BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000700
         (1555 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   603   e-170
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   599   e-168
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     584   e-164
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   581   e-163
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   577   e-162
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   568   e-159
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   564   e-158
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   563   e-158
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   563   e-158
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   563   e-158
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   563   e-157
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   563   e-157
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   560   e-157
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   558   e-156
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   554   e-155
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   553   e-155
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     548   e-153
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   545   e-152
ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, part...   543   e-151
ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thal...   539   e-150

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  603 bits (1554), Expect = e-170
 Identities = 319/448 (71%), Positives = 359/448 (80%), Gaps = 11/448 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXX 1373
            RA+K  KRV AVSTDEVS C+++LDY+EAAAKLENIYKLS   +VS+ ED          
Sbjct: 71   RASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQ 130

Query: 1372 XXXXXXL---------SSKVIRNNREKVKRLSIDKRIELRK--EREVVDSRLRNEENKGE 1226
                  L         S  V+R + +K KRLS++KRI L K  + + V S  +  ++K E
Sbjct: 131  RRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNE 190

Query: 1225 NANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDL 1046
            + N++ LVREYS+STDLVSLDWKKMKIPPVLP SEHAWLFKLMQPMK L +VK+ LQKDL
Sbjct: 191  DENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDL 250

Query: 1045 GREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQ 866
            GREPTDGELA A+ MS  QVRR +EVG+AARNKLIKHNLRLVLFVINKYF EF NGP+FQ
Sbjct: 251  GREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQ 310

Query: 865  DLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEI 686
            DLCQAGVKGLITAIDRFEPKR FRLSTYG+FWIRHAI RSMT+SSFTRVSFGLESVR+EI
Sbjct: 311  DLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEI 370

Query: 685  QRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGIT 506
            QRAKLEL F+L R PTEEEII+KVGISPERY EV RASK VLSLHARHATTQEEYINGIT
Sbjct: 371  QRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGIT 430

Query: 505  DIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 326
            D++ V GD+ +Q               +PKESLV+RQRYGLDGKGDRTLGEIAGNL+ISR
Sbjct: 431  DVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISR 490

Query: 325  EMVRKHEVKALMKLKHPARVDYLRRYIF 242
            EMVRKHEVKALMKLKHPARVDYLR+YIF
Sbjct: 491  EMVRKHEVKALMKLKHPARVDYLRQYIF 518


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  599 bits (1544), Expect = e-168
 Identities = 314/447 (70%), Positives = 353/447 (78%), Gaps = 11/447 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXX 1373
            +A K PK VN V TD+ S C L++DY+EAAAKLENIYKLS     SDVE+          
Sbjct: 69   KAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQ 128

Query: 1372 XXXXXXLSSK---------VIRNNREKVKRLSIDKRIELRKEREV--VDSRLRNEENKGE 1226
                   S +         V+RN   ++KRLS+D RI L+K RE   V S  R + ++ E
Sbjct: 129  RRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSSENE 188

Query: 1225 NANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDL 1046
            +  ++RLVR+YS+STDLVSLDW+KMKIPPVLPS EH WLFKLMQPMKAL Q KE LQKDL
Sbjct: 189  SEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDL 248

Query: 1045 GREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQ 866
            GR+PT+ ELA A +MS +QVR+ +EVG+AARNKLIKHNLRLVLF INKYF +F NGPRFQ
Sbjct: 249  GRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQ 308

Query: 865  DLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEI 686
            DLCQAGVKGLITAIDRFEP+RRFRLSTY +FWIRHAI RSMT+SSFTRVSFGLESVR+EI
Sbjct: 309  DLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEI 368

Query: 685  QRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGIT 506
            QRAKLEL FEL REPTEEEIIKKVGISPERYQEV RASKPV SLH+RH+ TQEE+INGIT
Sbjct: 369  QRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGIT 428

Query: 505  DIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 326
            DID V GD R+QP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISR
Sbjct: 429  DIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 488

Query: 325  EMVRKHEVKALMKLKHPARVDYLRRYI 245
            EMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 489  EMVRKHEVKALMKLKHPARVDYLRRYV 515


