BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000738
         (373 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   173   3e-41
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   173   3e-41
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         171   7e-41
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         171   7e-41
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   171   7e-41
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   164   9e-39
ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer ar...   162   3e-38
ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer ar...   162   3e-38
ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer ar...   162   3e-38
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   162   6e-38
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   158   8e-37
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...   157   1e-36
ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer ar...   157   1e-36
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   150   1e-34
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par...   150   2e-34
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar...   148   9e-34
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   147   1e-33
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            147   1e-33
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   147   1e-33
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   147   2e-33

>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  173 bits (438), Expect = 3e-41
 Identities = 80/123 (65%), Positives = 97/123 (78%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P DLA+A+ E  +LL QGLIEPT S+WACQAFYV KR++  RGKKRLVIDYKPLN F
Sbjct: 1347 GMSPSDLALAREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHF 1406

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             KD+KFP+PK +S  +   +A  +S FD+  GFWQLG++P DR KTAFC+P+A YQWTVL
Sbjct: 1407 LKDDKFPIPKTSSLNIFLKDAQVYSNFDMKSGFWQLGINPNDRYKTAFCIPNAQYQWTVL 1466

Query: 363  PFG 371
            PFG
Sbjct: 1467 PFG 1469


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  173 bits (438), Expect = 3e-41
 Identities = 81/123 (65%), Positives = 96/123 (78%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P DLA+A+ E  +LL QGLIEPT S+WACQAFYV KR++  RGKKRLVIDYKPLN F
Sbjct: 557 GMSPSDLALAREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHF 616

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KFP+PK +S      +A  +SKFD+  GFWQLG+ P DR KTAFC+P+A YQWTVL
Sbjct: 617 LKDDKFPIPKTSSLNTFLKDAQVYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVL 676

Query: 363 PFG 371
           PFG
Sbjct: 677 PFG 679


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  171 bits (434), Expect = 7e-41
 Identities = 78/123 (63%), Positives = 94/123 (76%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P DL +A+ E  +LL QGLIEPT S WACQAFYV K +++ RGKKRLVIDY+PLN+F
Sbjct: 1235 GMSPSDLLLAQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMF 1294

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFPLP+  S       A  FSKFDL  GFWQLG+ P +R KTAFC+P+AH+QWTVL
Sbjct: 1295 LQDDKFPLPRRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVL 1354

Query: 363  PFG 371
            PFG
Sbjct: 1355 PFG 1357


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  171 bits (434), Expect = 7e-41
 Identities = 78/123 (63%), Positives = 94/123 (76%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P DL +A+ E  +LL QGLIEPT S WACQAFYV K +++ RGKKRLVIDY+PLN+F
Sbjct: 1333 GMSPSDLLLAQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMF 1392

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFPLP+  S       A  FSKFDL  GFWQLG+ P +R KTAFC+P+AH+QWTVL
Sbjct: 1393 LQDDKFPLPRRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVL 1452

Query: 363  PFG 371
            PFG
Sbjct: 1453 PFG 1455


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  171 bits (434), Expect = 7e-41
 Identities = 78/123 (63%), Positives = 94/123 (76%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P DL +A+ E  +LL QGLIEPT S WACQAFYV K +++ RGKKRLVIDY+PLN+F
Sbjct: 1346 GMSPSDLLLAQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMF 1405

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFPLP+  S       A  FSKFDL  GFWQLG+ P +R KTAFC+P+AH+QWTVL
Sbjct: 1406 LQDDKFPLPRRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVL 1465

Query: 363  PFG 371
            PFG
Sbjct: 1466 PFG 1468


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  164 bits (416), Expect = 9e-39
 Identities = 77/123 (62%), Positives = 93/123 (75%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P DLA+A+ E  +LL QGLIEPT  +WACQAFYV KR+K  R KKR+VIDYKPLN F
Sbjct: 1292 GMSPSDLALAREECNQLLQQGLIEPTKFEWACQAFYVEKRSKKIRVKKRMVIDYKPLNHF 1351

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             KD KFP+PK +S  +   +A  +SKFD+  GFWQLG+ P+DR K AFC+P+A YQW VL
Sbjct: 1352 LKDGKFPIPKTSSLNIFLKDAQIYSKFDIKSGFWQLGIDPKDRYKMAFCIPNAQYQWIVL 1411

Query: 363  PFG 371
            PFG
Sbjct: 1412 PFG 1414


>ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 163

 Score =  162 bits (411), Expect = 3e-38
 Identities = 76/122 (62%), Positives = 95/122 (77%)
 Frame = +3

Query: 6   MPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVFF 185
           M P DLA+A+ E  +LL QGLIEPT S+WACQAFYV KR++  RGKKRLVIDYKPLN F 
Sbjct: 1   MSPSDLALAREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFL 60

