BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00001328
         (1440 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun...   358   4e-96
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   353   1e-94
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   346   1e-92
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...   344   5e-92
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   334   7e-89
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]           332   2e-88
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp...   327   8e-87
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   323   9e-86
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr...   323   1e-85
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   323   2e-85
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A...   322   2e-85
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   322   3e-85
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr...   322   3e-85
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr...   320   8e-85
ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   319   2e-84
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr...   319   2e-84
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   318   3e-84
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    315   2e-83
ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [S...   314   5e-83
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   314   7e-83

>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
           gi|462401286|gb|EMJ06843.1| hypothetical protein
           PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  358 bits (918), Expect = 4e-96
 Identities = 183/259 (70%), Positives = 211/259 (81%), Gaps = 6/259 (2%)
 Frame = +3

Query: 147 ALIFSKPTNVSISSISP------LKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQE 308
           AL   KPT+V   S+S        KP S ISA+FL   R ++ SSRFVRNVAVSSEF+Q+
Sbjct: 41  ALYTPKPTSVPFYSVSSSSLTLGCKPIS-ISASFLNSGRFQSASSRFVRNVAVSSEFEQD 99

Query: 309 EDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFG 488
           E+V  ++GE +F+PDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSRGFG
Sbjct: 100 EEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGRSRGFG 159

Query: 489 FVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPRGGASFDASNRVYVG 668
           FVTMS+ +E E AA+Q NGYEL+GR LRVNYGPPPP+ +   RG RGG   D+SNR+YVG
Sbjct: 160 FVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGSDSSNRLYVG 219

Query: 669 NLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVD 848
           NLAWGVD+LALE LF EQGKV+EAKVVYDRDSG+SRGFGFVT+  A+E++SA+ SLDGVD
Sbjct: 220 NLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAMESLDGVD 279

Query: 849 LNGRPIRVTVAESRPRRQF 905
           LNGR IRVT AE RPRRQF
Sbjct: 280 LNGRSIRVTAAEPRPRRQF 298


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  353 bits (906), Expect = 1e-94
 Identities = 189/277 (68%), Positives = 217/277 (78%), Gaps = 23/277 (8%)
 Frame = +3

Query: 144 KALIFSKPTNVSISSISPLKPFSSISAAF------LPPSRRE--AVSSRFVRNVAVSSEF 299
           K L  SKPT+VS  S+    PFS  S         L PS R    +SSRFVRNVAVSS++
Sbjct: 16  KTLAISKPTSVSFFSL----PFSCSSLKLHSNSISLSPSSRGFLTLSSRFVRNVAVSSDY 71

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           +Q+EDV  +EGE +FSPDLKLFVGNLPF VDSA LAGLFEQAGNVEMVEVIYDK TGRSR
Sbjct: 72  EQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSR 131

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPK---------------EDSPS 614
           GFGFVTMST EEVEAAAQQFNGYELEGR LRVN GPPP +               E++  
Sbjct: 132 GFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNF 191

Query: 615 RGPRGGASFDASNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVT 794
           RGPRGGA+ +++NR+YVGNL+WGVDDLALETLF EQGKV EA+V+YDR++G+SRGFGFVT
Sbjct: 192 RGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVT 251

Query: 795 FSCAEEVDSAISSLDGVDLNGRPIRVTVAESRPRRQF 905
           ++ AEEV+ AI SLDGVDLNGR IRVT+AE+RPRRQF
Sbjct: 252 YNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  346 bits (888), Expect = 1e-92
 Identities = 195/267 (73%), Positives = 215/267 (80%), Gaps = 13/267 (4%)
 Frame = +3

Query: 144 KALIF--SKPTNVSISSISP-----LKPFSSISAAFLPPSRREAVS-SRFVRNVAVSSEF 299
           K L F  SKPT+ S+ S S       KP S IS++F+   +    S SRFVRNVAVSSEF
Sbjct: 17  KTLAFYNSKPTSFSLLSSSSSHKLLAKPIS-ISSSFIHSFQPLPSSPSRFVRNVAVSSEF 75

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           DQEED+  +E   NFSPDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSR
Sbjct: 76  DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPP-KEDSPSRGPRG---GASFDA 647
           GFGFVTMS+ EEVEAAAQQFNGYELEGRPLRVN GPPPP +E+   RGPRG   GA    
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDDLALETLF EQGKV+EAKVVYDR+SG+SRGFGFVT+S AEEVD+AI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 828 SSLDGVDLNGRPIRVTVAESRP-RRQF 905
            SL+GVDL GR IRV+VAE+RP RRQF
Sbjct: 256 DSLNGVDLAGRAIRVSVAEARPQRRQF 282


