BLASTX nr result
ID: Cocculus22_contig00001243
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00001243
(944 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,... 105 3e-20
ref|XP_007043581.1| Pentatricopeptide repeat-containing protein,... 90 1e-15
ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [S... 83 2e-13
ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group] g... 82 4e-13
gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japo... 82 4e-13
gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indi... 82 4e-13
ref|XP_004982702.1| PREDICTED: pentatricopeptide repeat-containi... 81 5e-13
ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-12
gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Grou... 79 2e-12
gb|ACG28606.1| tetratricopeptide-like helical [Zea mays] gi|4148... 78 4e-12
ref|NP_001142217.1| hypothetical protein [Zea mays] gi|194707648... 78 4e-12
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi... 78 6e-12
gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indi... 76 2e-11
ref|XP_006661923.1| PREDICTED: pentatricopeptide repeat-containi... 75 3e-11
ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [A... 75 5e-11
gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group] g... 74 6e-11
gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japo... 74 6e-11
ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group] g... 74 6e-11
gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group] 74 6e-11
gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indi... 74 8e-11
>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 105 bits (261), Expect = 3e-20
Identities = 48/92 (52%), Positives = 67/92 (72%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
EM ++ V R+GWKPN + +T+CLDY E Q DV+G + VK L+++ SLTR++YH L+R
Sbjct: 415 EMLKKAISVSRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLTRDIYHRLVR 474
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMILE 668
TY AA P + V+D+MK ++ADEETH ILE
Sbjct: 475 TYTAAGIPVTKVIDKMKMDNIAADEETHKILE 506
>ref|XP_007043581.1| Pentatricopeptide repeat-containing protein, putative, partial
[Theobroma cacao] gi|508707516|gb|EOX99412.1|
Pentatricopeptide repeat-containing protein, putative,
partial [Theobroma cacao]
Length = 111
Score = 89.7 bits (221), Expect = 1e-15
Identities = 45/95 (47%), Positives = 62/95 (65%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
EM +M VGRRGW+P MV +CLDY E Q D G + + LL+ SG LTR++YH LLR
Sbjct: 14 EMLKKAMSVGRRGWRPRSMVFAACLDYLEEQGDGRGMEEMICLLKNSGPLTRDMYHRLLR 73
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMILEKMS 659
+ + S+++D+MK G AD+ETH ILE ++
Sbjct: 74 CRI---QTVSEIVDQMKVEGFVADKETHDILESIT 105
>ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein
SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 82.8 bits (203), Expect = 2e-13
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+M+ +++ WKP+ V L++F Q+DV+ A + +L+ G LT+EVYH LL+
Sbjct: 410 DMTRKALESATPPWKPDLTNVLMSLEHFMNQKDVEAAEEIASMLQKLGPLTKEVYHCLLK 469
Query: 763 TYVAADRPASDVLDRMKSTGLSADEET 683
TYV A +P SD+L+RMK GL ADEET
Sbjct: 470 TYVRAGKPVSDLLERMKKDGLEADEET 496
>ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza
sativa Japonica Group] gi|31432901|gb|AAP54477.1|
pentatricopeptide, putative, expressed [Oryza sativa
Japonica Group] gi|113639594|dbj|BAF26899.1|
Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 81.6 bits (200), Expect = 4e-13
Identities = 40/91 (43%), Positives = 57/91 (62%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ WKP+ V ++YF Q++V+ A + LL+ LTR+VYH LL+
Sbjct: 418 DLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLK 477
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A PASD+LDRMK G+ ADEET IL
Sbjct: 478 TYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 81.6 bits (200), Expect = 4e-13
Identities = 40/91 (43%), Positives = 57/91 (62%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ WKP+ V ++YF Q++V+ A + LL+ LTR+VYH LL+
Sbjct: 380 DLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLK 439
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A PASD+LDRMK G+ ADEET IL
Sbjct: 440 TYVNAGEPASDLLDRMKKDGIEADEETDKIL 470
>gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 81.6 bits (200), Expect = 4e-13
Identities = 40/91 (43%), Positives = 57/91 (62%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ WKP+ V ++YF Q++V+ A + LL+ LTR+VYH LL+
Sbjct: 418 DLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLK 477
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A PASD+LDRMK G+ ADEET IL
Sbjct: 478 TYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>ref|XP_004982702.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Setaria italica]
Length = 495
Score = 81.3 bits (199), Expect = 5e-13
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = -2
Query: 904 WKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLRTYVAADRPASDVL 725
WKP+ V L++F Q+DV+ A + +L+ LTR+VYHSLL+TYV A +P SD+L
Sbjct: 413 WKPDLANVLMSLNHFMEQKDVEAAEEMASMLQKLVPLTRDVYHSLLKTYVLAGKPVSDLL 472
Query: 724 DRMKSTGLSADEETHMIL 671
+RMK GL ADEET IL
Sbjct: 473 ERMKKDGLEADEETDRIL 490
>ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 80.1 bits (196), Expect = 1e-12
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ GW+P+ V LD+F Q++V+ A + LL + LTR+VYHSLL+