Query: 186 KDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVLP 365
           KD+KFP+ K +S  +   +A  +SKFD+  GFW+LG+ P+D  KTAFC+P+A YQWT+LP
Sbjct: 61  KDDKFPILKTSSLNIFLKDAQIYSKFDMKSGFWKLGIDPKDCYKTAFCIPNAQYQWTLLP 120

Query: 366 FG 371
           FG
Sbjct: 121 FG 122


>ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 211

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/122 (63%), Positives = 94/122 (77%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P DLA+A+ E  +LL QGLIE T S+WACQAFYV KR++  RGKKRLVIDYKPLN F
Sbjct: 76  GMSPSDLALAREECNQLLKQGLIELTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHF 135

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KFP+ K +S  +   +A+ +SKFD   GFWQL V P+DR KTAFC+P+A YQWTVL
Sbjct: 136 LKDDKFPILKTSSLNIFLKDAHIYSKFDTKFGFWQLRVDPKDRYKTAFCIPNAQYQWTVL 195

Query: 363 PF 368
           PF
Sbjct: 196 PF 197


>ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 293

 Score =  162 bits (411), Expect = 3e-38
 Identities = 75/123 (60%), Positives = 94/123 (76%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P DLA+A+ E  +LL QGLIE T S+WACQA YV KR++  RG+KRLVIDYKPLN F
Sbjct: 165 GMSPSDLALAREECNQLLQQGLIESTKSEWACQAIYVEKRSEKIRGRKRLVIDYKPLNHF 224

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KFP+PK +S  +   +A  +SKF +  GFWQLG+ P+DR KT FC+P+A YQWT+L
Sbjct: 225 LKDDKFPIPKTSSLNIFLKDAQIYSKFYMKSGFWQLGIDPKDRYKTVFCIPNAQYQWTIL 284

Query: 363 PFG 371
           PFG
Sbjct: 285 PFG 287


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  162 bits (409), Expect = 6e-38
 Identities = 76/123 (61%), Positives = 92/123 (74%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P DLA+ + E  +LL QGLIE T  +WACQAFYV KR++  RGKKRL IDYKPLN F
Sbjct: 423 GMSPSDLALVREECNQLLQQGLIELTKFEWACQAFYVEKRSEKIRGKKRLAIDYKPLNHF 482

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KFP+PK +S  +   +A  +SKFD+  GFWQLG+ P DR KTAFC+P+A YQWTVL
Sbjct: 483 LKDDKFPIPKTSSLNIFLKDAQIYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVL 542

Query: 363 PFG 371
            FG
Sbjct: 543 SFG 545


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  158 bits (399), Expect = 8e-37
 Identities = 75/123 (60%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P +LA+ + E  +LL QGLIEPT S+WACQAFYV KR++  R KKRLVIDYKPLN F
Sbjct: 165 GMSPSNLALPREECNQLLKQGLIEPTKSEWACQAFYVEKRSEKVRRKKRLVIDYKPLNHF 224

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KF + K +S  +   +A  +SKFD+  GFWQLG+ P+D  KTAFC+P+A YQWTVL
Sbjct: 225 LKDDKFLISKTSSLNIFLKDAQIYSKFDMKSGFWQLGIDPKDCYKTAFCIPNAQYQWTVL 284

Query: 363 PFG 371
           PFG
Sbjct: 285 PFG 287


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score =  157 bits (397), Expect = 1e-36
 Identities = 72/122 (59%), Positives = 90/122 (73%)
 Frame = +3

Query: 6   MPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVFF 185
           M P+ L +AK E ++L  +GLIE T S WAC+AFYVNKRA+  RGK RLVI+Y+PLN F 
Sbjct: 1   MNPEHLKLAKEELQQLTNEGLIENTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNNFL 60

Query: 186 KDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVLP 365
            D+KFPLP+ N+       A+ FSKFDL  GFWQLG+HP++RPKT FC+   HYQW V+P
Sbjct: 61  ADDKFPLPRRNTLFSQLSNAHVFSKFDLKAGFWQLGIHPDERPKTGFCITDHHYQWKVMP 120

Query: 366 FG 371
           FG
Sbjct: 121 FG 122


>ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 221

 Score =  157 bits (397), Expect = 1e-36
 Identities = 73/123 (59%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           G+ P DLA+ + E  +LL QGL+EPT S+WACQAFYV KR++  RGKKRLVI YKPLN F
Sbjct: 94  GISPSDLALTRKECNQLLKQGLVEPTKSEWACQAFYVEKRSEKMRGKKRLVIHYKPLNHF 153

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KF + K +S  +   +A  +SKFD++ GFWQLGV P+DR KTA C+P+A YQW +L
Sbjct: 154 LKDDKFLILKTSSLNIFLKDAQIYSKFDMNSGFWQLGVDPKDRYKTAICIPNAQYQWKIL 213