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  584 bits (1506), Expect = e-164
 Identities = 310/452 (68%), Positives = 356/452 (78%), Gaps = 16/452 (3%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXX 1373
            +A KS  RV AV+TDE S+  +++DY+EAAAKLENI+KLSS    +DVED V        
Sbjct: 70   KAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSS----ADVEDAVGLTSRGRR 125

Query: 1372 XXXXXX------------LSSKVIRNNREKVKRLSIDKRIELRKERE----VVDSRLRNE 1241
                               S  V+RN ++K KRLS+ KR+EL++++E    VV  R R E
Sbjct: 126  RRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKRRE 185

Query: 1240 ENKGENANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEI 1061
             +  E   +E+LVREYS+STDLVSLDWKKMKIPPVLPSSEH WLFKLMQP+K LFQV E 
Sbjct: 186  -SLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGED 244

Query: 1060 LQKDLGREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGN 881
            LQK LGREPT+ ELA A ++SV QV+R +E GRAARNKLIKHNLRLVLFV+NKYF +F N
Sbjct: 245  LQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTN 304

Query: 880  GPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLES 701
            GP+FQDLCQAGV+GLITAIDRFEPKRRFRLSTYG+FWIRHAI RSMTVSSFTRVSFGLES
Sbjct: 305  GPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLES 364

Query: 700  VRLEIQRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEY 521
            VR EIQ+AK+EL+FEL R PTEEEII+KVGISPERY EV RASKPV+SL++RH TTQEE+
Sbjct: 365  VRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEF 424

Query: 520  INGITDIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGN 341
            IN ITD+D V GD R++P              +PKESLVIRQRYGLDGKGDRTLGEIAGN
Sbjct: 425  INAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGN 484

Query: 340  LNISREMVRKHEVKALMKLKHPARVDYLRRYI 245
            LNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 485  LNISREMVRKHEVKALMKLKHPARVDYLRRYM 516


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  581 bits (1497), Expect = e-163
 Identities = 306/450 (68%), Positives = 351/450 (78%), Gaps = 14/450 (3%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREV-SDVEDTVXXXXXXX 1376
            +A K  K V + +TD  S C L++DY+EAAAKLEN+YK S   E  SDVED         
Sbjct: 69   KARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGR 128

Query: 1375 XXXXXXX----------LSSKVIRNNREKVKRLSIDKRIELR--KEREVVDSRLRNEEN- 1235
                              S+ V+RN  +K KRLS++KR+ L+  K+ +V+ S +R  ++ 
Sbjct: 129  KRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSR 188

Query: 1234 KGENANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQ 1055
            K EN  +E LVREYS+STDLVSLDWKKMKIPPVL SSEHAWLFKLMQPMK L +VKE LQ
Sbjct: 189  KNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQ 248

Query: 1054 KDLGREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGP 875
            KDLGREPT+GELA A +MSV QV++ +EVGRAAR+KLIKHNLRLVLFV+NKYF +F NGP
Sbjct: 249  KDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGP 308

Query: 874  RFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVR 695
            +FQDLCQAGVKGLITAIDRFEPKR FRLSTYG+FWIRHAI RSMT+SSFTRVSFGLESVR
Sbjct: 309  KFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVR 368

Query: 694  LEIQRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYIN 515
             EIQ+AKL + F L R PTE+EII+KVGISPERY EV RASKPV SLH+RH TTQEE+IN
Sbjct: 369  AEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFIN 428

Query: 514  GITDIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLN 335
            GITD+D V GD R++P              +PKESLVIRQRYGLDGKGDRTLGEIAGNLN
Sbjct: 429  GITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLN 488

Query: 334  ISREMVRKHEVKALMKLKHPARVDYLRRYI 245
            ISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 489  ISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  577 bits (1488), Expect = e-162
 Identities = 306/450 (68%), Positives = 351/450 (78%), Gaps = 14/450 (3%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVE--DTVXXXXXX 1379
            +A K PK V A   +E  +C L+LDY+EAAAKLEN+YK S   E SDVE  D +      
Sbjct: 70   KARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGR 129

Query: 1378 XXXXXXXXLSSKV---------IRNNREKVKRLSIDKRIELR--KEREVVDSRLRNEENK 1232
                    +  KV         +R+  +K KRLS+DKR+ L+  K+ +V  S +R  ++K
Sbjct: 130  KRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDK 189

