BLASTX nr result

ID: Cocculus22_contig00002799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00002799
         (500 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006383307.1| hypothetical protein POPTR_0005s14320g [Popu...    42   2e-06
ref|XP_003619287.1| Cc-nbs-lrr resistance protein [Medicago trun...    45   4e-06
ref|XP_006388703.1| hypothetical protein POPTR_0115s00220g [Popu...    41   5e-06

>ref|XP_006383307.1| hypothetical protein POPTR_0005s14320g [Populus trichocarpa]
            gi|550338914|gb|ERP61104.1| hypothetical protein
            POPTR_0005s14320g [Populus trichocarpa]
          Length = 1005

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 24/61 (39%), Positives = 35/61 (57%)
 Frame = +2

Query: 65   SSLEYLKIGYFGGDEMDLYMEEEITHLLSLQTLKIFGCKNLTRLPESMRSLTNLQTLLTA 244
            SSL  L I Y    +    + E + HL +L+ L +FGC  L  LPES++ LT+L++L   
Sbjct: 887  SSLRRLSIKYC---DQFASLSEGVRHLTALEDLSLFGCPELNSLPESIQHLTSLRSLSIC 943

Query: 245  L 247
            L
Sbjct: 944  L 944



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 232  IVDCPRLSIQRYAKATGDCWPHIAHIPHVSIRE 330
            I +CP L  +R AK  G+ WP IAHIP + I +
Sbjct: 970  IDECPNLE-KRCAKKRGEDWPKIAHIPSIQIND 1001


>ref|XP_003619287.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355494302|gb|AES75505.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 600

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 24/57 (42%), Positives = 34/57 (59%)
 Frame = +2

Query: 68  SLEYLKIGYFGGDEMDLYMEEEITHLLSLQTLKIFGCKNLTRLPESMRSLTNLQTLL 238
           SL+ L + +F       Y+ E +  + SLQ L+IF C N+  LP S ++LTNL TLL
Sbjct: 477 SLQNLSLAHFH------YLPESLGAMTSLQRLEIFSCANVMSLPNSFQNLTNLHTLL 527



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 232 IVDCPRLSIQRYAKATGDCWPHIAHIPHVSIRE 330
           IV CP L  +R  K TG+ W  I+H+P + + E
Sbjct: 528 IVGCPMLE-KRCKKGTGEDWHKISHVPELELTE 559


>ref|XP_006388703.1| hypothetical protein POPTR_0115s00220g [Populus trichocarpa]
            gi|550310685|gb|ERP47617.1| hypothetical protein
            POPTR_0115s00220g [Populus trichocarpa]
          Length = 1133

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +2

Query: 65   SSLEYLKIGYFGGDEMDLYMEEEITHLLSLQTLKIFGCKNLTRLPESMRSLTNLQTL 235
            ++LE LK+ +    E++  + E I HL SLQ+L I+GCK L  LP  +  LT+LQ L
Sbjct: 1024 TALEVLKLDFC--PELNS-LPESIQHLTSLQSLIIWGCKGLASLPNQIGHLTSLQYL 1077



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 232  IVDCPRLSIQRYAKATGDCWPHIAHIPHVSIR 327
            I DCP L  +R  K  G+ WP IAHIP + IR
Sbjct: 1103 IWDCPNLK-KRCEKDLGEDWPTIAHIPRIRIR 1133


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