BLASTX nr result

ID: Cocculus22_contig00002473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00002473
         (500 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300685.2| hypothetical protein POPTR_0002s01920g [Popu...    58   2e-06
ref|XP_002307746.2| hypothetical protein POPTR_0005s26570g [Popu...    56   5e-06

>ref|XP_002300685.2| hypothetical protein POPTR_0002s01920g [Populus trichocarpa]
           gi|550344086|gb|EEE79958.2| hypothetical protein
           POPTR_0002s01920g [Populus trichocarpa]
          Length = 298

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -3

Query: 498 RGRGRGGYNGPHADTQQDAGGYNYEAPAH-XXXXXXXXXXXXXRNFRSNGPI 346
           RGRGRGG+NGPHADTQQD GG+NYE P                R FRSNGPI
Sbjct: 244 RGRGRGGFNGPHADTQQD-GGHNYEGPPQGRGRGRGRGNRGRGRGFRSNGPI 294


>ref|XP_002307746.2| hypothetical protein POPTR_0005s26570g [Populus trichocarpa]
           gi|550339790|gb|EEE94742.2| hypothetical protein
           POPTR_0005s26570g [Populus trichocarpa]
          Length = 250

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/52 (57%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 498 RGRGRGGYNGPHADTQQDAGGYNYEAPAH-XXXXXXXXXXXXXRNFRSNGPI 346
           RGRGRGG+N PH DTQQD GGYNY+AP                R FRSNGPI
Sbjct: 196 RGRGRGGFNAPHGDTQQD-GGYNYDAPPQGRGRGRGRGNRGRGRGFRSNGPI 246


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