Query: 1231 -GENANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQ 1055
              EN  +E LVREYS+STDLVSLDWKKM+IPPVL SSEH WLFKLMQPMK L +VKEILQ
Sbjct: 190  RSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQ 249

Query: 1054 KDLGREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGP 875
            KDLGREP  GELA A +M+V QV+R +EVGRAARNKLIKHNLRLVLFVINKYF +F NGP
Sbjct: 250  KDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGP 309

Query: 874  RFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVR 695
            +FQDLCQAGVKGLITAIDRFEP+RRFRLSTYG+FWIRHAI RSMT+SSFTRVSFGLESVR
Sbjct: 310  KFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVR 369

Query: 694  LEIQRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYIN 515
             EIQ+AKLE+  +L R PTE+EII+KVGISPERY EV RASKPV SL++RH+ TQEE+IN
Sbjct: 370  AEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFIN 429

Query: 514  GITDIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLN 335
            GITD+D V GD R++P              +PKESLVIRQRYGLDGKGDRTLGEIAGNLN
Sbjct: 430  GITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLN 489

Query: 334  ISREMVRKHEVKALMKLKHPARVDYLRRYI 245
            ISREMVRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 490  ISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  568 bits (1465), Expect = e-159
 Identities = 304/443 (68%), Positives = 346/443 (78%), Gaps = 10/443 (2%)
 Frame = -1

Query: 1543 KSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVE--DTVXXXXXXXXX 1370
            K  +RV  V +DE S C LD+DY+EAAAKLENIYKLS     S+V+  D V         
Sbjct: 70   KRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRK 129

Query: 1369 XXXXX------LSSK-VIRNNREKVKRLSIDKRIELRK-EREVVDSRLRNEENKGENANV 1214
                       +S K V+RN  ++ KRLS+DKRIELRK E E V ++ R  ++K E+  +
Sbjct: 130  RIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKTDSKDEHEKI 189

Query: 1213 ERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGREP 1034
            E+LVREYS STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK   QVKE LQKDLGREP
Sbjct: 190  EKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREP 249

Query: 1033 TDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLCQ 854
            TD ELA A +MS +QV++ +EVGRAARNKLIKHNLRLVLFVI KYF +F NGPRFQDLCQ
Sbjct: 250  TDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQ 309

Query: 853  AGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRAK 674
            AGVKGLITAIDRFEPKRRFRLSTYG+FWIRHAI RSMTVSSFTRV FGLESVR EIQRAK
Sbjct: 310  AGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAK 369

Query: 673  LELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDIDD 494
            LEL FEL R PT+EEII+ V ISPERY+EV +ASKP+LSLH+RH  TQEE+INGITD+D 
Sbjct: 370  LELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDG 429

Query: 493  VRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 314
            V  + ++QP              +PKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVR
Sbjct: 430  VENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVR 489

Query: 313  KHEVKALMKLKHPARVDYLRRYI 245
            KHEVK LMKLKHP RVDYLR+++
Sbjct: 490  KHEVKGLMKLKHPTRVDYLRQHM 512


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  564 bits (1454), Expect = e-158
 Identities = 300/444 (67%), Positives = 345/444 (77%), Gaps = 10/444 (2%)
 Frame = -1

Query: 1546 TKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVE--DTVXXXXXXXX 1373
            +K  KRV AV  DE + C+LDLDY+EAAAKLENI+KLS   E SD E  D          
Sbjct: 71   SKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRS 130

Query: 1372 XXXXXXLSSKVIRNNREKVKRLSIDKRIELR--------KEREVVDSRLRNEENKGENAN 1217
                      ++RN  +++KRL +DKRI L+        KE + V S  + +E K E+  
Sbjct: 131  KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDDE 190

Query: 1216 VERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGRE 1037
            ++RLVR+YS+STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMKAL +V+E LQK LGRE
Sbjct: 191  IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGRE 250

Query: 1036 PTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLC 857
            PT+GELA A +M+V QVRR++EVGRAARNKLIKHNLRLVLFVINKYF +F +GP+FQDLC
Sbjct: 251  PTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLC 310

Query: 856  QAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRA 677
            QAGVKGLITAIDRFEPKR+FRLSTY +FWIRHAI RSMT+SSFTRVSFGL+SVR+EIQRA
Sbjct: 311  QAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRA 370

