BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00001196
         (589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300045.2| hypothetical protein POPTR_0001s35150g [Popu...    65   2e-08
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...    56   8e-06

>ref|XP_002300045.2| hypothetical protein POPTR_0001s35150g [Populus trichocarpa]
            gi|550348924|gb|EEE84850.2| hypothetical protein
            POPTR_0001s35150g [Populus trichocarpa]
          Length = 793

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
 Frame = -2

Query: 435  RRHSPSPRTNSSPTVQRSVKIGR-SPQPQPHRGSPPYHRDKGPLDGRTGSPSGRRKNVVS 259
            R  SPS     S   +  ++ GR SP  Q HR      R + P  G  GS     K ++ 
Sbjct: 676  RSRSPSAGGGGSSFHKAIMERGRASPPRQVHR-----ERSRSPYHGSGGS---FHKEMIE 727

Query: 258  NQ-------QQQRGKAPRDGGDSGRFFNGPSLPHRGEEDEEGLIPAEEDGAIPPEEEGM 103
                     QQ+RG++P  G D G  FN     + GEE+EEG+IPA+EDG IPP++ GM
Sbjct: 728  QSRPSSYHAQQERGRSPSSGHDRG--FNAGPRSYVGEEEEEGMIPADEDGMIPPDDNGM 784


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 781

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 29/140 (20%)
 Frame = -2

Query: 435  RRHSPSP-RTNSSPTVQRSVKIGRSPQPQPHRGSPP----YHRDKGPLDGRTGS---PSG 280
            R  S SP R N +P  +  V+       +  R S P      R + P +G   S   PS 
Sbjct: 633  RDRSRSPDRNNRAPPTRSPVRSFHQAMMEKGRASSPPQNQLERSRSPCNGGGSSFYRPST 692

Query: 279  RRKNVVSNQQQ----------------QRGKAPRDGGDSG-----RFFNGPSLPHRGEED 163
            R ++ V +  Q                 R  +P  GG  G     R +N     H GEE+
Sbjct: 693  RERSPVRSFHQAMVDKGPVSQPPRNKLDRSGSPYGGGGPGSGHVDRGYNDGPRSHFGEEE 752

Query: 162  EEGLIPAEEDGAIPPEEEGM 103
            EEG+IPA+EDG IPP++ GM
Sbjct: 753  EEGMIPADEDGIIPPDDGGM 772