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score =  344 bits (883), Expect = 5e-92
 Identities = 176/253 (69%), Positives = 213/253 (84%), Gaps = 3/253 (1%)
 Frame = +3

Query: 156 FSKPTNV---SISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSDE 326
           +SKP ++   S SS S LKP S + +      +++ +SSRF++NVA+SSEF QEED   +
Sbjct: 24  YSKPNSLFFLSPSSTSSLKPVSLLLSF---QHQQQPLSSRFLKNVAISSEFGQEEDFLSD 80

Query: 327 EGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMST 506
             E++FS DLKLFVGNLPF VDSA+LAGLFE AGNVEMVEVIYDK TGRSRGFGFVTM+T
Sbjct: 81  GDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTT 140

Query: 507 AEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPRGGASFDASNRVYVGNLAWGV 686
            EEVEAA++QFNGYEL+GR LRVN+GPPP KE S SRGPRGG +FD+ NRVYVGNL+W V
Sbjct: 141 IEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNRVYVGNLSWNV 200

Query: 687 DDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVDLNGRPI 866
           D+LALETLF E+G+VM+AKVVYDRDSG+SRGFGFVT+S AEEVD+AI SL+G +L+GR I
Sbjct: 201 DNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAI 260

Query: 867 RVTVAESRPRRQF 905
           RV+VAE++PRRQF
Sbjct: 261 RVSVAEAKPRRQF 273


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  334 bits (856), Expect = 7e-89
 Identities = 187/264 (70%), Positives = 213/264 (80%), Gaps = 11/264 (4%)
 Frame = +3

Query: 147 ALIFSKPTNVSI---SSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDV 317
           AL   KPT+VS+   SS S LKP S ISA+FL   +    S  FVR+VAVS +F+Q+E+V
Sbjct: 19  ALYSPKPTSVSLFSLSSFSSLKPIS-ISASFLSSGK---ASRSFVRHVAVS-DFEQDEEV 73

Query: 318 -SDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFV 494
            S +E E NFSPDLKLFVGNLPF VDSAQLA LFE AGNVEMVEVIYDK TGRSRGFGFV
Sbjct: 74  LSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFV 133

Query: 495 TMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRG-----PRGGASF-DASNR 656
           TMS+A+EVEAAA+QFNGYEL+GR LRVNYGPPPP+ +   RG     PRGG  + D+SNR
Sbjct: 134 TMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRGGGGYGDSSNR 193

Query: 657 VYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSL 836
           +YVGNLAWGVD+LALE LF EQGKV+EAKVV+DRDSG+SRGFGFVT+  AEE++SAI SL
Sbjct: 194 LYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEMNSAIESL 253

Query: 837 DGVDLNGRPIRVTVAESR-PRRQF 905
           DGVDL GR IRVT AE R PRRQF
Sbjct: 254 DGVDLGGRSIRVTAAEPRPPRRQF 277


>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
          Length = 296

 Score =  332 bits (852), Expect = 2e-88
 Identities = 183/277 (66%), Positives = 214/277 (77%), Gaps = 24/277 (8%)
 Frame = +3

Query: 147 ALIFSKPTNVSISSI-SPLKPFSS-------ISAAFLPPSRREAVSS----RFVRNVAVS 290
           +L  SKPT++S+SS+ SP   F+S       ++   +       +SS    RFV  VAVS
Sbjct: 20  SLFASKPTSLSLSSLYSPSSSFASLKLYAGNVNVVCVSARGFRGLSSSSPCRFVPKVAVS 79

Query: 291 SEFDQEEDVSDEEGER-NFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFT 467
           SEFDQ+EDV  + GE   FSPDLKLFVGNLPF VDSAQLAGLFE+ GNVEMVEVIYDK T
Sbjct: 80  SEFDQDEDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTT 139

Query: 468 GRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKE-DSPSRGPR------ 626
           GRSRGFGFVTMS+ +EVEAAAQQFNGYELEGRPLRVNYGPPP +E DS  RG R      
Sbjct: 140 GRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGG 199

Query: 627 ----GGASFDASNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVT 794
               GGA ++  NRVYVGNL+WGVD+ ALE+LF EQGKV+EAKVVYDRDSG+SRGFGFVT
Sbjct: 200 GGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVT 259