Query: 676  KLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDID 497
            KLEL  EL R PTE EI  KVGIS ERY EV RA+KPV SLH+RH+TT EE INGITD++
Sbjct: 371  KLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVE 430

Query: 496  DVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 317
               GD R+QP              +PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMV
Sbjct: 431  GTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMV 490

Query: 316  RKHEVKALMKLKHPARVDYLRRYI 245
            RKHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  RKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  563 bits (1451), Expect = e-158
 Identities = 293/444 (65%), Positives = 344/444 (77%), Gaps = 8/444 (1%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDT------VXX 1391
            + ++S KRV AVST E S C LD+DY+EAAAKLENIYKLS   +  +VED       V  
Sbjct: 45   KTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLR 104

Query: 1390 XXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELRK--EREVVDSRLRNEENKGENAN 1217
                            V+RN  +K KRLS+DKRI L+   + EV+D   +    K    N
Sbjct: 105  RRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQN 164

Query: 1216 VERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGRE 1037
            ++ L+R+YS+STDLVS+DWKKMKIPPVLPSSEHAWLFKLMQPMKAL Q KE L K++ +E
Sbjct: 165  IDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKE 223

Query: 1036 PTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLC 857
             T GELA A +MS+ QVR+ IEVGRAARNKLIKHNLRLVLFVINKYF +F +GPRFQDLC
Sbjct: 224  ITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLC 283

Query: 856  QAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRA 677
            QAGVKGLITAIDRFEPKRR +LSTY +FWIRH+I RS+T+SSFTRV FGLE VR++IQR 
Sbjct: 284  QAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRT 343

Query: 676  KLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDID 497
            KL+L+FEL R PTEEE+++++GIS ERY EV +ASKP+LSLH+RH TTQEEYINGITD+D
Sbjct: 344  KLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVD 403

Query: 496  DVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 317
             V GD R+Q               +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+V
Sbjct: 404  GVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIV 463

Query: 316  RKHEVKALMKLKHPARVDYLRRYI 245
            RKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 464  RKHEVKALMKLKHPARLDYLRRYV 487


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  563 bits (1451), Expect = e-158
 Identities = 301/447 (67%), Positives = 342/447 (76%), Gaps = 11/447 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXX 1373
            ++ KS  R+ AV T EVS C L +DY+EAAAKLENIYKLS   + SDVED          
Sbjct: 68   KSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQ 126

Query: 1372 XXXXXXLSSK---------VIRNNREKVKRLSIDKRIELR--KEREVVDSRLRNEENKGE 1226
                     K         ++RN  +K KRLS++KRI LR   E ++V S  + ++ K E
Sbjct: 127  RKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKNE 186

Query: 1225 NANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDL 1046
            N  ++ LVREYS+STDLVSLDWKKMKIPPVL SSEH WLFKLMQPMKAL QVKE LQ++L
Sbjct: 187  NEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENL 246

Query: 1045 GREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQ 866
            G EPTD ELA A +M V QVR++I VGRAARNKLIKHNLRLVLFVI KYF +F NG +FQ
Sbjct: 247  GGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQ 306

Query: 865  DLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEI 686
            D CQAGVKGLITAIDRFEPKRRFRLSTYG+FWIRHAI RSMT+SSFTRVSFGLES+R EI
Sbjct: 307  DFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEI 366

Query: 685  QRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGIT 506
            Q+AKLEL F+L R+P E+EII+KV ISPERY EV RASKPVLSLH+RH TTQEE+I GI 
Sbjct: 367  QKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIA 426

Query: 505  DIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 326
            D+D   GD R+Q               +PKESLV+RQRYGLDGKGDRTLGEIAGNLNISR
Sbjct: 427  DVDG--GDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISR 484

Query: 325  EMVRKHEVKALMKLKHPARVDYLRRYI 245
            EMVRKHEVKALMKLKHP RVDYLRRY+
Sbjct: 485  EMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  563 bits (1451), Expect = e-158
 Identities = 293/444 (65%), Positives = 344/444 (77%), Gaps = 8/444 (1%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDT------VXX 1391
            + ++S KRV AVST E S C LD+DY+EAAAKLENIYKLS   +  +VED       V  
Sbjct: 69   KTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLR 128

