BLASTX nr result
ID: Cocculus22_contig00001148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00001148
(2697 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364252.1| PREDICTED: uncharacterized mitochondrial pro... 207 2e-50
ref|YP_717161.1| hypothetical protein BrnapMp064 [Brassica napus... 184 2e-43
ref|YP_004927571.1| orf448 (mitochondrion) [Brassica carinata] g... 184 2e-43
ref|XP_006345348.1| PREDICTED: uncharacterized protein LOC102602... 183 3e-43
gb|AEX57677.1| hypothetical protein RasatMp046 (mitochondrion) [... 181 2e-42
ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odor... 179 6e-42
gb|AGC81676.1| hypothetical protein DCGMS_00160 (mitochondrion) ... 177 2e-41
emb|CAJ32467.1| RNA-dependent RNA polymerase [Ophiostoma mitovir... 176 5e-41
ref|NP_660176.1| RNA-dependent RNA polymerase [Ophiostoma mitovi... 160 2e-36
gb|AHF48630.1| RNA-dependent RNA polymerase [Sclerotinia sclerot... 157 2e-35
gb|AAO21337.1| RdRp-like protein [Sclerotinia homoeocarpa mitovi... 156 5e-35
emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovir... 152 1e-33
gb|ABQ65153.3| RNA-dependent RNA polymerase [Botrytis cinerea mi... 150 2e-33
ref|YP_002284334.1| RNA-dependent RNA polymerase [Botrytis ciner... 150 2e-33
ref|NP_085564.1| hypothetical protein ArthMp097 [Arabidopsis tha... 150 4e-33
gb|AGT55876.1| RNA-dependent RNA polymerase [Ophiostoma mitoviru... 144 2e-31
gb|AHE13867.1| Pol, partial [Sclerotinia sclerotiorum mitovirus 8] 144 3e-31
gb|AGC24232.1| RNA-dependent RNA polymerase [Sclerotinia sclerot... 143 4e-31
ref|NP_671802.2| mitovirus RNA-dependent RNA polymerase [Arabido... 143 4e-31
gb|ABK28172.1| unknown [Arabidopsis thaliana] 143 4e-31
>ref|XP_006364252.1| PREDICTED: uncharacterized mitochondrial protein AtMg01110-like
[Solanum tuberosum]
Length = 438
Score = 207 bits (528), Expect = 2e-50
Identities = 159/455 (34%), Positives = 232/455 (50%), Gaps = 20/455 (4%)
Frame = -2
Query: 1832 YAPSYRLKPLKLGFNFKPIFSSGP---NTYKRPERESKLVFSALDYRQWQRRDKTMTVYH 1662
Y P + PL+ G N+KP + S P N +R + V + + + + + H
Sbjct: 2 YLPHLQSIPLEKGMNWKPTWKSTPLLDNFVRRFQYSVDDVVDGAAAKYVKEHNIFVNLKH 61
Query: 1661 SLPIDATALLTLWKPEFLAE----IGSLWFGDRIVYP----DNGYDNPVVPLEDGKLGFG 1506
+ A + + K + + G LW R++YP + + N + L + ++G
Sbjct: 62 EI---AAFIFNVNKIHSIQDGFFSPGILW-SQRVLYPFYSNNTRFANESLDLFEKQVGPP 117
Query: 1505 WLINSLTLPAQRIWWDSMITRPENGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCME 1326
+ +SL Q + ++T GR + +E GK R+FAI N I Q LL P+H W M
Sbjct: 118 F--SSLLGAYQGV---PLVT----GRLAQAIEGGGKRRIFAICNYIKQRLLHPVHIWAMT 168
Query: 1325 VLRSLKTDGTFDQPAPL--YRLKGKRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQS 1152
VL SLKTDGTF+Q PL RLK + +SFDLK+ATD P+ + +L+ ++G LA S
Sbjct: 169 VLSSLKTDGTFNQERPLQYLRLKRPKSCYSFDLKSATDRWPLSVIYTLIEMIWGSTLASS 228
Query: 1151 WM--KIMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVY 978
+ + +T SP + K S+ F GQPLG+Y SW F+L+HH +VWLA + Y
Sbjct: 229 IVNSSLGLNTFLVSPPMVKKISEV---AFLTGQPLGYYGSWSLFSLSHHYIVWLATLKAY 285
Query: 977 P--GKKFWDYAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIV 804
P F DYA+LGDDI+I D+KVA Y R+ + V IS KS++S +G EFAKRF +
Sbjct: 286 PLRSTPFVDYALLGDDILITDKKVANQYSRLLDRLSVTISFAKSIVSENGTIEFAKRFWI 345
Query: 803 NAHRGWDDISPISLSCLQACSGFVSTFIFS---TVKTNCLNSFRLRNGGYRVFSRWRDGG 633
+ DISPISL L +C V S +++ + L RL GY+V SR
Sbjct: 346 RDMQ--KDISPISLKALTSCRTTVGLCQLSCRYSIEISTLQ--RLAGAGYKVRSR----- 396
Query: 632 KNLSSCFYSLSQRWKRHWLSLYTPSGLRPLPLAIW 528
+ S RW+R + P+ L LPL W
Sbjct: 397 -----LMSTQSPRWERLKAAACKPNRLHLLPLEFW 426
>ref|YP_717161.1| hypothetical protein BrnapMp064 [Brassica napus]
gi|353526385|ref|YP_004927457.1| orf448 (mitochondrion)
[Brassica oleracea] gi|353526703|ref|YP_004927873.1|
orf448 (mitochondrion) [Brassica rapa subsp. oleifera]
gi|353531385|ref|YP_004927776.1| orf448 (mitochondrion)
[Brassica juncea] gi|37591108|dbj|BAC98910.1|
hypothetical protein [Brassica napus]
gi|335354891|gb|AEH43447.1| orf448 [Brassica rapa subsp.