Query: 795 FSCAEEVDSAISSLDGVDLNGRPIRVTVAESRPRRQF 905
           ++ A+EV+SAI+SL+GVDLNGR IRVT AE++PRR F
Sbjct: 260 YNTADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296


>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 286

 Score =  327 bits (838), Expect = 8e-87
 Identities = 172/265 (64%), Positives = 214/265 (80%), Gaps = 15/265 (5%)
 Frame = +3

Query: 156 FSKPTNVS---ISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSDE 326
           +SKPT++S   +SS S +KP +S+  +F    +++ +SSRF+++VA+SSEF QEEDV  +
Sbjct: 24  YSKPTSLSFLSLSSTSSIKP-ASLFLSF-QQKQQQPLSSRFLKSVAISSEFGQEEDVFGD 81

Query: 327 EGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMST 506
             E +FSPDL+LFVGNLPF V+SAQLA LF+ AGNVEMVEV YDK TGRSRGFGFVTMST
Sbjct: 82  GDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMST 141

Query: 507 AEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSR------------GPRGGASFDAS 650
            EEVEAA+QQFNGYEL+GRPLRVN GPPP +E S SR            G RGG +FD+S
Sbjct: 142 IEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGPGARGGETFDSS 201

Query: 651 NRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAIS 830
           NRVYVGNL+W VDD ALE+LF E+GKVM+AKVVYDRDSG+S+GFGFVT+S AEEV+ A+ 
Sbjct: 202 NRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVEDAVD 261

Query: 831 SLDGVDLNGRPIRVTVAESRPRRQF 905
           SL+G +L+GR IRV+VAE++PRR+F
Sbjct: 262 SLNGAELDGRAIRVSVAEAKPRRRF 286


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  323 bits (829), Expect = 9e-86
 Identities = 171/256 (66%), Positives = 205/256 (80%), Gaps = 7/256 (2%)
 Frame = +3

Query: 159 SKPTNVSIS-SISPLKPFSSISAAFLPPSRRE-AVSSRFVRNVAVSSEFDQEEDVSDEEG 332
           +KP ++S      P+   SS+ ++F+P  ++  + SSRFV +VA+SSEF QEEDVS +  
Sbjct: 25  NKPISLSFKLHAKPISIPSSLFSSFVPLQQQPYSSSSRFVPSVAISSEFGQEEDVSSDGD 84

Query: 333 ERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMSTAE 512
           E +FS DLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSRGFGFVTMS+ +
Sbjct: 85  ESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSID 144

Query: 513 EVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPR-----GGASFDASNRVYVGNLA 677
           EVEAAAQQFNGYELEGR LRVN GPPP +E S SR PR     GG      NR+YVGNL+
Sbjct: 145 EVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLS 204

Query: 678 WGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVDLNG 857
           W VD+LALE+ F EQGKV++AKVVYDR+SG+SRGFGFVT+S AEEV++AI SL+G +L+G
Sbjct: 205 WSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDG 264

Query: 858 RPIRVTVAESRPRRQF 905
           R IRV+VAE+RPRRQF
Sbjct: 265 RAIRVSVAEARPRRQF 280


>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530825|gb|ESR42008.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 271

 Score =  323 bits (828), Expect = 1e-85
 Identities = 187/267 (70%), Positives = 205/267 (76%), Gaps = 13/267 (4%)
 Frame = +3

Query: 144 KALIF--SKPTNVSISSISP-----LKPFSSISAAFLPPSRREAVS-SRFVRNVAVSSEF 299
           K L F  SKPT+ S+ S S       KP S IS++F+   +    S SRFVRNVAVSSEF
Sbjct: 17  KTLAFYNSKPTSFSLLSSSSSHKLLAKPIS-ISSSFIHSFQPLPSSPSRFVRNVAVSSEF 75

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           DQEED+  +E   NFSPDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSR
Sbjct: 76  DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPP-KEDSPSRGPRG---GASFDA 647
           GFGFVTMS+ EEVEAAAQQFNGYELEGRPLRVN GPPPP +E+   RGPRG   GA    
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDDLALETLF EQGKV+EAKVVYDR+SG+SRGFGFVT+S AEE     
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEE----- 250

Query: 828 SSLDGVDLNGRPIRVTVAESRP-RRQF 905
                 DL GR IRV+VAE+RP RRQF
Sbjct: 251 ------DLAGRAIRVSVAEARPQRRQF 271