Query: 1390 XXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELRK--EREVVDSRLRNEENKGENAN 1217
                            V+RN  +K KRLS+DKRI L+   + EV+D   +    K    N
Sbjct: 129  RRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQN 188

Query: 1216 VERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGRE 1037
            ++ L+R+YS+STDLVS+DWKKMKIPPVLPSSEHAWLFKLMQPMKAL Q KE L K++ +E
Sbjct: 189  IDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKE 247

Query: 1036 PTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLC 857
             T GELA A +MS+ QVR+ IEVGRAARNKLIKHNLRLVLFVINKYF +F +GPRFQDLC
Sbjct: 248  ITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLC 307

Query: 856  QAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRA 677
            QAGVKGLITAIDRFEPKRR +LSTY +FWIRH+I RS+T+SSFTRV FGLE VR++IQR 
Sbjct: 308  QAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRT 367

Query: 676  KLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDID 497
            KL+L+FEL R PTEEE+++++GIS ERY EV +ASKP+LSLH+RH TTQEEYINGITD+D
Sbjct: 368  KLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVD 427

Query: 496  DVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 317
             V GD R+Q               +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+V
Sbjct: 428  GVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIV 487

Query: 316  RKHEVKALMKLKHPARVDYLRRYI 245
            RKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 488  RKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  563 bits (1450), Expect = e-157
 Identities = 296/449 (65%), Positives = 342/449 (76%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVE---------DT 1400
            R +K  +RV+AV+  E S   L+LDYSEAAAKLE+IYK S     S+ E           
Sbjct: 69   RVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPR 127

Query: 1399 VXXXXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELRKERE---VVDSRLRNEENKG 1229
                           ++  V++N R+  KRL++D+RI L K +E   V  S  R  +   
Sbjct: 128  TRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDT 187

Query: 1228 ENANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKD 1049
            E+  +++LVREYS +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMKA+ QVKE LQ D
Sbjct: 188  EDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQND 247

Query: 1048 LGREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRF 869
            LGREPTDGE+A A +M  S++R+K+EVGRAARNKLIKHNLRLVLFV+NKYF +F NG RF
Sbjct: 248  LGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRF 307

Query: 868  QDLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLE 689
            QDLCQAGVKGLITAIDRFEP R+FRLSTYG+FWIRHAI RSMT SSFT+V FGLES+R+E
Sbjct: 308  QDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVE 367

Query: 688  IQRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGI 509
            IQ+AKLEL FEL R PT+EEII++VG+SPERY EV + SKPV SLHAR+ TTQEE INGI
Sbjct: 368  IQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEELINGI 427

Query: 508  TDIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 329
            TD+D V GDKRKQP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNIS
Sbjct: 428  TDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 487

Query: 328  REMVRKHEVKALMKLKHPARVDYLRRYIF 242
            REMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 488  REMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  563 bits (1450), Expect = e-157
 Identities = 297/444 (66%), Positives = 344/444 (77%), Gaps = 10/444 (2%)
 Frame = -1

Query: 1546 TKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXXXX 1367
            T   K+    +  EVSS  L++DY+EAAAKLENIYKLS   + SDV+             
Sbjct: 59   TSKGKKRRGKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGLIRKGRQRKR 118

Query: 1366 XXXXLSSK--------VIRNNREKVKRLSIDKRIELRK--EREVVDSRLRNEENKGENAN 1217
                   K        ++RN  +K KRLS+DKRI L+K  E EVV    + +++K +N  
Sbjct: 119  KTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEK 178

Query: 1216 VERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGRE 1037
            +E LVR YS+ST+LVSLDW+KMKIPPVLPS+EHAWLFKLMQPMK L  VK  LQK+LGR+
Sbjct: 179  IEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRD 238

Query: 1036 PTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLC 857
            PTDGELA A +M+V +VR+++EVGRAARNKLIKHNLRLV+FV+NKYF +F NGPRFQDLC
Sbjct: 239  PTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLC 298

Query: 856  QAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRA 677
            QAGVKGLITAIDRFEP+RRF+LSTY +FWIRHAI RSMT+SSFT+VSFGLESVR EIQ+A
Sbjct: 299  QAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKA 358

