BLASTX nr result
ID: Cocculus22_contig00002230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00002230
(2254 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 94 2e-16
ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M... 86 2e-16
ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Popu... 89 9e-15
ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citr... 87 3e-14
ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Popu... 87 3e-14
ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobr... 87 3e-14
ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobr... 87 3e-14
ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sine... 87 3e-14
ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 87 3e-14
ref|XP_007134398.1| hypothetical protein PHAVU_010G044700g [Phas... 87 3e-14
ref|XP_004515317.1| PREDICTED: nucleolin-like isoform X1 [Cicer ... 86 7e-14
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 86 7e-14
ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 85 1e-13
ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanu... 82 8e-13
ref|XP_004492906.1| PREDICTED: nucleolin-like [Cicer arietinum] 81 2e-12
ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302... 81 2e-12
ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258... 81 2e-12
ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258... 81 2e-12
ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanu... 80 3e-12
ref|XP_003552481.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 80 3e-12
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 94.4 bits (233), Expect = 2e-16
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY +AS+RQSRARLDY A ASQY D Y DRLGRS LGYGGSRSS+S+Q+SHG+Y
Sbjct: 688 VPPRYADASVRQSRARLDYEMSAGASQYGDAYGDRLGRSNLGYGGSRSSMSSQDSHGLY 746
>ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
gi|355502103|gb|AES83306.1| Heterogeneous nuclear
ribonucleoprotein Q [Medicago truncatula]
Length = 824
Score = 86.3 bits (212), Expect(2) = 2e-16
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYG-GSRSSLSAQESHGVY 177
VPPRY + RQSRARL+Y G SASQY D Y DR+GRS LGYG GSRSS+S Q+SHGVY
Sbjct: 674 VPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVY 733
Score = 28.5 bits (62), Expect(2) = 2e-16
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 221 MLGGCTLQATVVITCLVALMLVTAPIPLSI 310
ML CT Q VIT LV +ML A I L I
Sbjct: 763 MLEACTHQVMAVITFLVEMMLAAAHIHLCI 792
>ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Populus trichocarpa]
gi|550344986|gb|EEE81774.2| hypothetical protein
POPTR_0002s14050g [Populus trichocarpa]
Length = 784
Score = 89.0 bits (219), Expect = 9e-15
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
+PPRY +A +R SR RLDY G+SASQY D Y DRLGRS GYGGSRSS+S+Q+SHG+Y
Sbjct: 665 IPPRYADAGVRHSRPRLDYELGSSASQYGDAYGDRLGRSAAGYGGSRSSISSQDSHGMY 723
>ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citrus clementina]
gi|567905934|ref|XP_006445455.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819727|ref|XP_006464397.1| PREDICTED: nucleolin
isoform X1 [Citrus sinensis]
gi|568819729|ref|XP_006464398.1| PREDICTED: nucleolin
isoform X2 [Citrus sinensis]
gi|568819731|ref|XP_006464399.1| PREDICTED: nucleolin
isoform X3 [Citrus sinensis] gi|557547716|gb|ESR58694.1|
hypothetical protein CICLE_v10018944mg [Citrus
clementina] gi|557547717|gb|ESR58695.1| hypothetical
protein CICLE_v10018944mg [Citrus clementina]
Length = 776
Score = 87.4 bits (215), Expect = 3e-14
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY + +R SRARLDY G A QY D Y DR+GRS LGYGGSRSS+S+Q+SHG+Y
Sbjct: 652 VPPRYADPGVRHSRARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHGLY 710
>ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Populus trichocarpa]
gi|550323501|gb|ERP52979.1| hypothetical protein
POPTR_0014s05040g [Populus trichocarpa]
Length = 785
Score = 87.4 bits (215), Expect = 3e-14
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
+PPRY +A R SR RLDY G+ ASQY D YSDRLGRS +GYGGSR+S+S+Q+SHG+Y
Sbjct: 668 IPPRYADAGARHSRPRLDYELGSRASQYGDAYSDRLGRSAVGYGGSRNSISSQDSHGMY 726
>ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508704643|gb|EOX96539.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 802
Score = 87.4 bits (215), Expect = 3e-14
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY +A R SRARLDY A Y DTY DRLGRS LGYGGSRSS+S+Q+SHG+Y
Sbjct: 682 VPPRYADAGARHSRARLDYELATGAPPYADTYGDRLGRSSLGYGGSRSSMSSQDSHGLY 740
>ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590724146|ref|XP_007052383.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508704642|gb|EOX96538.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508704644|gb|EOX96540.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 808
Score = 87.4 bits (215), Expect = 3e-14
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY +A R SRARLDY A Y DTY DRLGRS LGYGGSRSS+S+Q+SHG+Y
Sbjct: 682 VPPRYADAGARHSRARLDYELATGAPPYADTYGDRLGRSSLGYGGSRSSMSSQDSHGLY 740
>ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sinensis]
gi|567905936|ref|XP_006445456.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819733|ref|XP_006464400.1| PREDICTED: nucleolin
isoform X4 [Citrus sinensis] gi|359386142|gb|AEV43360.1|
RNA recognition motif protein 1 [Citrus sinensis]
gi|557547718|gb|ESR58696.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
Length = 775