oleifera] gi|335354930|gb|AEH43485.1| orf448 [Brassica
oleracea] gi|335355118|gb|AEH43671.1| orf448 [Brassica
juncea] gi|339511319|emb|CBX48374.1| unnamed protein
product [Brassica napus]
Length = 448
Score = 184 bits (467), Expect = 2e-43
Identities = 139/360 (38%), Positives = 182/360 (50%), Gaps = 10/360 (2%)
Frame = -2
Query: 1436 NGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLKGK 1257
+GR + LE AGK RLF I N Q LL P+H W M VLR + DGTF Q P++RL +
Sbjct: 78 SGRLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLAKR 137
Query: 1256 RELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKAR 1083
R F SFDL AATD PV + L+A LFG +A + + A S + +
Sbjct: 138 RPRFIASFDLSAATDRWPVPVIYELMACLFGQTMAS--CIVNGALALNSCSLKSVTGRHD 195
Query: 1082 LYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYP--GKKFWDYAILGDDIVIADRKVA 909
F GQPLG+Y SW F L+HH +VWLAA YP + F DYA+LGDDIVIADR VA
Sbjct: 196 EVVFVAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVA 255
Query: 908 EVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPISLSCLQACSGFVS 729
+ Y+ + + V IS KS++S G EFAKRF V D+SP+S + V
Sbjct: 256 KEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDLSPVSAKAVLESYFLVG 313
Query: 728 T----FIFSTVKTNCLNSFRLRNGGYRVFSRWRDGGKNLSSCFYSLSQRWKR-HWLSLYT 564
T + + CL RL GYRV + +LS+R+ R LS
Sbjct: 314 TQQLAYKYKLSPKTCL---RLNKAGYRVLGQMDT---------KALSRRFSRIQALSSKL 361
Query: 563 PSGLRPLPLAIWWAFPDRGI-LTCYELGLIRHFIMEKLKPKDIDENSVSEVFMFWDDDPE 387
G LPL WW RG+ L+ Y G++ I + +K K + + MF +PE
Sbjct: 362 LVGPDRLPLE-WWI--GRGLPLSPYLRGVLIARIRDGMKLKQLTPPPLE---MFLCGEPE 415
>ref|YP_004927571.1| orf448 (mitochondrion) [Brassica carinata]
gi|335355032|gb|AEH43586.1| orf448 [Brassica carinata]
Length = 448
Score = 184 bits (466), Expect = 2e-43
Identities = 139/360 (38%), Positives = 182/360 (50%), Gaps = 10/360 (2%)
Frame = -2
Query: 1436 NGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLKGK 1257
+GR + LE AGK RLF I N Q LL P+H W M VLR + DGTF Q P++RL +
Sbjct: 78 SGRLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLAKR 137
Query: 1256 RELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKAR 1083
R F SFDL AATD PV + L+A LFG +A + + A S + +
Sbjct: 138 RPRFIASFDLSAATDRWPVPVIYELMACLFGQTMAS--CIVNGALALNSCSLKSVTGRHD 195
Query: 1082 LYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYP--GKKFWDYAILGDDIVIADRKVA 909
F GQPLG+Y SW F L+HH +VWLAA YP + F DYA+LGDDIVIADR VA
Sbjct: 196 EVVFIAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVA 255
Query: 908 EVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPISLSCLQACSGFVS 729
+ Y+ + + V IS KS++S G EFAKRF V D+SP+S + V
Sbjct: 256 KEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDLSPVSAKAVLESYFLVG 313
Query: 728 T----FIFSTVKTNCLNSFRLRNGGYRVFSRWRDGGKNLSSCFYSLSQRWKR-HWLSLYT 564
T + + CL RL GYRV + +LS+R+ R LS
Sbjct: 314 TQQLAYKYKLSPKTCL---RLNKAGYRVLGQMDT---------KALSRRFSRIQALSSKL 361
Query: 563 PSGLRPLPLAIWWAFPDRGI-LTCYELGLIRHFIMEKLKPKDIDENSVSEVFMFWDDDPE 387
G LPL WW RG+ L+ Y G++ I + +K K + + MF +PE
Sbjct: 362 LVGPDRLPLE-WWI--GRGLPLSPYLRGVLIARIRDGMKLKQLTPPPLE---MFLCGEPE 415
>ref|XP_006345348.1| PREDICTED: uncharacterized protein LOC102602246 [Solanum tuberosum]
Length = 533
Score = 183 bits (465), Expect = 3e-43
Identities = 136/380 (35%), Positives = 201/380 (52%), Gaps = 17/380 (4%)
Frame = -2
Query: 1832 YAPSYRLKPLKLGFNFKPIFSSGP---NTYKRPERESKLVFSALDYRQWQRRDKTMTVYH 1662
Y P + PL+ G N+KP + S P N ++ + V + + + + + H
Sbjct: 2 YLPHLQSIPLEKGMNWKPTWKSTPLLDNFVRQFQYSVDDVVDGAAAKYVKEHNIFVNLKH 61
Query: 1661 SLPIDATALLTLWKPEFLAE----IGSLWFGDRIVYP----DNGYDNPVVPLEDGKLGFG 1506
+ AT + ++ K + + G LW R++YP + + N + L + ++G
Sbjct: 62 EI---ATFIFSVNKIHSIQDGFFSPGILW-SQRVLYPFDSNNTRFANESLYLFEKQVGP- 116
Query: 1505 WLINSLTLPAQRIWWDSMITRPENGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCME 1326
