BLASTX nr result
ID: Cocculus22_contig00001431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00001431
(1806 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera] 155 4e-35
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p... 119 6e-24
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg... 108 8e-21
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa... 99 5e-18
tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II fa... 99 8e-18
gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidas... 99 8e-18
gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sor... 99 8e-18
gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondr... 99 8e-18
gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sor... 99 8e-18
ref|XP_006828094.1| hypothetical protein AMTR_s00151p00074930 [A... 97 2e-17
tpg|DAA46810.1| TPA: hypothetical protein ZEAMMB73_014568 [Zea m... 68 2e-08
ref|XP_006366725.1| PREDICTED: cytochrome c oxidase subunit 2-li... 59 9e-06
>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
Length = 201
Score = 155 bits (393), Expect = 4e-35
Identities = 83/142 (58%), Positives = 89/142 (62%)
Frame = +2
Query: 101 VVREASGLPVISYSRRRETIKTIACQKRGVEVVRPIPRNAPKEPMVPFLLLLEVHIPLLG 280
+VREASGLPVIS+SRRRET+ TIACQKRGVEVVRPIPRNAP +L++
Sbjct: 1 MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSILVV-------- 52
Query: 281 VERYTRNRCSACNVR*RR*SSESIGTTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTT 460
VAYNFGPNGRP NLSEWGIPVGNNHGSSCGTT
Sbjct: 53 --------------------------AGVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTT 86
Query: 461 GPGEDNXXXXXXXXRFGDGGPT 526
GPGEDN RFGDGGPT
Sbjct: 87 GPGEDNLLFLLLFLRFGDGGPT 108
>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
Length = 70
Score = 119 bits (297), Expect = 6e-24
Identities = 60/70 (85%), Positives = 61/70 (87%)
Frame = +3
Query: 318 MSDNGAEVVNLSAPLQWHTTLDLTAGPVTFRNGGSPLATTTVVVAELLGRERTTXXXXXX 497
MSDNGA VVNLSAP QWHTTLDL AGPVTFRNGGSPLATTTVVVAELLG+ERTT
Sbjct: 1 MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSS 60
Query: 498 FFASGTEVLR 527
FFASGTEVLR
Sbjct: 61 FFASGTEVLR 70
>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
gi|346683133|ref|YP_004842062.1| hypothetical protein
BemaM_p014 [Beta macrocarpa]
gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
hypothetical protein [Beta macrocarpa]
gi|384939217|emb|CBL52063.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 178
Score = 108 bits (270), Expect = 8e-21
Identities = 54/66 (81%), Positives = 57/66 (86%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTG---GSRSIWLTGNLLFPSSRDYKNYS 171
VVVDPAITIKAIGHQWYRSAPL+EG LSATKC S+SIWLTGNL FPSSRD+ NYS
Sbjct: 113 VVVDPAITIKAIGHQWYRSAPLHEGDLSATKCLKVEYSSQSIWLTGNLPFPSSRDFSNYS 172
Query: 172 MPETGS 189
MPETGS
Sbjct: 173 MPETGS 178
>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
mays]
Length = 510
Score = 99.4 bits (246), Expect = 5e-18
Identities = 46/60 (76%), Positives = 46/60 (76%)
Frame = +2
Query: 356 TTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGN 535
T AVAYNFGP GRPR LSEWGIPVGNNHGSSCGTTGP EDN RFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416
Score = 66.6 bits (161), Expect = 3e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTG 102
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTG
Sbjct: 325 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTG 358
>tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
mays]
Length = 354
Score = 98.6 bits (244), Expect = 8e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSIWLTGNLLFPSSRD 156
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 303 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 354
>gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidase subunit II
family protein [Zea mays]
Length = 375
Score = 98.6 bits (244), Expect = 8e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSIWLTGNLLFPSSRD 156
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 324 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 375
>gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sorghum bicolor]
Length = 131
Score = 98.6 bits (244), Expect = 8e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSIWLTGNLLFPSSRD 156
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 80 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 131
>gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondrion) [Sorghum
bicolor]
Length = 158
Score = 98.6 bits (244), Expect = 8e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSIWLTGNLLFPSSRD 156
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 107 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 158
>gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sorghum bicolor]
Length = 163
Score = 98.6 bits (244), Expect = 8e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSIWLTGNLLFPSSRD 156
V+VDPAITIKAIGHQWYRSAPL EG LSATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 112 VLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 163
>ref|XP_006828094.1| hypothetical protein AMTR_s00151p00074930 [Amborella trichopoda]
gi|548832740|gb|ERM95510.1| hypothetical protein
AMTR_s00151p00074930 [Amborella trichopoda]
Length = 160
Score = 97.4 bits (241), Expect = 2e-17
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +2
Query: 401 NLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGNSRHKQLYRRGPALLL 580
+LS+WGIP+GNNHGSSC TTGPGE+N RFGDGGPTV NSRHK L RRGPALLL
Sbjct: 87 DLSKWGIPIGNNHGSSCETTGPGEENQLFLVLCLRFGDGGPTVCNSRHKALDRRGPALLL 146
Query: 581 L 583
L
Sbjct: 147 L 147
>tpg|DAA46810.1| TPA: hypothetical protein ZEAMMB73_014568 [Zea mays]
Length = 380
Score = 67.8 bits (164), Expect = 2e-08
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +1
Query: 1 VVVDPAITIKAIGHQWYRSAPLYEGYLSATKCTGGSRSI 117
V VD AITIKAIGHQWYRSAPL +G LSATKC GGSRSI
Sbjct: 342 VFVDAAITIKAIGHQWYRSAPLNKGDLSATKCIGGSRSI 380
>ref|XP_006366725.1| PREDICTED: cytochrome c oxidase subunit 2-like, partial [Solanum
tuberosum]
Length = 164
Score = 58.5 bits (140), Expect = 9e-06
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +3
Query: 1704 FSKSMGVESFLRGN*QVQFGGRRASTQPYEYSDY 1805
F +GVESFLRGN QVQFGGRRAST PYEYSDY
Sbjct: 5 FFLRVGVESFLRGNLQVQFGGRRASTLPYEYSDY 38