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  323 bits (827), Expect = 2e-85
 Identities = 176/245 (71%), Positives = 196/245 (80%), Gaps = 4/245 (1%)
 Frame = +3

Query: 183 SSISPLKPFSSISAAFLPPSR-REAVSSRFVRNVAVSSEFDQEEDVSDEEGE-RNFSPDL 356
           SSI  L    SIS+  LP  R     SSRFVRNVAVSS++ QEE   + +G+  +++PDL
Sbjct: 34  SSIRLLSNPISISSFLLPSHRVSPPFSSRFVRNVAVSSDYGQEEGTLEVDGDDSSYAPDL 93

Query: 357 KLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMSTAEEVEAAAQQ 536
           KLFVGNLPF VDSAQLAGLFE AG VE VEVIYDK TGRSRGFGFVTMST  EVEAAAQQ
Sbjct: 94  KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153

Query: 537 FNGYELEGRPLRVNYGPPPPK-EDSPSRGPRGGASFDASNRVYVGNLAWGVDDLALETLF 713
           FNGYEL+GR LRVNYGPPPPK +DS  RG R  + FD  NRV+V NLAWGVDDL LE LF
Sbjct: 154 FNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLF 213

Query: 714 GEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVDLNGRPIRVTVAESR- 890
            E+G V+EAKVVYDRDSGKSRGFGFVT++ AEEV+ AI SLDGVDL+GRPIRVT AE+R 
Sbjct: 214 REKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARP 273

Query: 891 PRRQF 905
           PRRQF
Sbjct: 274 PRRQF 278


>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
           gi|548849631|gb|ERN08390.1| hypothetical protein
           AMTR_s00148p00072380 [Amborella trichopoda]
          Length = 272

 Score =  322 bits (826), Expect = 2e-85
 Identities = 174/259 (67%), Positives = 201/259 (77%), Gaps = 5/259 (1%)
 Frame = +3

Query: 144 KALIFSKPTNVSISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSD 323
           K LI +    +++S  +P    +S   A L  S+R  +   F+R+VAV SEF QEED + 
Sbjct: 18  KTLISTGIRKLTLSLFTPTLSLNSKGRASLSLSKRAPL---FIRSVAVFSEFQQEEDEAP 74

Query: 324 EEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMS 503
            E E NFS DLKLFVGNLPF VDSA+LA LFEQAGNVEMVEVIYDK TGRSRGFGFVTMS
Sbjct: 75  SE-EANFSADLKLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMS 133

Query: 504 TAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPRG-----GASFDASNRVYVG 668
           T EEVEAA QQFNG++ EGR LRVN GPPP +++   RG RG       SFD+ NRVYVG
Sbjct: 134 TVEEVEAAVQQFNGHDFEGRQLRVNSGPPPARDEMSPRGSRGFDSPRPRSFDSPNRVYVG 193

Query: 669 NLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVD 848
           NL+WGVDDLALE LF EQGKVMEAKVVYDR+SG+SRGFGFVT+S AEEV SAIS+L+G D
Sbjct: 194 NLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTAEEVTSAISTLNGAD 253

Query: 849 LNGRPIRVTVAESRPRRQF 905
           L+GRPIRVT AE++PRRQF
Sbjct: 254 LDGRPIRVTPAEAKPRRQF 272


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  322 bits (825), Expect = 3e-85
 Identities = 178/256 (69%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
 Frame = +3

Query: 159 SKPTNVSISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSDE---- 326
           S+ T++S  S+ P     S+S      S     SSRFVR V +S +FDQ EDV D     
Sbjct: 25  SQTTSLSFFSLPPSSLNLSLS------SSSSCFSSRFVRKVTLS-DFDQIEDVEDGDDGV 77

Query: 327 EGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMST 506
           E ERNFSPDLK+FVGNLPF  DSA LA LFE+AGNVEMVEVIYDK TGRSRGFGFVTMS+
Sbjct: 78  EEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSS 137

Query: 507 AEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPS--RGPRGGASFDASNRVYVGNLAW 680
            EEVEAA QQFNGYEL+GR LRVN GPPP K ++ S   G RGG SFD+SNRVYVGNLAW
Sbjct: 138 KEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAW 197