L +SL Q + ++T GR + +E GK ++FAI N I Q LL +H W M
Sbjct: 117 -LFSSLLGAYQGV---PLVT----GRLSQAIEGGGKQKIFAICNYIKQRLLHLVHIWAMT 168
Query: 1325 VLRSLKTDGTFDQPAPLY--RLKGKRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQS 1152
VL SLK DG F+Q PL RLK + +SFDLK+ATD P+ + +L+ + G LA S
Sbjct: 169 VLSSLKNDGIFNQERPLQYLRLKRPKSCYSFDLKSATDRWPLSVIYTLIEMISGSTLASS 228
Query: 1151 WMK--IMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVY 978
+ + +T SP + K S+ F GQPLG+Y SW F+L+HH +VWLA + Y
Sbjct: 229 IVNSSLGLNTFLISPPIVKKISEVA---FLTGQPLGYYGSWSLFSLSHHYIVWLATLKAY 285
Query: 977 PGKK--FWDYAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIV 804
P + F DY +LGDDIVIAD+KVA Y R+ + V IS S++S +G EFAKRF +
Sbjct: 286 PLRSTPFVDYLLLGDDIVIADKKVANQYNRLLDRLSVTISFAISIVSENGKIEFAKRFWI 345
Query: 803 NAHRGWDDISPISLSCLQAC 744
+ DISPISL L +C
Sbjct: 346 RDMQ--KDISPISLKALTSC 363
>gb|AEX57677.1| hypothetical protein RasatMp046 (mitochondrion) [Raphanus sativus]
Length = 474
Score = 181 bits (458), Expect = 2e-42
Identities = 138/360 (38%), Positives = 181/360 (50%), Gaps = 10/360 (2%)
Frame = -2
Query: 1436 NGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLKGK 1257
+GR + LE AGK RLF I N Q LL +H W M VLR + DGTF Q P++RL +
Sbjct: 104 SGRLAQSLEGAGKRRLFVIGNWFKQRLLYSVHVWGMSVLRRIPQDGTFHQEGPIHRLAKR 163
Query: 1256 RELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKAR 1083
R F SFDL AATD PV + L+A LFG +A + + A S + +
Sbjct: 164 RPRFIASFDLSAATDRWPVPVIYELMACLFGQTMAS--CIVNGALALNSCSLKSVTGRHD 221
Query: 1082 LYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYP--GKKFWDYAILGDDIVIADRKVA 909
F GQPLG+Y SW F L+HH +VWLAA YP + F DYA+LGDDIVIADR VA
Sbjct: 222 EVVFIAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVA 281
Query: 908 EVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPISLSCLQACSGFVS 729
+ Y+ + + V IS KS++S G EFAKRF V D+SP+S + V
Sbjct: 282 KEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDLSPVSAKAVLESYFLVG 339
Query: 728 T----FIFSTVKTNCLNSFRLRNGGYRVFSRWRDGGKNLSSCFYSLSQRWKR-HWLSLYT 564
T + + CL RL GYRV + +LS+R+ R LS
Sbjct: 340 TQQLAYKYKLSPKTCL---RLNKAGYRVLGQMDT---------KALSRRFSRIQALSSKL 387
Query: 563 PSGLRPLPLAIWWAFPDRGI-LTCYELGLIRHFIMEKLKPKDIDENSVSEVFMFWDDDPE 387
G LPL WW RG+ L+ Y G++ I + +K K + + MF +PE
Sbjct: 388 LVGPDRLPLE-WWI--GRGLPLSPYLRGVLIARIRDGMKLKQLTPPPLE---MFLCGEPE 441
>ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odora virus]
gi|380355871|emb|CCG47524.1| RNA dependent RNA polymerase
[Clitocybe odora virus]
Length = 1136
Score = 179 bits (454), Expect = 6e-42
Identities = 161/532 (30%), Positives = 260/532 (48%), Gaps = 11/532 (2%)
Frame = -2
Query: 2375 FNYKLFSVVERLASKRWRGTLERSRCLIGLLNKAQLCIFGKLTKGHCLATLHMSRQIIRL 2196
F ++ FS+ L++K R S ++G++ + + GKLT T + Q R+
Sbjct: 50 FRFRSFSLGV-LSAKAIRNN---SLSMVGMVLRLIPTMQGKLTPAIAKDTKSILSQFSRI 105
Query: 2195 YRSSGPLFTSIYLKQCQQLLKWYVGGSSSLRPSMKVFVSLTRSGIPRILPPLYKKEIKRG 2016
+ G + YLK C L + + G S +V S T SGIPRILP ++ I++G
Sbjct: 106 AKCQGIVGLVKYLKACSVLTQQSISGFKVDNFSPRV--SRTNSGIPRILPVHCRRMIRQG 163
Query: 2015 NLLVIRMALTMFAVFRLIKVWAPGARRVNPQTVHHRSFTLSDSAYSVCETLVQSGFS--- 1845
+L+ +R++LT+F++FR+++ PG +++ T + YS E +++
Sbjct: 164 HLVYMRLSLTIFSLFRVMRY--PGKMKISTIT----------APYSGTEQMIRIVTKDIP 211
Query: 1844 -MVAAYAPSYRLKPLKLGFNFKPIFSSGPNTYK--RPERESKLVFSALDYRQWQRRDKTM 1674
V + PS + L F++ I S P + + L+ +AL + Q
Sbjct: 212 RFVRLFCPSAG-RSLIGRFSYVVINKSSPMALRGIASTHPTSLIRAALAFTPKQ------ 264
Query: 1673 TVYHSLPIDATALLTLWKPEFLAEIGSLWFGDRIVYPDNGYDNPVVPLEDGKLGFGWLIN 1494
SL + A A PE ++V G P PL G + F I
Sbjct: 265 --VESLELLARAS----HPE-----------SQVVITPEGIKEPPTPLP-GVMVFINRIR 306
Query: 1493 SLTLPAQRIWWDSMITRPENGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRS 1314
+P+ ++ + T G+ G K E AGKVR+FA+ +P Q +LRP H ++LR