Query: 676  KLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDID 497
            KLEL  EL R PTEEEII++VGIS ERY EV RA+KP LSLHARHA TQEE+INGITDID
Sbjct: 359  KLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDID 418

Query: 496  DVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 317
               GD R+QP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV
Sbjct: 419  G--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 476

Query: 316  RKHEVKALMKLKHPARVDYLRRYI 245
            RK+EVKALMKLKHPARVDYLRRY+
Sbjct: 477  RKYEVKALMKLKHPARVDYLRRYV 500


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  560 bits (1443), Expect = e-157
 Identities = 295/446 (66%), Positives = 349/446 (78%), Gaps = 10/446 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDT------VXX 1391
            + ++S KRV AVS  E S C LD+DY+EAAAKLENIYKLS   +  ++ED       V  
Sbjct: 69   KTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLW 128

Query: 1390 XXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELRK--EREVVDS--RLRNEENKGEN 1223
                            V+RN  +K KRLS+DKRI L+   + EV+D   ++RN +N+ +N
Sbjct: 129  RRRKVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQKIRNVKNRVQN 188

Query: 1222 ANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLG 1043
             +V  L+R+YS+STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKAL Q KE LQ  +G
Sbjct: 189  IDV--LIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDLQS-VG 245

Query: 1042 REPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQD 863
            +E TDGELA A +MS+ QVR+ IEVGRAARNKLIKHNLRLVLFVI+KYF +F +G RFQD
Sbjct: 246  KEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQD 305

Query: 862  LCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQ 683
            LCQAGVKGLITAIDRFEPKRR +LSTY +FWIRH+I RS+T+SSFTRV FGLE VR++IQ
Sbjct: 306  LCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQ 365

Query: 682  RAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITD 503
            R KL+L+FEL R PTEEE+++++GISPERY EV +ASKP+LSLH+RH TTQEEYINGITD
Sbjct: 366  RTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYINGITD 425

Query: 502  IDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 323
            +D V GD R+Q               +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE
Sbjct: 426  VDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 485

Query: 322  MVRKHEVKALMKLKHPARVDYLRRYI 245
            MVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 486  MVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  558 bits (1439), Expect = e-156
 Identities = 297/443 (67%), Positives = 345/443 (77%), Gaps = 9/443 (2%)
 Frame = -1

Query: 1546 TKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVE--DTVXXXXXXXX 1373
            +K  KRV AV  DE + C+LDLDY+EAAAKLENI+KLS   E SD E  D          
Sbjct: 71   SKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRS 130

Query: 1372 XXXXXXLSSKVIRNNREKVKRLSIDKRIELRKEREVVDSRL-------RNEENKGENANV 1214
                      ++RN  +++KRL +DKRI L+ ++E     L       +NE ++ ++  +
Sbjct: 131  KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDDDEI 190

Query: 1213 ERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGREP 1034
            +RLVR+YS+STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMKAL +V+E LQK LGREP
Sbjct: 191  DRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREP 250

Query: 1033 TDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLCQ 854
            T+GELA A +M+V QVRR++EVGRAARNKLIKHNLRLVLFVINKYF +F +GP+FQDLCQ
Sbjct: 251  TEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQ 310

Query: 853  AGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRAK 674
            AGVKGLITAIDRFEPKR+FRLSTY +FWIRHAI RSMT+SSFTRVSFGL+SVR+EIQRAK
Sbjct: 311  AGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAK 370

Query: 673  LELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDIDD 494
            LEL  EL R PTE EI  KVGIS ERY EV RA+KPV SLH+RH+TT EE INGITD++ 
Sbjct: 371  LELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEG 430

Query: 493  VRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 314
              GD R+QP              +PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 431  TGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVR 490

Query: 313  KHEVKALMKLKHPARVDYLRRYI 245
            KHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  KHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  554 bits (1427), Expect = e-155
 Identities = 295/449 (65%), Positives = 338/449 (75%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLS----SPR-EVSDV----EDT 1400
            R +K  +RV+AV T E     L+LDYSEAAAKLE+IYK S    SP  EV D        
Sbjct: 69   RVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPR 127

Query: 1399 VXXXXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELRKERE---VVDSRLRNEENKG 1229
                           +   V++N R+K KRL++D+RI L K +E   +  S  R      
Sbjct: 128  TRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDT 187