Query: 681 GVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSLDGVDLNGR 860
           GVD  ALETLF EQGKV++AKVVYDRDSG+SRGFGFVT+S AEEV++AI SLDGVDLNGR
Sbjct: 198 GVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 257

Query: 861 PIRVTVAESR-PRRQF 905
            IRV+ AE+R PRRQF
Sbjct: 258 AIRVSPAEARPPRRQF 273


>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530827|gb|ESR42010.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 266

 Score =  322 bits (824), Expect = 3e-85
 Identities = 181/251 (72%), Positives = 199/251 (79%), Gaps = 12/251 (4%)
 Frame = +3

Query: 144 KALIF--SKPTNVSISSISP-----LKPFSSISAAFLPPSRREAVS-SRFVRNVAVSSEF 299
           K L F  SKPT+ S+ S S       KP S IS++F+   +    S SRFVRNVAVSSEF
Sbjct: 17  KTLAFYNSKPTSFSLLSSSSSHKLLAKPIS-ISSSFIHSFQPLPSSPSRFVRNVAVSSEF 75

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           DQEED+  +E   NFSPDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSR
Sbjct: 76  DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPP-KEDSPSRGPRG---GASFDA 647
           GFGFVTMS+ EEVEAAAQQFNGYELEGRPLRVN GPPPP +E+   RGPRG   GA    
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDDLALETLF EQGKV+EAKVVYDR+SG+SRGFGFVT+S AEEVD+AI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 828 SSLDGVDLNGR 860
            SL+GV   GR
Sbjct: 256 DSLNGVVRFGR 266



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 57/91 (62%)
 Frame = +3

Query: 630 GASFDASNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAE 809
           G++F    +++VGNL + VD   L  LF   G V   +V+YD+ +G+SRGFGFVT S  E
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 810 EVDSAISSLDGVDLNGRPIRVTVAESRPRRQ 902
           EV++A    +G +L GRP+RV      PRR+
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177


>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530824|gb|ESR42007.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 297

 Score =  320 bits (821), Expect = 8e-85
 Identities = 179/246 (72%), Positives = 197/246 (80%), Gaps = 12/246 (4%)
 Frame = +3

Query: 144 KALIF--SKPTNVSISSISP-----LKPFSSISAAFLPPSRREAVS-SRFVRNVAVSSEF 299
           K L F  SKPT+ S+ S S       KP S IS++F+   +    S SRFVRNVAVSSEF
Sbjct: 17  KTLAFYNSKPTSFSLLSSSSSHKLLAKPIS-ISSSFIHSFQPLPSSPSRFVRNVAVSSEF 75

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           DQEED+  +E   NFSPDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSR
Sbjct: 76  DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPP-KEDSPSRGPRG---GASFDA 647
           GFGFVTMS+ EEVEAAAQQFNGYELEGRPLRVN GPPPP +E+   RGPRG   GA    
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDDLALETLF EQGKV+EAKVVYDR+SG+SRGFGFVT+S AEEVD+AI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 828 SSLDGV 845
            SL+GV
Sbjct: 256 DSLNGV 261



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 57/91 (62%)
 Frame = +3

Query: 630 GASFDASNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAE 809
           G++F    +++VGNL + VD   L  LF   G V   +V+YD+ +G+SRGFGFVT S  E
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 810 EVDSAISSLDGVDLNGRPIRVTVAESRPRRQ 902
           EV++A    +G +L GRP+RV      PRR+
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177


>ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
           italica]
          Length = 265

 Score =  319 bits (818), Expect = 2e-84
 Identities = 164/263 (62%), Positives = 202/263 (76%), Gaps = 10/263 (3%)
 Frame = +3

Query: 147 ALIFSKPTNVSISSISPLKPFSSISAAFLP---PSRREAVSSRFVRN---VAVSSEFDQE 308
           A +FS   +    ++S  KP +++++AFLP   P R  +   R V     VAVSSE++ E
Sbjct: 3   AALFSTSLSPRFLALSSPKPAATVASAFLPFRLPLRAVSAPGRRVFEPVAVAVSSEYETE 62

Query: 309 EDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFG 488
               +EEG   FS DLKLFVGNLPF VDSAQLAGLFEQAG+VEMVEV+YD+ TGRSRGFG
Sbjct: 63  GAEQEEEGAEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFG 122

Query: 489 FVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPRGGAS----FDASNR 656
           FVTMS+AEE  AA +QFNGY  +GRPLRVN GPPPP++DS  R PRGG       D+ N+
Sbjct: 123 FVTMSSAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDSAPRAPRGGGGGGNFVDSGNK 182