Sbjct: 307 KSVIPS--LFGLGINTPSHTGKLGLKEEAAGKVRVFAMVDPWSQMILRPFHLGLFKILRR 364
Query: 1313 LKTDGTFDQPAPLYRLKGKRELFSFDLKAATDLLPVQLTASLLASLF--GDDLAQSWMKI 1140
++ DGTF+Q PL R G + L+S DL +ATD LP+++ L+ LF + A++W +
Sbjct: 365 IRMDGTFNQLKPLERAWGFKSLYSMDLSSATDRLPMRIQVPLIQQLFKLTNAEAEAWRSL 424
Query: 1139 MSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKK-- 966
+ + P ++ GQP+G SSW +THH++V +AA+ KK
Sbjct: 425 LVDRPYYCPPLNTS------VMYSVGQPMGALSSWAMLAMTHHLIVQVAAWRSGFDKKKL 478
Query: 965 FWDYAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDG-ACEFAKR 813
F YA+LGDDIVI D+KVA+ Y R+ + V +L KS++S+ G EFAK+
Sbjct: 479 FRAYAVLGDDIVIFDKKVAKYYHRVLTGLGVECNLAKSIMSHRGIGLEFAKK 530
>gb|AGC81676.1| hypothetical protein DCGMS_00160 (mitochondrion) [Raphanus sativus]
Length = 448
Score = 177 bits (450), Expect = 2e-41
Identities = 137/360 (38%), Positives = 180/360 (50%), Gaps = 10/360 (2%)
Frame = -2
Query: 1436 NGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLKGK 1257
+GR + LE A K RLF I N Q LL +H W M VLR + DGTF Q P++RL +
Sbjct: 78 SGRLAQSLEGARKRRLFVIGNWFKQRLLYSVHVWGMSVLRRIPQDGTFHQEGPIHRLAKR 137
Query: 1256 RELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKAR 1083
R F SFDL AATD PV + L+A LFG +A + + A S + +
Sbjct: 138 RPRFIASFDLSAATDRWPVPVIYELMACLFGQTMASCIVN--GALALNSCSLKSVTGRHD 195
Query: 1082 LYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPG--KKFWDYAILGDDIVIADRKVA 909
F GQPLG+Y SW F L+HH +VWLAA YP + F DYA+LGDDIVIADR VA
Sbjct: 196 EVVFIAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVA 255
Query: 908 EVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPISLSCLQACSGFVS 729
+ Y+ + + V IS KS++S G EFAKRF V D+SP+S + V
Sbjct: 256 KEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDLSPVSAKAVLESYFLVG 313
Query: 728 T----FIFSTVKTNCLNSFRLRNGGYRVFSRWRDGGKNLSSCFYSLSQRWKR-HWLSLYT 564
T + + CL RL GYRV + +LS+R+ R LS
Sbjct: 314 TQQLAYKYKLSPKTCL---RLNKAGYRVLGQMDT---------KALSRRFSRIQALSSKL 361
Query: 563 PSGLRPLPLAIWWAFPDRGI-LTCYELGLIRHFIMEKLKPKDIDENSVSEVFMFWDDDPE 387
G LPL WW RG+ L+ Y G++ I + +K K + + MF +PE
Sbjct: 362 LVGPDRLPLE-WWI--GRGLPLSPYLRGVLIARIRDGMKLKQLTPPPLE---MFLCGEPE 415
>emb|CAJ32467.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 1b]
Length = 776
Score = 176 bits (446), Expect = 5e-41
Identities = 148/473 (31%), Positives = 220/473 (46%), Gaps = 9/473 (1%)
Frame = -2
Query: 2198 LYRSSGPLFTSIYLKQCQQLLKWYVGGSSSLRP--SMKVFVSLTRSGIPRILPPLYKKEI 2025
L SG +T Y+K C + YV + S + VSLT SGIPRI+P + ++
Sbjct: 50 LQEKSGLAYTCQYMKACAIYVMKYVAKDPNKLAINSFSILVSLTDSGIPRIIPSYIRYQL 109
Query: 2024 KRGNLLVIRMALTMFAVFRLIKVWAPGARRVNPQTVHHRSFTLSDSAYSVCETLVQSGFS 1845
+RGN I+ LT+F ++R+++ PG +++ T SFTL ++S S
Sbjct: 110 RRGNKNSIKALLTVFNLYRVLEY--PGVLKLSTIT-DSSSFTLPSDFSGWLAEFMRSQ-S 165
Query: 1844 MVAAYAPSYRLKPLKLGFNFKPIFSSGPNTYKRPERESKLVFSALDYRQWQRRDKTMTVY 1665
M + S L P I+SSGP + K + + + RR K
Sbjct: 166 MTVPFKISDLLNPFL-------IYSSGPCSPKGMNNTAGWILAF-------RRLK----- 206
Query: 1664 HSLPIDATALLTLWKPEFLAEIGSLWFGDRIVYPDNGYDNPVVPLEDGKLGFGWLINSLT 1485
+L +D LTL P E W + Y N ++P D + G
Sbjct: 207 -ALFLDKEFFLTLLDP--YKERRQWWESSPFIK----YFNAILPDFDDNVSLG------- 252
Query: 1484 LPAQRIWWDSMITRPENGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLK- 1308
+ K EP GKVR+FA+A+ I Q +L PLH + +L+ +
Sbjct: 253 ------------------KLAFKEEP-GKVRVFAMADCITQWVLHPLHQYLFSILKQISI 293
Query: 1307 TDGTFDQPAPLYRLK-----GKRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMK 1143
D TFDQ + L GKR +FS DL AATD LP+ + A +L + L W
Sbjct: 294 VDATFDQEEGVKTLSAKIKAGKRVVFSLDLSAATDRLPLTIQAQILNHIV-PKLGDHWAN 352
Query: 1142 IMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKF 963
++ + + P+ R+ GQP+G YSSW LTHH +V A++VY F
Sbjct: 353 LLVNRDYSVPNHTTLPVNPGTVRYGAGQPMGAYSSWAMLALTHHFIVQYCAFKVYHTNSF 412