Query: 1228 ENANVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKD 1049
            E+  +++LVREYS +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMKA+ QVKE LQ D
Sbjct: 188  EDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQND 247

Query: 1048 LGREPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRF 869
            LGREPTDGE+A A +M  S++R+K+E GRAARNKLIKHNLRLVLFV+NKYF +F N  RF
Sbjct: 248  LGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRF 307

Query: 868  QDLCQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLE 689
            QDLCQAGVKGLITAIDRFEP R+FRLSTYG+FWIRHAI R MT SSFT+V FGLES+R+E
Sbjct: 308  QDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVE 367

Query: 688  IQRAKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGI 509
            IQ+AKLEL FEL R PT++EIIK+VG SPERY EV + SKP+ SLHAR+ TTQEE INGI
Sbjct: 368  IQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGI 427

Query: 508  TDIDDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 329
            TD+D V GDKRKQP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNIS
Sbjct: 428  TDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 487

Query: 328  REMVRKHEVKALMKLKHPARVDYLRRYIF 242
            REMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 488  REMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  553 bits (1425), Expect = e-155
 Identities = 284/446 (63%), Positives = 346/446 (77%), Gaps = 9/446 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVS--DVEDTVXXXXXX 1379
            +  K  +RVNAVSTDE     +DLDY+EAAAKLE I+K S   E+S  +V+D        
Sbjct: 69   KVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKDVRVKRRQP 128

Query: 1378 XXXXXXXXLSSK----VIRNNREKVKRLSIDKRIELRKEREVVDSRLRNEENKGEN---A 1220
                     + K    V+R+ R K +RL+++KRI LR ++E   + +      G+N    
Sbjct: 129  RKRTEYADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDE 188

Query: 1219 NVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGR 1040
             ++RLVR+YS+S+DLVSLDWKKMKIPPVLPS+EH WLFKLMQP+KA+  VKE ++ +LGR
Sbjct: 189  KIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGR 248

Query: 1039 EPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDL 860
            EPTD +LA A++M   Q+R+++E+GRAARNKLIKHNLRLVLFV+NKYF +F NG RFQDL
Sbjct: 249  EPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDFSNGSRFQDL 308

Query: 859  CQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQR 680
            CQAG KGLITAIDRFEPKR+ RLSTYG+FWIRH+I RSMT+SSFT+VSFGLESVR+EI++
Sbjct: 309  CQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGLESVRVEIRK 368

Query: 679  AKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDI 500
            AKLEL FEL R PT+EEI+ +VGIS ERY EV R SKP++SLHARH+ TQEE+INGITD+
Sbjct: 369  AKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQEEFINGITDV 428

Query: 499  DDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 320
            D V GD+RKQP              +PKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREM
Sbjct: 429  DGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREM 488

Query: 319  VRKHEVKALMKLKHPARVDYLRRYIF 242
            VRK+EVKALMKLKH ARVDYLRRY+F
Sbjct: 489  VRKYEVKALMKLKHRARVDYLRRYVF 514


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  548 bits (1412), Expect = e-153
 Identities = 283/438 (64%), Positives = 343/438 (78%), Gaps = 5/438 (1%)
 Frame = -1

Query: 1543 KSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXXXXX 1364
            K+PK+ +++  +   SC+L +DY+EAAA+LE+IYKLS    V D  D             
Sbjct: 73   KTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVEDDIDGSKVKVSRRRRRK 132

Query: 1363 XXXLSSKVI-RNNREKVKRLSIDKRIELRK---EREVVDSRLRNEENKG-ENANVERLVR 1199
                  KV+ RNN  K KRLS+DKRI L++   E+ +V S  +    K  E   +ERLVR
Sbjct: 133  EGGEEKKVVVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEEEKIERLVR 192

Query: 1198 EYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGREPTDGEL 1019
            +YS+S D+VSLDWKKMKIPPVLPS+EHAWLFKLMQPMKAL QVK+ LQK LGREP + E+
Sbjct: 193  DYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLGREPRETEI 252

Query: 1018 AAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLCQAGVKG 839
            A  ++MS ++V+RKIE+GRAARNKLIKHNLRLVLFV+NKYF +F NGP+FQDLCQAG++G
Sbjct: 253  AGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGMRG 312