Query: 363 PFG 371
           PFG
Sbjct: 214 PFG 216


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/123 (58%), Positives = 85/123 (69%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P    +A  E   L  +GLIE T S WAC+AFYVNKRA+  RGK RLVI+Y+PLN F
Sbjct: 1239 GMNPDHYTLALEEVNLLQKEGLIEKTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNHF 1298

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
              D+KFPLPK         +A  FSKFDL  GFWQLG+ PEDRPKT+FC+P  H+QW V+
Sbjct: 1299 LADDKFPLPKREVLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTSFCIPDHHFQWKVM 1358

Query: 363  PFG 371
            PFG
Sbjct: 1359 PFG 1361


>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
           protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum]
          Length = 735

 Score =  150 bits (378), Expect = 2e-34
 Identities = 73/123 (59%), Positives = 87/123 (70%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GMPP  L  A  E ++L+ QG++  T S WAC+AFYVN RA+  RGK RLVIDYKPLN +
Sbjct: 433 GMPPTLLTQANEECDQLVKQGVVSSTNSPWACKAFYVNNRAEQARGKLRLVIDYKPLNQY 492

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            +D KFPLP   + +     A  FSKFDL  GFWQLGVHP++R KTAFCLP+ H QW VL
Sbjct: 493 LQDVKFPLPIRKALLQHLQGATIFSKFDLKSGFWQLGVHPDERYKTAFCLPNRHLQWNVL 552

Query: 363 PFG 371
           PFG
Sbjct: 553 PFG 555


>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 415

 Score =  148 bits (373), Expect = 9e-34
 Identities = 70/123 (56%), Positives = 88/123 (71%)
 Frame = +3

Query: 3   GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
           GM P DLA+++ E  +LL Q LIEPT  +W  QAFYV KR++  RGK  LVIDYKPLN F
Sbjct: 233 GMSPSDLALSREECNQLLKQDLIEPTKYEWVGQAFYVEKRSEKIRGKNMLVIDYKPLNHF 292

Query: 183 FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
            KD+KFP+ K +S  +   +A  +SKFD+  GFWQ GV P+DR KT FC+P+A YQWT+L
Sbjct: 293 LKDDKFPILKTSSLNIFLKDAQIYSKFDMKSGFWQFGVDPKDRYKTVFCIPNAQYQWTIL 352

Query: 363 PFG 371
            FG
Sbjct: 353 SFG 355


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  147 bits (372), Expect = 1e-33
 Identities = 70/123 (56%), Positives = 84/123 (68%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P    +A  E   L  +GLI+ T S WAC+AFYVNK+A+  RGK RLVI+Y+PLN F
Sbjct: 836  GMNPNHYTLALEEVNLLQKEGLIKTTTSPWACEAFYVNKKAEQVRGKLRLVINYQPLNHF 895

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
              D+KFPLPK         +A  FSKFDL  GFWQLG+ PEDRPKT FC+P  H+QW V+
Sbjct: 896  LADDKFPLPKREVLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTGFCIPDHHFQWKVM 955

Query: 363  PFG 371
            PFG
Sbjct: 956  PFG 958


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  147 bits (371), Expect = 1e-33
 Identities = 68/123 (55%), Positives = 88/123 (71%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P+ L +A  E ++L    LIEP+ S WAC+AFYVNKR++  RGK RLVI+Y+PLN F
Sbjct: 1393 GMNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHF 1452

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFP+P   +      +A  FSKFDL  GFWQLG+HP +RPKT FC+P  H+QW V+
Sbjct: 1453 LQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVM 1512

Query: 363  PFG 371
            PFG
Sbjct: 1513 PFG 1515


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  147 bits (371), Expect = 1e-33
 Identities = 68/123 (55%), Positives = 88/123 (71%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P+ L +A  E ++L    LIEP+ S WAC+AFYVNKR++  RGK RLVI+Y+PLN F
Sbjct: 1393 GMNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHF 1452

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFP+P   +      +A  FSKFDL  GFWQLG+HP +RPKT FC+P  H+QW V+
Sbjct: 1453 LQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVM 1512

Query: 363  PFG 371
            PFG
Sbjct: 1513 PFG 1515


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/123 (55%), Positives = 88/123 (71%)
 Frame = +3

Query: 3    GMPPQDLAVAKTEYEKLLLQGLIEPTISDWACQAFYVNKRAKVKRGKKRLVIDYKPLNVF 182
            GM P+ L +A  E ++L    LIEP+ S WAC+AFYVNKR++  RGK RLVI+Y+PLN F
Sbjct: 1392 GMNPEHLQLAIKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHF 1451

Query: 183  FKDNKFPLPKINSHIVLSGEAYYFSKFDLSLGFWQLGVHPEDRPKTAFCLPHAHYQWTVL 362
             +D+KFP+P   +      +A  FSKFDL  GFWQLG+HP +RPKT FC+P  H+QW V+
Sbjct: 1452 LQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVM 1511

Query: 363  PFG 371
            PFG
Sbjct: 1512 PFG 1514