Query: 962 W-DYAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFI 807
+ DY ILGDD+++ D KVA+ Y ++ ++ V ++L KSLIS G EFAK+F+
Sbjct: 413 FKDYLILGDDLLLLDAKVAKQYLQVMNQLDVGVNLAKSLISVRGYGEFAKQFL 465
>ref|NP_660176.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 3a]
gi|3650410|emb|CAA06228.1| RNA-dependent RNA polymerase
[Ophiostoma mitovirus 3a]
Length = 718
Score = 160 bits (406), Expect = 2e-36
Identities = 146/495 (29%), Positives = 233/495 (47%), Gaps = 27/495 (5%)
Frame = -2
Query: 2210 QIIRLYRSSGPLFTSIYLKQCQQLLKWYVGGSSSLRPSMKVFVSLTR-----SGIPRILP 2046
+I L++++G FT YLK+C ++++ +V G VFV+ G+P I+P
Sbjct: 54 RIAILWKANGVSFTVQYLKECTRIVQHFVSGHP-------VFVTDVMPIGLAGGLPTIIP 106
Query: 2045 PLYKKEIKRGNLLVIRMALTMFAVFRLIKVWAPGARRVNPQTVHHRSFTLSDSAYSVCET 1866
+ ++ + IR L+ AV+R++K+ P + S T D + +T
Sbjct: 107 GTLRTLLRSKDSSTIRGVLSTLAVYRIMKM---------PCVLKLESIT--DPFKGISDT 155
Query: 1865 LVQS----GFSMVAAYAPSYRLKPL-KLGFNFKPIFSSGPNTYKRPERESKLVFSALDYR 1701
L +S G + + P R K L L + S+GPN
Sbjct: 156 LPKSEIINGLASLGFEIPKGRSKHLLTLSNPIIYLLSAGPN------------------- 196
Query: 1700 QWQRRDKTMTVYHSLPIDATALLTLWKPEFLAEIGSLWFGDRIVYPDNGYDNPVVPLEDG 1521
HS+ +++ +WK + + L+ P + G
Sbjct: 197 ------------HSI-----SMMGIWKDIYAWYVSPLF--------------PTLLSFIG 225
Query: 1520 KLGFGWLINSLTLPAQRIWWDSMITRP-------ENGRFGRKLEPAGKVRLFAIANPILQ 1362
++ G ++ L L A+ +W++ +P + G+ K E AGK R+FA+A+ I Q
Sbjct: 226 RMNRGNVLIDL-LRAEVSYWEATGVKPSVSPLDLKLGKLAIKEEAAGKARVFAMADSITQ 284
Query: 1361 TLLRPLHDWCMEVLRSLKTDGTFDQPAPLYR--------LKGKRELFSFDLKAATDLLPV 1206
+++ PL+ W L+ L DGTF+Q APL R L E +S+DL +ATD LP+
Sbjct: 285 SVMAPLNSWVFSKLKDLPMDGTFNQQAPLNRLVQLYQDGLLHDVEFYSYDLSSATDRLPM 344
Query: 1205 QLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAF 1026
+++ LFG A+ W +T D K+ YR++ GQP+G SSW
Sbjct: 345 AFQKQIISVLFGSKFAKDW-----ATLLVGRDWYLKDIP---YRYSVGQPMGALSSWAML 396
Query: 1025 TLTHHVLVWLAAYEVYPGK-KFWDYAILGDDIVIADRKVAEVYQRIAGEVM-VVISLDKS 852
L+HHV+V +AA V GK F +YA+LGDDIVIAD+ VA Y I +++ V I+L KS
Sbjct: 397 ALSHHVIVQIAAMRV--GKLPFTNYALLGDDIVIADKAVATSYHMIMTQILGVEINLSKS 454
Query: 851 LISYDGACEFAKRFI 807
L+S + + EFAKR +
Sbjct: 455 LVS-NNSFEFAKRLV 468
>gb|AHF48630.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 14]
Length = 715
Score = 157 bits (397), Expect = 2e-35
Identities = 151/479 (31%), Positives = 232/479 (48%), Gaps = 15/479 (3%)
Frame = -2
Query: 2198 LYRSSGPLFTSIYLKQCQQLLKWYVGGSSSLRPSMKVFVSLTRSGIPRILPPLYKKEIKR 2019
L +G FT +YLK+C ++++ +V G+ L + ++ +S+ R G+P I+P + + +
Sbjct: 61 LLTHNGRKFTVLYLKECYRIVQHFVSGNPVLVTN-ELPLSIVR-GLPSIIPGVLRLRMHD 118
Query: 2018 GNLLVIRMALTMFAVFRLIKVWAPGARRVNPQTVHHRSFTLSDSAYSVCETLVQSGFSMV 1839
G+ VIR LT +VFR+IK PG + + FT S + E L ++
Sbjct: 119 GDPGVIRGVLTCLSVFRVIKF--PGDVKFDTIV---GPFTGLSSTLPIYELL-----TIK 168
Query: 1838 AAYAPSYRLKPLKLGFNFKPIFSSGPNTYKRPERESKLVFSALDYRQWQRRDKTMTVYHS 1659
++ P L+P++ F+ S+GPN + + LD + W R
Sbjct: 169 SSLPPLGELRPIRWLFSR----SAGPNC------KVAGLGIWLDIKAWSSRP-------- 210
Query: 1658 LPIDATALLTLWKPEFLAEIGSLWFGDRIVYPDNGYDNPVVPLEDGKLGFGWLINSLT-L 1482
+ ALL K ++P ED +LG ++ L L
Sbjct: 211 ---NFGALLDFIK----------------LFPGG---------EDFRLGLLSEVSVLRDL 242
Query: 1481 PAQRIWWDSMITRPENGRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTD 1302
P++ + GR K E AGKVR+FAI + + Q+++ PL + LR + D
Sbjct: 243 PSKVL---------HLGRLSFKEEAAGKVRVFAITDAVTQSVMAPLSXAIFDCLRRVPQD 293
Query: 1301 GTFDQPAPLYRLK-----GKRE---LFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWM 1146
GTF+Q APL RL+ GK E +S+DL AATD LPV L +L+ G+ W
Sbjct: 294 GTFNQSAPLDRLRQLKREGKLEGQKFYSYDLSAATDRLPVDLQVQILSIYLGEQFGTLWR 353
Query: 1145 KIM-----SSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEV 981
+M S+ P A+E + +R+ GQP+G SSW LTHH +V LAA V
Sbjct: 354 SVMTDRDWSAKVVTVPGLPAEEEQ---FRYAVGQPMGALSSWGMLALTHHYVVRLAARRV 410
