEKKQ+E V+QLN  LTD + AQE L++MS GE  NVLKE
Sbjct: 614  CYLNRQLISLLSTLGIKDDVFEKKQRETVNQLNTILTDSLKAQEVLDLMSAGEITNVLKE 673

Query: 845  MLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFI 666
            ML+CGYKP+ EPFLSMMLQ FRA KLLELR K+RIF+P GR+MMGCLDETRTLEY QVF+
Sbjct: 674  MLICGYKPNEEPFLSMMLQTFRASKLLELRLKSRIFIPKGRAMMGCLDETRTLEYGQVFV 733

Query: 665  QVSC-----IGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDV 501
            Q S      + +  F   LP          + ++++GKVVVAKNPCLHPGDVRVLQAVDV
Sbjct: 734  QFSNNRLQNLSDDFFSYDLP----------KNYMVKGKVVVAKNPCLHPGDVRVLQAVDV 783

Query: 500  RNLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVV 321
             +L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP   I+PMDYT    V 
Sbjct: 784  PDLYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVE 843

Query: 320  MDHDVQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFP 141
            +DHDV IEEV+EYF NY+VNDSLGIIANAHTVFAD+E  KA SD CV+LARLFS AVDFP
Sbjct: 844  LDHDVMIEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFP 903

Query: 140  KTGVPAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
            KTGVPA IPP L+VKEYPDFM+K DKPTY+S +VIGKLFREVK+I+
Sbjct: 904  KTGVPAVIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVKEIS 949


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 510/761 (67%), Positives = 597/761 (78%), Gaps = 5/761 (0%)
 Frame = -1

Query: 2276 YFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYMES 2097
            +FK+  +DQWVR  DFT S+ IG SS++CLE       P    ++F YYKE      +++
Sbjct: 187  FFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFHNGVRLP-NFSESFFYYKESANQVILQT 244

Query: 2096 GSSFSHS---LDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLI 1926
            G +FS S   L LVPI+  P GIELPY IL  ++SL+Q GC  G  L+  FF  V+P+  
Sbjct: 245  GFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRR 304

Query: 1925 PSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAIT 1746
              A IEHALEKLY+L ECCY+PV+WL EQY +Y        +PSI+LDDGLVY+RRV +T
Sbjct: 305  NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLVYVRRVLVT 364

Query: 1745 PSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTR 1566
            P KVYF GPE+NVSNRVLR++ EDIDNF+R+SFVDE++E++HSTDL PR    +  R T 
Sbjct: 365  PCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRASTGNGVR-TD 423

Query: 1565 IYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIR 1386
            IY RILS L NG VIGDKKF+FLAFSSSQLRDNS WMFAS+ GLTA  IR WMG F +IR
Sbjct: 424  IYLRILSTLRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGGFQQIR 483

Query: 1385 NVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKVA 1206
            NVAKYAARLGQSF SS+ETL+V RHE+ VIPD+    +G  Y+FSDGIGKISADFAR+VA
Sbjct: 484  NVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISADFARRVA 543

Query: 1205 KKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQP 1026
             KC +Q + PS FQIRYGGYKGVVAVDP S  KLSLR SM KY S N KLDVL WSK+QP
Sbjct: 544  VKCGLQYT-PSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDVLGWSKYQP 602

Query: 1025 CFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKE 846
            C+LNRQL+TLLSTLGVKD++FE+KQ E VDQL+  L D + AQEALE+MSPGEN N+LKE
Sbjct: 603  CYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMSPGENTNILKE 662

Query: 845  MLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFI 666
            ML CGY PDAEPFLSMMLQ FRA KLL+LR ++RIF+PNGR+MMGCLDE+RTLEY QVF+
Sbjct: 663  MLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFV 722

Query: 665  QVSCIGNKQF--QGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNL 492
            Q +  G +QF  + H PF   ++ S    FILEG VVVAKNPCLHPGD+RVL+AVDV  L
Sbjct: 723  QFTGTGRRQFYEESH-PF--NDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPAL 779

Query: 491  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDH 312
            HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFV WDP+L+PP Q +PMDYTPAP   +DH
Sbjct: 780  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDH 839

