BLASTX nr result

ID: Cocculus22_contig00002524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00002524
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266454.2| PREDICTED: uncharacterized protein LOC100246...    63   4e-08
ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [...    61   2e-07
emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]    61   2e-07
ref|XP_004236782.1| PREDICTED: uncharacterized protein LOC101246...    59   7e-07
ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    56   6e-06
ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207...    56   6e-06
ref|XP_006487710.1| PREDICTED: RNA-binding protein 42-like [Citr...    55   8e-06

>ref|XP_002266454.2| PREDICTED: uncharacterized protein LOC100246648 [Vitis vinifera]
          Length = 257

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 217 TSASNPSASTQFTYANGSYFPLPFHLQQSDSMAA-QQYPPNNKXXXXXXXXXXXXXXXXX 393
           +++S+ S+S+QFTY+N SYFPLPFHLQQSD MAA  QYP                     
Sbjct: 5   SASSSTSSSSQFTYSNASYFPLPFHLQQSDPMAAVSQYP----KPYVAPPPPPVQVPVPP 60

Query: 394 XXXXXLSSVYPAPAPVPG 447
                ++ VYPAPAPV G
Sbjct: 61  VKIPAVAPVYPAPAPVAG 78


>ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [Vitis vinifera]
          Length = 257

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +1

Query: 202 MATDPTSASNPSASTQFTYANGSYFPLPFHLQQSDSMAAQQYP 330
           M +   S+S+ S+S+QFTY+N SYFPLPFHLQQS  MA  QYP
Sbjct: 1   MTSTSASSSSSSSSSQFTYSNASYFPLPFHLQQSGPMAVSQYP 43


>emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]
          Length = 257

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +1

Query: 202 MATDPTSASNPSASTQFTYANGSYFPLPFHLQQSDSMAAQQYP 330
           M +   S+S+ S+S+QFTY+N SYFPLPFHLQQS  MA  QYP
Sbjct: 1   MTSTSASSSSSSSSSQFTYSNASYFPLPFHLQQSGPMAVSQYP 43


>ref|XP_004236782.1| PREDICTED: uncharacterized protein LOC101246335 [Solanum
           lycopersicum]
          Length = 274

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
 Frame = +1

Query: 130 PRFPIQSHQHS-LP--IFFKHQFQQIAMATDP-TSASNPSASTQFTYANGSYFPLPFHLQ 297
           P F I +H +S +P     K QF  + M++ P TSA+  S+S+QFTY+NG+YFP PFHLQ
Sbjct: 5   PFFRIFNHNNSQIPNLAIGKSQFTGVTMSSMPSTSAAATSSSSQFTYSNGTYFPTPFHLQ 64

Query: 298 QSDSMAAQQYPPNNKXXXXXXXXXXXXXXXXXXXXXXLSSVYPAPAPVPG 447
           Q         PP                         + SVYPAPA +PG
Sbjct: 65  QQ--------PPQ-----------PYIGAAPPPVQLPVPSVYPAPAAIPG 95


>ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207945
           [Cucumis sativus]
          Length = 253

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/77 (46%), Positives = 41/77 (53%)
 Frame = +1

Query: 214 PTSASNPSASTQFTYANGSYFPLPFHLQQSDSMAAQQYPPNNKXXXXXXXXXXXXXXXXX 393
           P+SAS+ SAS QFTY+NGSYFPLPFHLQQS   A    PP                    
Sbjct: 8   PSSASSSSAS-QFTYSNGSYFPLPFHLQQS---APAPAPPQ-------YSSPYVAPPGPP 56

Query: 394 XXXXXLSSVYPAPAPVP 444
                ++ VYPAPAP P
Sbjct: 57  PVPLPVAPVYPAPAPPP 73


>ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207945 [Cucumis sativus]
          Length = 253

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/77 (46%), Positives = 41/77 (53%)
 Frame = +1

Query: 214 PTSASNPSASTQFTYANGSYFPLPFHLQQSDSMAAQQYPPNNKXXXXXXXXXXXXXXXXX 393
           P+SAS+ SAS QFTY+NGSYFPLPFHLQQS   A    PP                    
Sbjct: 8   PSSASSSSAS-QFTYSNGSYFPLPFHLQQS---APAPAPPQ-------YSSPYVAPPGPP 56

Query: 394 XXXXXLSSVYPAPAPVP 444
                ++ VYPAPAP P
Sbjct: 57  PVPLPVAPVYPAPAPPP 73


>ref|XP_006487710.1| PREDICTED: RNA-binding protein 42-like [Citrus sinensis]
          Length = 274

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/82 (42%), Positives = 44/82 (53%)
 Frame = +1

Query: 88  PLSPRKKFNPQNPNPRFPIQSHQHSLPIFFKHQFQQIAMATDPTSASNPSASTQFTYANG 267
           PL+ R    P    P+FP  S+  S+P       Q  + +   T A+ P+A T    AN 
Sbjct: 6   PLNDRT-LEPSISKPQFPNLSNPMSMP-------QSSSSSGQFTYAAAPAAPTT---ANS 54

Query: 268 SYFPLPFHLQQSDSMAAQQYPP 333
           SYFPLPFHLQQ+D  A  QYPP
Sbjct: 55  SYFPLPFHLQQTDPTAVSQYPP 76


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