Query: 980 YPGKKFWDYAILGDDIVIADRKVAEVYQRIAGEVM-VVISLDKSLISYDGACEFAKRFI 807
F DYA+LGDD+VIA+ VA Y I +++ V I+L K+L+S + + EFAKR +
Sbjct: 411 -SLHDFGDYAVLGDDVVIANDLVARSYHSIMVDILGVKINLSKTLVS-EHSFEFAKRLV 467
>gb|AAO21337.1| RdRp-like protein [Sclerotinia homoeocarpa mitovirus]
Length = 720
Score = 156 bits (394), Expect = 5e-35
Identities = 145/495 (29%), Positives = 230/495 (46%), Gaps = 27/495 (5%)
Frame = -2
Query: 2210 QIIRLYRSSGPLFTSIYLKQCQQLLKWYVGGSSSLRPSMKVFVSLTR-----SGIPRILP 2046
+I L++++G FT YLK+C ++++ +V G VFV+ G+P I+P
Sbjct: 55 RIAVLWKANGVSFTVQYLKECTRIVQHFVSGHP-------VFVTDVMPIGLAGGLPTIIP 107
Query: 2045 PLYKKEIKRGNLLVIRMALTMFAVFRLIKVWAPGARRVNPQTVHHRSFTLSDSAYSVCET 1866
+ ++ + IR L+ AV+R++K+ P + S T D + +T
Sbjct: 108 GTLRTLLRSKDPSTIRGVLSTLAVYRIMKM---------PCKLKLESIT--DPFKGISDT 156
Query: 1865 L----VQSGFSMVAAYAPSYRLKP-LKLGFNFKPIFSSGPNTYKRPERESKLVFSALDYR 1701
L V +G + + P + K L L + S+GPN
Sbjct: 157 LPKHEVINGLAALGLETPKGKSKHRLTLTNPIIYLLSAGPN------------------- 197
Query: 1700 QWQRRDKTMTVYHSLPIDATALLTLWKPEFLAEIGSLWFGDRIVYPDNGYDNPVVPLEDG 1521
HS+ +++ +WK + I L+ P + G
Sbjct: 198 ------------HSI-----SMMGIWKDIYAWYISPLF--------------PTLLSFIG 226
Query: 1520 KLGFGWLINSLTLPAQRIWWDSMITRP-------ENGRFGRKLEPAGKVRLFAIANPILQ 1362
++ G ++ L L ++ W++ +P + G+ K E AGK R+FA+A+ I Q
Sbjct: 227 RMNRGNVLIDL-LRSEVSHWEATGVKPSVSPLELKLGKLAIKEEAAGKARVFAMADSITQ 285
Query: 1361 TLLRPLHDWCMEVLRSLKTDGTFDQPAPLYR--------LKGKRELFSFDLKAATDLLPV 1206
+++ PL+ W L+ L DGTF+Q APL R L E +S+DL +ATD LP+
Sbjct: 286 SVMAPLNSWVFSKLKGLPMDGTFNQQAPLNRLVQLYKEGLLHDVEFYSYDLSSATDRLPM 345
Query: 1205 QLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAF 1026
+++ LFG D A W +T D K+ YR++ GQP+G SSW
Sbjct: 346 AFQKQIISVLFGSDFADDW-----ATLLVGRDWYLKDIP---YRYSVGQPMGALSSWAML 397
Query: 1025 TLTHHVLVWLAAYEVYPGK-KFWDYAILGDDIVIADRKVAEVYQRIAGEVM-VVISLDKS 852
L+HHV+V +AA V GK F +YA+LGDDIVIAD+ VA Y I +++ V I+L KS
Sbjct: 398 ALSHHVIVQIAAMRV--GKLSFTNYALLGDDIVIADKAVATSYHMIMTQILGVEINLSKS 455
Query: 851 LISYDGACEFAKRFI 807
L+S + E AKR +
Sbjct: 456 LVS-SNSFELAKRLV 469
>emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 3b]
Length = 738
Score = 152 bits (383), Expect = 1e-33
Identities = 95/225 (42%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLK--G 1260
G+ K E AGKVR+FA+ + Q++L PLH ++R L TDGTFDQ PL RL
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRLHELS 343
Query: 1259 KRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKARL 1080
++ FSFDL AATD LP+ L +L L A++W + P +L +
Sbjct: 344 TQDRFSFDLSAATDRLPLTLQKDILTLLVSPSFAEAW----GTALVGRPYKLKFGTTEDE 399
Query: 1079 YRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFWDYAILGDDIVIADRKVAEVY 900
++ GQP+G SSW LTHH +V +AA F DYA+LGDDI IA++ VA+ Y
Sbjct: 400 LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYALLGDDICIANKAVADNY 459
Query: 899 QRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPIS 765
I ++ V I+L KSLIS G EFAKR+ V G D+SP S
Sbjct: 460 LLIMHDLGVEINLSKSLISSTGVVEFAKRWRV----GQTDVSPAS 500
>gb|ABQ65153.3| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
Length = 738
Score = 150 bits (380), Expect = 2e-33
Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLK--G 1260
G+ K E AGKVR+FA+ + Q++L PLH ++R L TDGTFDQ PL RL
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRLHELS 343
Query: 1259 KRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKARL 1080
++ FSFDL AATD LP+ L +L L A++W + ++ ++
Sbjct: 344 TQDRFSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKWKFGTTEDE---- 399
Query: 1079 YRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFWDYAILGDDIVIADRKVAEVY 900
++ GQP+G SSW LTHH +V +AA F DYA+LGDDI IA++ VA+ Y
Sbjct: 400 LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYALLGDDICIANKAVADNY 459
Query: 899 QRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPIS 765