Score = 87.4 bits (215), Expect = 3e-14
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY + +R SRARLDY G A QY D Y DR+GRS LGYGGSRSS+S+Q+SHG+Y
Sbjct: 652 VPPRYADPGVRHSRARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHGLY 710
>ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571445111|ref|XP_006576704.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 816
Score = 87.4 bits (215), Expect = 3e-14
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGY-GGSRSSLSAQESHGVY 177
VPPRY + RQSRARLDY G SASQY D Y DRLGRS +GY GGSRSS+S+Q+SHG+Y
Sbjct: 690 VPPRYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGGSRSSISSQDSHGLY 749
>ref|XP_007134398.1| hypothetical protein PHAVU_010G044700g [Phaseolus vulgaris]
gi|593264442|ref|XP_007134399.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|593264444|ref|XP_007134400.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007443|gb|ESW06392.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007444|gb|ESW06393.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007445|gb|ESW06394.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
Length = 818
Score = 87.0 bits (214), Expect = 3e-14
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGG-SRSSLSAQESHGVY 177
VPPRY + RQSRARLDY G SASQY D Y DRLGRS +GYGG SRSS+S Q+SHG+Y
Sbjct: 693 VPPRYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGSSRSSMSGQDSHGMY 752
>ref|XP_004515317.1| PREDICTED: nucleolin-like isoform X1 [Cicer arietinum]
gi|502173391|ref|XP_004515318.1| PREDICTED:
nucleolin-like isoform X2 [Cicer arietinum]
Length = 799
Score = 85.9 bits (211), Expect = 7e-14
Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGY-GGSRSSLSAQESHGVY 177
VPPRY + RQSRARL+Y G +ASQY D+YSDR+GRS LGY GGSRSS+S Q+SHG+Y
Sbjct: 673 VPPRYADTGARQSRARLEYDYGGNASQYGDSYSDRVGRSSLGYGGGSRSSISGQDSHGMY 732
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein,
putative [Ricinus communis]
Length = 784
Score = 85.9 bits (211), Expect = 7e-14
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 VPPRYTE--ASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGV 174
VPPRY + A R SRARLDY G SASQY D Y DR+GRS +GYGGSRSSLS+Q+SHG+
Sbjct: 659 VPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSLSSQDSHGL 718
Query: 175 Y 177
Y
Sbjct: 719 Y 719
>ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571465910|ref|XP_006583511.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 819
Score = 85.1 bits (209), Expect = 1e-13
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGY-GGSRSSLSAQESHGVY 177
+PPRY + RQSRARLDY G SASQY D Y DRLGRS +GY GGSRSS+S+Q+SHG+Y
Sbjct: 693 LPPRYADTGARQSRARLDYDYGDSASQYGDAYGDRLGRSSVGYGGGSRSSISSQDSHGMY 752
>ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanum tuberosum]
Length = 773
Score = 82.4 bits (202), Expect = 8e-13
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGA-SASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
V PRY EA +R SRARLDY G+ S S Y D Y+DRLGRS LGYGGSR SLS Q+SHG+Y
Sbjct: 653 VHPRYAEAGVRHSRARLDYELGSGSGSHYGDAYADRLGRSNLGYGGSRGSLSGQDSHGMY 712
>ref|XP_004492906.1| PREDICTED: nucleolin-like [Cicer arietinum]
Length = 791
Score = 81.3 bits (199), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
+ PRY +AS RQSR+RLDY G SAS+Y + Y DRLGRS LGY GSRSS+S Q SH Y
Sbjct: 665 ISPRYADASARQSRSRLDYDYGGSASKYKEAYGDRLGRSSLGYSGSRSSISIQNSHETY 723
>ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302396 [Fragaria vesca
subsp. vesca]
Length = 801
Score = 80.9 bits (198), Expect = 2e-12
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY +A +RQSRARLDY G+ +SQY D YSDR+GRS LGYG SR+S Q+SHG+Y
Sbjct: 680 VPPRYADAGIRQSRARLDYEYGSGSSQYGDGYSDRVGRSSLGYGSSRTS---QDSHGLY 735
>ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258799 isoform 2 [Solanum
lycopersicum]
Length = 767
Score = 80.9 bits (198), Expect = 2e-12
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGA-SASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
V PRY EA ++ SRARLDY G+ S S Y D+Y DRLGRS LGYGGSR SLS Q+SHG+Y
Sbjct: 647 VHPRYAEAGVQHSRARLDYELGSGSGSHYGDSYGDRLGRSNLGYGGSRGSLSGQDSHGMY 706
>ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258799 isoform 1 [Solanum
lycopersicum]
Length = 793
Score = 80.9 bits (198), Expect = 2e-12
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGA-SASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
V PRY EA ++ SRARLDY G+ S S Y D+Y DRLGRS LGYGGSR SLS Q+SHG+Y
Sbjct: 673 VHPRYAEAGVQHSRARLDYELGSGSGSHYGDSYGDRLGRSNLGYGGSRGSLSGQDSHGMY 732
>ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343584|ref|XP_006338910.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 785
Score = 80.5 bits (197), Expect = 3e-12
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGA-SASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
V P Y EA +R SRARLDY G+ S S Y D Y DRLGRS LGYGG+RSS+S Q+SHG+Y
Sbjct: 664 VHPHYAEAGMRHSRARLDYELGSGSGSHYGDAYGDRLGRSNLGYGGNRSSISRQDSHGIY 723
>ref|XP_003552481.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571548836|ref|XP_006602855.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 785
Score = 80.5 bits (197), Expect = 3e-12
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +1
Query: 1 VPPRYTEASLRQSRARLDYGAGASASQYVDTYSDRLGRSELGYGGSRSSLSAQESHGVY 177
VPPRY + S RQSR+RL+Y G SASQY D Y DRLGRS LGY GSR+S+S+Q+ HG Y
Sbjct: 662 VPPRY-DTSARQSRSRLNYDYGGSASQYGDAYGDRLGRSSLGYSGSRNSISSQDLHGTY 719