Query: 657 VYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAISSL 836
           VYVGNL+WGVD+  LE LF EQG+V++AKV+YDR+SG+SRGFGFVT+  AEEV++AIS+L
Sbjct: 183 VYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNL 242

Query: 837 DGVDLNGRPIRVTVAESRPRRQF 905
           DG+DL+GR IRVTVAES+PRRQF
Sbjct: 243 DGIDLDGRQIRVTVAESKPRRQF 265


>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530826|gb|ESR42009.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 263

 Score =  319 bits (817), Expect = 2e-84
 Identities = 178/245 (72%), Positives = 196/245 (80%), Gaps = 12/245 (4%)
 Frame = +3

Query: 144 KALIF--SKPTNVSISSISP-----LKPFSSISAAFLPPSRREAVS-SRFVRNVAVSSEF 299
           K L F  SKPT+ S+ S S       KP S IS++F+   +    S SRFVRNVAVSSEF
Sbjct: 17  KTLAFYNSKPTSFSLLSSSSSHKLLAKPIS-ISSSFIHSFQPLPSSPSRFVRNVAVSSEF 75

Query: 300 DQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSR 479
           DQEED+  +E   NFSPDLKLFVGNLPF VDSAQLAGLFE AGNVEMVEVIYDK TGRSR
Sbjct: 76  DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 480 GFGFVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPP-KEDSPSRGPRG---GASFDA 647
           GFGFVTMS+ EEVEAAAQQFNGYELEGRPLRVN GPPPP +E+   RGPRG   GA    
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDDLALETLF EQGKV+EAKVVYDR+SG+SRGFGFVT+S AEEVD+AI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 828 SSLDG 842
            SL+G
Sbjct: 256 DSLNG 260



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 57/91 (62%)
 Frame = +3

Query: 630 GASFDASNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAE 809
           G++F    +++VGNL + VD   L  LF   G V   +V+YD+ +G+SRGFGFVT S  E
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 810 EVDSAISSLDGVDLNGRPIRVTVAESRPRRQ 902
           EV++A    +G +L GRP+RV      PRR+
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 42/105 (40%), Positives = 55/105 (52%)
 Frame = +3

Query: 234 PPSRREAVSSRFVRNVAVSSEFDQEEDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGL 413
           PP RRE  S R  R     +                 S   +++VGNL +GVD   L  L
Sbjct: 172 PPPRREEFSPRGPRGGGAGAPS---------------SGGNRVYVGNLSWGVDDLALETL 216

Query: 414 FEQAGNVEMVEVIYDKFTGRSRGFGFVTMSTAEEVEAAAQQFNGY 548
           F + G V   +V+YD+ +GRSRGFGFVT S+AEEV+ A    NG+
Sbjct: 217 FREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGF 261


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  318 bits (816), Expect = 3e-84
 Identities = 179/267 (67%), Positives = 204/267 (76%), Gaps = 13/267 (4%)
 Frame = +3

Query: 144 KALIFSKPTNVSISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSD 323
           + L+  KPT+ + S      P SS++ +   PS     SSRFVR V +  +FDQ EDV D
Sbjct: 16  QTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPS--SCFSSRFVRKVTLP-DFDQIEDVED 72

Query: 324 -EEG---ERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGF 491
            +EG   ERNFSPDLK+FVGNL F  DSA LA LFE+AGNVEMVEVIYDK TGRSRGFGF
Sbjct: 73  GDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132

Query: 492 VTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPS--------RGPRGGASFDA 647
           VTMS+ EEVEAA QQFNGYEL+GR LRVN GPPP K ++ S         G RGG SFD+
Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDS 192

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
           SNRVYVGNLAWGVD  ALETLF EQGKV++AKVVYDRDSG+SRGFGFVT+S AEEV++AI
Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 252

Query: 828 SSLDGVDLNGRPIRVTVAESR-PRRQF 905
            SLDGVDLNGR IRV+ AE+R PRRQF
Sbjct: 253 ESLDGVDLNGRAIRVSPAEARPPRRQF 279


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  315 bits (808), Expect = 2e-83
 Identities = 170/267 (63%), Positives = 205/267 (76%), Gaps = 18/267 (6%)
 Frame = +3