Sbjct: 402 DLTRKALASATSGWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLVPLTRDVYHSLLK 461
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMILEKM 662
TYV A P SD+LDRM G AD+ET IL ++
Sbjct: 462 TYVHAGMPVSDLLDRMNEDGFEADQETDRILARL 495
>gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein
OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 79.3 bits (194), Expect = 2e-12
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ G W P+ V L+YF Q++V+ A + LL+ + TR++YH LL+
Sbjct: 450 DLTKKALASGSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLITPTRDIYHGLLK 509
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+LDRMK G+ ADEET IL
Sbjct: 510 TYVNAGKPVSDLLDRMKKDGMEADEETEKIL 540
>gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like
helical [Zea mays]
Length = 517
Score = 78.2 bits (191), Expect = 4e-12
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+M+ ++ W+P+ V L++F Q+DV A + V L+ LTR+VYH LL+
Sbjct: 407 DMTRKALDSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVPLTRDVYHCLLK 466
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L+RMK GL ADEET IL
Sbjct: 467 TYVRAGKPPSDLLERMKEDGLEADEETERIL 497
>ref|NP_001142217.1| hypothetical protein [Zea mays] gi|194707648|gb|ACF87908.1| unknown
[Zea mays] gi|414870857|tpg|DAA49414.1| TPA:
hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 78.2 bits (191), Expect = 4e-12
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+M+ ++ W+P+ V L++F Q+DV A + V L+ LTR+VYH LL+
Sbjct: 362 DMTRKALDSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVPLTRDVYHCLLK 421
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L+RMK GL ADEET IL
Sbjct: 422 TYVRAGKPPSDLLERMKEDGLEADEETERIL 452
>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 77.8 bits (190), Expect = 6e-12
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRM-VVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLL 767
EM ++ VGR+ WKP + ++ +CLDY E Q D + + V+L ++SG++ +E+Y+ LL
Sbjct: 403 EMLKKAILVGRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLL 462
Query: 766 RTYVAADRPASDVLDRMKSTGLSADEETHMIL 671
RT +A +P +L++MK G +ADEE IL
Sbjct: 463 RTSIAGGKPVISILEQMKMDGFAADEEVDKIL 494
>gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 76.3 bits (186), Expect = 2e-11
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + LL+ + TR++YH LL+
Sbjct: 384 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLITPTRDIYHGLLK 443
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+LDRMK G+ ADEET IL
Sbjct: 444 TYVNAGKPVSDLLDRMKKDGMEADEETEKIL 474
>ref|XP_006661923.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Oryza brachyantha]
Length = 521
Score = 75.5 bits (184), Expect = 3e-11
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + LL+ LTR+VYH LL+
Sbjct: 426 DLTKKALASASNEWIPDLTNVLMSLNYFMEQKNVEAAEEMASLLQRLLPLTRDVYHGLLK 485
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+LDRM+ G++ DEET IL
Sbjct: 486 TYVNAGKPVSDLLDRMRKDGINTDEETDKIL 516
>ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [Amborella trichopoda]
gi|548832390|gb|ERM95186.1| hypothetical protein
AMTR_s00009p00264540 [Amborella trichopoda]
Length = 503
Score = 74.7 bits (182), Expect = 5e-11
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = -2
Query: 928 SMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLRTYVAA 749
S+ GRR P+ V + L++F DV+G +F+ LL LTREVYH LLRTY++A
Sbjct: 409 SLHQGRRRL-PDSGNVAAGLEFFRQNSDVEGIEEFISLLRPVVPLTREVYHELLRTYISA 467
Query: 748 DRPASDVLDRMKSTGLSADEETHMILE 668
RP V++RMK + DEET +IL+
Sbjct: 468 GRPVETVIERMKGENIEPDEETEVILK 494
>gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 341
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + + LL+ + TR++YH LL+
Sbjct: 246 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 305
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L RMK G+ ADEET IL
Sbjct: 306 TYVNAGKPVSDLLHRMKKDGMEADEETEKIL 336
>gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + + LL+ + TR++YH LL+
Sbjct: 305 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 364
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L RMK G+ ADEET IL
Sbjct: 365 TYVNAGKPVSDLLHRMKKDGMEADEETEKIL 395
>ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial
[Oryza sativa Japonica Group]
Length = 451
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + + LL+ + TR++YH LL+
Sbjct: 356 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 415
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L RMK G+ ADEET IL
Sbjct: 416 TYVNAGKPVSDLLHRMKKDGMEADEETEKIL 446
>gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + + LL+ + TR++YH LL+
Sbjct: 277 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 336
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L RMK G+ ADEET IL
Sbjct: 337 TYVNAGKPVSDLLHRMKKDGMEADEETEKIL 367
>gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 73.9 bits (180), Expect = 8e-11
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 943 EMSMNSMQVGRRGWKPNRMVVTSCLDYFEMQRDVDGALDFVKLLETSGSLTREVYHSLLR 764
+++ ++ W P+ V L+YF Q++V+ A + + LL+ + TR++YH LL+
Sbjct: 274 DLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLK 333
Query: 763 TYVAADRPASDVLDRMKSTGLSADEETHMIL 671
TYV A +P SD+L RMK G+ ADEET IL
Sbjct: 334 TYVNAGKPVSDLLRRMKKDGMEADEETEKIL 364