I ++ V I+L KSLIS G EFAKR+ V G D+SP S
Sbjct: 460 LLIMRDLGVEINLSKSLISSTGVVEFAKRWRV----GQTDVSPAS 500
>ref|YP_002284334.1| RNA-dependent RNA polymerase [Botrytis cinerea debilitation-related
virus]
Length = 529
Score = 150 bits (380), Expect = 2e-33
Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLK--G 1260
G+ K E AGKVR+FA+ + Q++L PLH ++R L TDGTFDQ PL RL
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRLHELS 343
Query: 1259 KRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKESKARL 1080
++ FSFDL AATD LP+ L +L L A++W + ++ ++
Sbjct: 344 TQDRFSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKWKFGTTEDE---- 399
Query: 1079 YRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFWDYAILGDDIVIADRKVAEVY 900
++ GQP+G SSW LTHH +V +AA F DYA+LGDDI IA++ VA+ Y
Sbjct: 400 LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYALLGDDICIANKAVADNY 459
Query: 899 QRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPIS 765
I ++ V I+L KSLIS G EFAKR+ V G D+SP S
Sbjct: 460 LLIMRDLGVEINLSKSLISSTGVVEFAKRWRV----GQTDVSPAS 500
>ref|NP_085564.1| hypothetical protein ArthMp097 [Arabidopsis thaliana]
gi|45477062|sp|P92543.1|M1110_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg01110;
AltName: Full=ORF251 gi|1785766|emb|CAA69796.1| unnamed
protein product [Arabidopsis thaliana]
Length = 251
Score = 150 bits (378), Expect = 4e-33
Identities = 97/236 (41%), Positives = 125/236 (52%), Gaps = 8/236 (3%)
Frame = -2
Query: 1331 MEVLRSLKTDGTFDQPAPLYRLKGKRELF--SFDLKAATDLLPVQLTASLLASLFGDDLA 1158
M VLR + DGTF Q P++RL +R F SFDL AATD PV + L+A LFG +A
Sbjct: 1 MSVLRRIPQDGTFHQEGPIHRLAKRRPRFIASFDLSAATDRWPVPVIYELMACLFGQTMA 60
Query: 1157 QSWMKIMSSTAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVY 978
+ + A S + + F GQPLG+Y SW F L+HH +VWLAA Y
Sbjct: 61 SCIVN--GALALNSCSLKSVTGRHDEVVFVAGQPLGYYGSWALFALSHHAIVWLAALRAY 118
Query: 977 PG--KKFWDYAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIV 804
P + F DYA+LGDDIVIADR VA+ Y+ + + V IS KS++S G EFAKRF V
Sbjct: 119 PHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWV 178
Query: 803 NAHRGWDDISPISLSCLQACSGFVST----FIFSTVKTNCLNSFRLRNGGYRVFSR 648
D+SP+S + V T + + CL RL GYRV +
Sbjct: 179 KIMS--KDLSPVSAKAVLESYFLVGTQQLAYKYKLSPKTCL---RLNKAGYRVLGQ 229
>gb|AGT55876.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 1c]
Length = 788
Score = 144 bits (363), Expect = 2e-31
Identities = 92/264 (34%), Positives = 141/264 (53%), Gaps = 7/264 (2%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLK-TDGTFDQPAPLYRLK-- 1263
G+ K EP GKVR+FA+A+ I Q +L PLH + +L+ + D TFDQ + L
Sbjct: 263 GKLAFKEEP-GKVRVFAMADCITQWVLHPLHQYLFSILKQISIVDATFDQEEGVRTLSQK 321
Query: 1262 ---GKRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRLAKES 1092
GK+ +FS DL AATD LP+ + A +L + L W ++ + + P+ +
Sbjct: 322 IKSGKKIVFSLDLSAATDRLPLTIQAQILNHIV-PKLGDHWANLLVNRDYSVPNHITLPV 380
Query: 1091 KARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFW-DYAILGDDIVIADRK 915
R+ GQP+G YSSW LTHH +V A++VY F+ DY ILGDD+++ D +
Sbjct: 381 NPGTVRYGAGQPMGAYSSWAMLALTHHFIVQYCAFKVYHSNSFFKDYLILGDDLLLLDAR 440
Query: 914 VAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDISPISLSCLQACSGF 735
VA+ Y ++ ++ V ++L KSLIS G EFAK+F+ + +SL +
Sbjct: 441 VAKQYLKVMSQLDVGVNLAKSLISVRGYGEFAKQFLSPE----GPLQGVSLKEFSSLKDG 496
Query: 734 VSTFIFSTVKTNCLNSFRLRNGGY 663
+S + +VK + S LR G+
Sbjct: 497 MSNILSLSVKMSLKPSLLLRLFGF 520
>gb|AHE13867.1| Pol, partial [Sclerotinia sclerotiorum mitovirus 8]
Length = 548
Score = 144 bits (362), Expect = 3e-31
Identities = 94/223 (42%), Positives = 128/223 (57%), Gaps = 14/223 (6%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRLK--- 1263
GR K E AGKVR+FAI + + Q+++ PL + LR + DGTFDQ APL RL+
Sbjct: 135 GRLSFKEEAAGKVRIFAITDAVTQSVMAPLSAAIFDCLRRVPQDGTFDQSAPLDRLRELK 194