Query: 311  DVQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTG 132
            DV IEEV+EYF NY+VNDSLGIIANAH VFAD+E   A SD C +LA+LFSIAVDFPKTG
Sbjct: 840  DVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTG 899

Query: 131  VPAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKD 9
            VPA+IP  L  KEYPDFM+K DKPTY S+ VIGKLF++VKD
Sbjct: 900  VPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKD 940


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 503/762 (66%), Positives = 601/762 (78%), Gaps = 2/762 (0%)
 Frame = -1

Query: 2282 LDYFKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYM 2103
            +D++ D  ++QW+R  DFT+S  IGQS+A CLELP +   P   R+NF  Y E     Y+
Sbjct: 195  MDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVP-DFRENFANYAEHRASTYL 253

Query: 2102 -ESGSSFSHSLD-LVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQL 1929
             ESGSS+S + + LVP++ PPPG +LP++IL  +N+LVQ+ CL G  LD   +  +NP+ 
Sbjct: 254  IESGSSYSSNANKLVPVVDPPPGFDLPFEILFKLNTLVQNACLPGPALDLDVYQLLNPKK 313

Query: 1928 IPSAYIEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAI 1749
            I  A I+H LEKL++L E CYEP +WL +QY +  +      +P+ISLDDGLVY+ RV +
Sbjct: 314  IDRALIDHCLEKLFYLGESCYEPARWLRKQYKELSSKGKLPLSPTISLDDGLVYMYRVQV 373

Query: 1748 TPSKVYFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCT 1569
            TP++VYF GPE+NVSNRVLRH+ + I+NF+R+SFVDED E++ S DLSPR    S  R T
Sbjct: 374  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLSPRS---STQRRT 430

Query: 1568 RIYRRILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEI 1389
            ++Y RI SVL +GIVIGDKKF+FLAFSSSQLR+NSAWMFA  +GLT+A IR WMGDF  I
Sbjct: 431  KLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIEGLTSAHIRAWMGDFDHI 490

Query: 1388 RNVAKYAARLGQSFSSSKETLTVRRHEIAVIPDIEIQTNGKKYVFSDGIGKISADFARKV 1209
            RNVAKYAARLGQSFSSS+ETL VR  EI VIPD+EI + G +YVFSDGIGKISA+FAR+V
Sbjct: 491  RNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRV 550

Query: 1208 AKKCAIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQ 1029
            AKKC +    PSAFQIRYGGYKGVVAVDP S KKLSLR+SM K+ S+N KLDVL+WSK+Q
Sbjct: 551  AKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQ 610

Query: 1028 PCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLK 849
            PC++NRQLITLLSTLGV+D++FEKKQ+EVVD+L+  LTDP+ A EAL +M+PGEN N+LK
Sbjct: 611  PCYMNRQLITLLSTLGVEDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILK 670

Query: 848  EMLMCGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVF 669
             +++CGYKPDAEPFLSMMLQ FRA KLLELR KTRIF+  GRSMMGCLDETRTLEY QV 
Sbjct: 671  ALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVV 730

Query: 668  IQVSCIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLH 489
            +Q S                +     R FI+ G VVVAKNPCLHPGDVRVL+AV+V  L+
Sbjct: 731  VQYS----------------DPMRPGRRFIITGPVVVAKNPCLHPGDVRVLEAVNVPALN 774

Query: 488  HMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHD 309
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIPP   EPMDYTP P  ++DHD
Sbjct: 775  HMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHD 834

Query: 308  VQIEEVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGV 129
            V IEEV+EYF NY+VNDSLGIIANAHT FAD+E  KA SD C+ELAR FS+AVDFPKTGV
Sbjct: 835  VTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGV 894

Query: 128  PAQIPPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDIA 3
             A+IP HLYVKEYPDFM+K DKPTYESK+VIGKLFREVK+ A
Sbjct: 895  AAEIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 936


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 492/757 (64%), Positives = 601/757 (79%), Gaps = 1/757 (0%)
 Frame = -1

Query: 2273 FKDAMNDQWVRAIDFTTSYSIGQSSAICLELPQNCEFPPQIRDNFPYYKEDEGPFYMESG 2094
            F   ++ QW RA DFT S SIGQS+A+CLE+P   + P    D F Y+KE +G F + SG
Sbjct: 198  FSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLP-NFHDKFAYFKEIKGKFTLVSG 256

