BLASTX nr result

ID: Cocculus22_contig00001450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00001450
         (375 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Popu...    56   6e-06

>ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Populus trichocarpa]
           gi|550344063|gb|EEE79947.2| hypothetical protein
           POPTR_0002s01590g [Populus trichocarpa]
          Length = 393

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   LAFCKPGRSTEWIKIVTHLNPFL-DAAFYRGSFYSVNFRGRLVVVCDL-GTEPKVKEVLS 175
           LA+CK G   E   IV +   F  D  ++ G FY+VN  G+ +VVCD+ G  PKV   + 
Sbjct: 193 LAYCKNG--DECWNIVENSRSFSEDVIYFNGLFYAVNKAGQ-IVVCDVNGNSPKVS-FIE 248

Query: 176 GPKSLSGARTYLVDTSEALLLVARDTQLNKTDCVTFGFKVYIQVESGSGKTSDHKLEWKR 355
            P+ + G   YLV + + LLLV R   L+    V F   +Y        K   +   W+R
Sbjct: 249 TPRQIGGDMQYLVSSGDGLLLVTRYLDLD----VEFDIFIYKTARFEVFKLDLNGPRWER 304

Query: 356 VTNL 367
           VT+L
Sbjct: 305 VTSL 308


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