Query: 1262 --GKRE---LFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIM-----SSTAFRSP 1113
GK E +S+DL AATD LPV L +L+ FG+ W +M S+ P
Sbjct: 195 RDGKLEGQKFYSYDLSAATDRLPVDLQVQILSIYFGEQFGTLWRSVMTDRDWSAKVVTVP 254
Query: 1112 DRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFWDYAILGDDI 933
A+E + +R+ GQP+G SSW LTHH +V LAA V F DYA+LGDD+
Sbjct: 255 GLPAEEEQ---FRYAVGQPMGALSSWGMLALTHHYIVRLAARRV-SLHDFSDYAVLGDDV 310
Query: 932 VIADRKVAEVYQRIAGEVM-VVISLDKSLISYDGACEFAKRFI 807
VIA+ VA Y I +++ V I+L K+L+S + + EFAKR +
Sbjct: 311 VIANDLVARSYHSIMVDILGVKINLSKTLVS-EHSFEFAKRLV 352
>gb|AGC24232.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 3]
Length = 712
Score = 143 bits (361), Expect = 4e-31
Identities = 94/221 (42%), Positives = 129/221 (58%), Gaps = 12/221 (5%)
Frame = -2
Query: 1433 GRFGRKLEPAGKVRLFAIANPILQTLLRPLHDWCMEVLRSLKTDGTFDQPAPLYRL---- 1266
G+ K E AGK R+FAI + I Q+++ P+ D ++LR + DGTF+Q APL RL
Sbjct: 254 GKLAIKEEAAGKARVFAITDSITQSVMGPISDAIFKMLRQIPMDGTFNQSAPLDRLVQLS 313
Query: 1265 ------KGKRELFSFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSSTAFRSPDRL 1104
+ R +S+DL AATD LP+ L +L+ G+ A W +M+ + L
Sbjct: 314 KDGAIPEKDRVFYSYDLSAATDRLPINLQKDILSIYCGESFALKWSILMTDRDW----YL 369
Query: 1103 AKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPGKKFWD-YAILGDDIVI 927
KE R R++ GQP+G SSW LTHH +V LAA V GK +D YA+LGDDIVI
Sbjct: 370 TKEK--RNLRYSVGQPMGALSSWAMLALTHHFIVGLAANRV--GKLGFDHYALLGDDIVI 425
Query: 926 ADRKVAEVYQRIAGEVM-VVISLDKSLISYDGACEFAKRFI 807
AD+ VA+ Y I E++ V I+L KSL+S + EFAKR +
Sbjct: 426 ADKSVADSYYMIMTEILGVQINLSKSLVS-TNSFEFAKRLV 465
>ref|NP_671802.2| mitovirus RNA-dependent RNA polymerase [Arabidopsis thaliana]
gi|91805410|gb|ABE65434.1| hypothetical protein At2g07749
[Arabidopsis thaliana] gi|330250967|gb|AEC06061.1|
mitovirus RNA-dependent RNA polymerase [Arabidopsis
thaliana]
Length = 246
Score = 143 bits (361), Expect = 4e-31
Identities = 93/227 (40%), Positives = 120/227 (52%), Gaps = 8/227 (3%)
Frame = -2
Query: 1304 DGTFDQPAPLYRLKGKRELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSS 1131
DGTF Q P++RL +R F SFDL AATD PV + L+A LFG +A + +
Sbjct: 5 DGTFHQEGPIHRLAKRRPRFIASFDLSAATDRWPVPVIYELMACLFGQTMASCIVN--GA 62
Query: 1130 TAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPG--KKFWD 957
A S + + F GQPLG+Y SW F L+HH +VWLAA YP + F D
Sbjct: 63 LALNSCSLKSVTGRHDEVVFVAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLD 122
Query: 956 YAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDI 777
YA+LGDDIVIADR VA+ Y+ + + V IS KS++S G EFAKRF V D+
Sbjct: 123 YALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDL 180
Query: 776 SPISLSCLQACSGFVST----FIFSTVKTNCLNSFRLRNGGYRVFSR 648
SP+S + V T + + CL RL GYRV +
Sbjct: 181 SPVSAKAVLESYFLVGTQQLAYKYKLSPKTCL---RLNKAGYRVLGQ 224
>gb|ABK28172.1| unknown [Arabidopsis thaliana]
Length = 247
Score = 143 bits (361), Expect = 4e-31
Identities = 93/227 (40%), Positives = 120/227 (52%), Gaps = 8/227 (3%)
Frame = -2
Query: 1304 DGTFDQPAPLYRLKGKRELF--SFDLKAATDLLPVQLTASLLASLFGDDLAQSWMKIMSS 1131
DGTF Q P++RL +R F SFDL AATD PV + L+A LFG +A + +
Sbjct: 5 DGTFHQEGPIHRLAKRRPRFIASFDLSAATDRWPVPVIYELMACLFGQTMASCIVN--GA 62
Query: 1130 TAFRSPDRLAKESKARLYRFTRGQPLGFYSSWPAFTLTHHVLVWLAAYEVYPG--KKFWD 957
A S + + F GQPLG+Y SW F L+HH +VWLAA YP + F D
Sbjct: 63 LALNSCSLKSVTGRHDEVVFVAGQPLGYYGSWALFALSHHAIVWLAALRAYPHQTRPFLD 122
Query: 956 YAILGDDIVIADRKVAEVYQRIAGEVMVVISLDKSLISYDGACEFAKRFIVNAHRGWDDI 777
YA+LGDDIVIADR VA+ Y+ + + V IS KS++S G EFAKRF V D+
Sbjct: 123 YALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKRFWVKIMS--KDL 180
Query: 776 SPISLSCLQACSGFVST----FIFSTVKTNCLNSFRLRNGGYRVFSR 648
SP+S + V T + + CL RL GYRV +
Sbjct: 181 SPVSAKAVLESYFLVGTQQLAYKYKLSPKTCL---RLNKAGYRVLGQ 224