Query: 2093 SSFSHSLDLVPIIAPPPGIELPYDILCSVNSLVQSGCLAGATLDAAFFASVNPQLIPSAY 1914
            S++S +++LVP++ PP  I LPY IL  +N LVQ GCL G  LD +F+  V+ Q+  +A 
Sbjct: 257  STYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPALDISFYQMVDSQIYNTAV 316

Query: 1913 IEHALEKLYHLNECCYEPVKWLDEQYTKYRTSNHHFGTPSISLDDGLVYIRRVAITPSKV 1734
            I+HAL+KL HL ECCY P KWLDE+Y KY    +    P ++L++GLVY+ RV +TP KV
Sbjct: 317  IDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILTLNEGLVYVHRVQVTPCKV 376

Query: 1733 YFYGPEINVSNRVLRHFHEDIDNFIRISFVDEDFERMHSTDLSPRKPFKSEDRCTRIYRR 1554
            YF GPE+N+SNRVLR + + IDNF+R+SFVDE+  +M+ST+LSPR     ED  T+I++R
Sbjct: 377  YFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTELSPRASSSLEDGKTKIFKR 436

Query: 1553 ILSVLSNGIVIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAACIREWMGDFHEIRNVAK 1374
            ILSVL +GI IGDKKF+FLA+SSSQLR+N+AWMFA K+ LTAA IR+WMGDFH IRNVAK
Sbjct: 437  ILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTAAKIRQWMGDFHNIRNVAK 496

Query: 1373 YAARLGQSFSSSKETLTVRRHEIAVIPDIEIQT-NGKKYVFSDGIGKISADFARKVAKKC 1197
            YAARLGQSF SS ETL+V R E+ VIPDIE+++ +G  YVFSDGIGKI+A FARKVAKKC
Sbjct: 497  YAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFSDGIGKIAASFARKVAKKC 556

Query: 1196 AIQSSIPSAFQIRYGGYKGVVAVDPTSIKKLSLRESMCKYVSQNEKLDVLSWSKFQPCFL 1017
             I+ + PSAFQIRY G+KGV++VDPTS  KLSLR SM KY S + KLDVLSWSK+ PCFL
Sbjct: 557  GIRHT-PSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDTKLDVLSWSKYHPCFL 615

Query: 1016 NRQLITLLSTLGVKDNIFEKKQKEVVDQLNMTLTDPVSAQEALEVMSPGENVNVLKEMLM 837
            NRQLITLLSTLGV+D++FE KQ+E++D+L+   +DP+ AQ+ALE+MSPGEN  +LKEM++
Sbjct: 616  NRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQALELMSPGENTKILKEMML 675

Query: 836  CGYKPDAEPFLSMMLQAFRAQKLLELRNKTRIFVPNGRSMMGCLDETRTLEYSQVFIQVS 657
            CGYKPD+EPFL MML  FR  KL+ELR K+RIF+PNGR+MMGCLDETR LEY +VF+Q  
Sbjct: 676  CGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGCLDETRNLEYGEVFVQ-- 733

Query: 656  CIGNKQFQGHLPFLIRNNTSEQRTFILEGKVVVAKNPCLHPGDVRVLQAVDVRNLHHMVD 477
            C  ++Q   H   +I       R FI+ G VVVAKNPCLHPGDVRVL AVDV +LHHM+D
Sbjct: 734  CSAHQQL--HDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMID 791

Query: 476  CVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPPCQIEPMDYTPAPPVVMDHDVQIE 297
            CVVFPQKG RPHPNECSGSDLDGDIYFV WDP+LIPP Q+EPMDYTP P  V+DHDV +E
Sbjct: 792  CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTME 851

Query: 296  EVQEYFVNYMVNDSLGIIANAHTVFADQELRKAESDACVELARLFSIAVDFPKTGVPAQI 117
            EVQEYF NYMVNDSLGIIANAHT FAD+E +KA S+ C++LA+LFSIAVDFPKTGVPA I
Sbjct: 852  EVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI 911

Query: 116  PPHLYVKEYPDFMDKRDKPTYESKHVIGKLFREVKDI 6
            P +L VKEYPDFMDK DK TYES++V+GKLFR +  I
Sbjct: 912  PANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSI 948