Query: 159 SKPTNVSISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSDEEG-- 332
           S+P +VS+ S S     +S S +F   ++  + +SRFVRNVA++SEF+ EED   +    
Sbjct: 23  SRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFVRNVAITSEFEVEEDGFADVAPP 82

Query: 333 -ERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMSTA 509
            E++FS DLKLFVGNLPF VDSAQLA LFE AGNVEMVEVIYDK TGRSRGFGFVTMS+ 
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142

Query: 510 EEVEAAAQQFNGYELEGRPLRVNYGPPPPK-EDSPSRGPR-------------GGASFDA 647
            EVEAAAQQFNGYEL+GRPLRVN GPPPPK ED  SRGPR             GG+   +
Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDD+ALE+LF EQGKV+EA+V+YDRDSG+S+GFGFVT+  ++EV +AI
Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262

Query: 828 SSLDGVDLNGRPIRVTVAESR-PRRQF 905
            SLDG DL+GR IRV+ AE+R PRRQ+
Sbjct: 263 KSLDGADLDGRQIRVSEAEARPPRRQY 289


>ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
           gi|241924453|gb|EER97597.1| hypothetical protein
           SORBIDRAFT_02g040260 [Sorghum bicolor]
          Length = 268

 Score =  314 bits (805), Expect = 5e-83
 Identities = 163/266 (61%), Positives = 200/266 (75%), Gaps = 13/266 (4%)
 Frame = +3

Query: 147 ALIFSKPTNVSISSISPLKPFSSISAAFLP---PSRREAVSSRFVRN---VAVSSEFDQE 308
           A +FS   +    ++S  KP +  ++AFLP   P R  +   R V     VAVSSE++ E
Sbjct: 3   AALFSTSLSPRFLALSSAKPAAPAASAFLPFRLPLRAVSAPGRRVFEPVAVAVSSEYETE 62

Query: 309 EDVSDEEGERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFG 488
               +EEG   FS DLKLFVGNLPF VDSAQLAGLFEQAG+VEMVEV+YD+ TGRSRGFG
Sbjct: 63  GAEQEEEGAEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFG 122

Query: 489 FVTMSTAEEVEAAAQQFNGYELEGRPLRVNYGPPPPKEDSPSRGPRGGAS-------FDA 647
           FVTMS+AEE  AA +QFNGY  +GRPLRVN GPPPP+++S  R PRGG          D+
Sbjct: 123 FVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGGSFVDS 182

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
           +N+VYVGNLAWGVD+  LE LF EQG+V++AKV+YDR+SG+SRGFGFVT+  A EV++AI
Sbjct: 183 ANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNNAI 242

Query: 828 SSLDGVDLNGRPIRVTVAESRPRRQF 905
           S+LDG+DL+GR IRVTVAES+PRRQF
Sbjct: 243 SNLDGIDLDGRQIRVTVAESKPRRQF 268


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  314 bits (804), Expect = 7e-83
 Identities = 169/267 (63%), Positives = 204/267 (76%), Gaps = 18/267 (6%)
 Frame = +3

Query: 159 SKPTNVSISSISPLKPFSSISAAFLPPSRREAVSSRFVRNVAVSSEFDQEEDVSDEEG-- 332
           S+P +VS+ S S     +S S +F   ++  + +SRF RNVA++SEF+ EED   +    
Sbjct: 23  SRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFADVAPP 82

Query: 333 -ERNFSPDLKLFVGNLPFGVDSAQLAGLFEQAGNVEMVEVIYDKFTGRSRGFGFVTMSTA 509
            E++FS DLKLFVGNLPF VDSAQLA LFE AGNVEMVEVIYDK TGRSRGFGFVTMS+ 
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142

Query: 510 EEVEAAAQQFNGYELEGRPLRVNYGPPPPK-EDSPSRGPR-------------GGASFDA 647
            EVEAAAQQFNGYEL+GRPLRVN GPPPPK ED  SRGPR             GG+   +
Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202

Query: 648 SNRVYVGNLAWGVDDLALETLFGEQGKVMEAKVVYDRDSGKSRGFGFVTFSCAEEVDSAI 827
            NRVYVGNL+WGVDD+ALE+LF EQGKV+EA+V+YDRDSG+S+GFGFVT+  ++EV +AI
Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262

Query: 828 SSLDGVDLNGRPIRVTVAESR-PRRQF 905
            SLDG DL+GR IRV+ AE+R PRRQ+
Sbjct: 263 KSLDGADLDGRQIRVSEAEARPPRRQY 289