Query: 838  LITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRAKLELSF 659
            LITAIDRFEPKR+FRLSTYG+FWIRHAI RSMT S+FTRV FGLESVR+EI + K+EL F
Sbjct: 313  LITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKTKMELLF 372

Query: 658  ELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDIDDVRGDK 479
            ELGR PTE+E+++++ ISPERY+EV RA+KPV SL+++H+ TQEE+INGITD+D V  D 
Sbjct: 373  ELGRLPTEDEVVERLKISPERYREVLRAAKPVFSLNSKHSVTQEEFINGITDVDGVGADN 432

Query: 478  RKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 299
            R+QP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK
Sbjct: 433  RRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 492

Query: 298  ALMKLKHPARVDYLRRYI 245
            ALMKLKH ARVDYLR+YI
Sbjct: 493  ALMKLKHQARVDYLRQYI 510


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
            gi|561034810|gb|ESW33340.1| hypothetical protein
            PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  545 bits (1404), Expect = e-152
 Identities = 284/445 (63%), Positives = 342/445 (76%), Gaps = 9/445 (2%)
 Frame = -1

Query: 1552 RATKSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDT------VXX 1391
            +   S KRV AVSTDE +   LD+DY+EAAAKLENIYKLSS     D ED       V  
Sbjct: 69   KTNDSVKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDIDSKTKRVLR 128

Query: 1390 XXXXXXXXXXXXLSSKVIRNNREKVKRLSIDKRIELR---KEREVVDSRLRNEENKGENA 1220
                            V+RN  +K KRLS+DKRI L+   K+  +V ++ + + N+ EN 
Sbjct: 129  RRKNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKKRDVNRIEN- 187

Query: 1219 NVERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGR 1040
             ++ L+REYS+STDLVS+DWKK+KIPPVLPSSEHAWLFKLM+PMK L QV+E LQ ++G+
Sbjct: 188  -IDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGK 245

Query: 1039 EPTDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDL 860
            E +DGELA A  +SV QVR+ +EVG+AARNKLIKHNLRLVLFVINKYF +F +GPRFQDL
Sbjct: 246  EISDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDL 305

Query: 859  CQAGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQR 680
            CQAGVKGLITAIDRFE KRR +LSTY +FWIRH+I RS+T+SS TRV FGL+ VR +I R
Sbjct: 306  CQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHR 365

Query: 679  AKLELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDI 500
            AKLEL FEL R PTE+E+++++GISPERY +V +ASKP++SLH+RH  TQEE+INGITD+
Sbjct: 366  AKLELRFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDL 425

Query: 499  DDVRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 320
            D V GD R+Q               +PKESLV+RQRYGLDGKGDRTLGEIAGNLNISREM
Sbjct: 426  DGVDGDNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREM 485

Query: 319  VRKHEVKALMKLKHPARVDYLRRYI 245
            VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 486  VRKHEVKALMKLKHPARLDYLRRYV 510


>ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, partial [Capsella rubella]
            gi|482556108|gb|EOA20300.1| hypothetical protein
            CARUB_v10000608mg, partial [Capsella rubella]
          Length = 557

 Score =  543 bits (1398), Expect = e-151
 Identities = 280/442 (63%), Positives = 342/442 (77%), Gaps = 9/442 (2%)
 Frame = -1

Query: 1543 KSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSD---VEDTVXXXXXXXX 1373
            K+PK+ +++  +   SC+L +DY+EAAA+LENIYKLS    +SD   V+D          
Sbjct: 115  KTPKKPSSLDHNVAPSCSLGVDYNEAAARLENIYKLSPTTTISDDEAVDDGGSKGKVSPR 174

Query: 1372 XXXXXXLSSK--VIRNNREKVKRLSIDKRIELRKERE----VVDSRLRNEENKGENANVE 1211
                     K  V+RNN +K KRLS+DKRI L++  +    V  +  +  + + E   ++
Sbjct: 175  RKRKQRGEEKKVVVRNNVKKDKRLSLDKRIALKRNCQEKPFVASAEKKVTKKQQEEEKID 234

Query: 1210 RLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGREPT 1031
             LVR+YS S D++SLDWKKMKIPPVL S+EHAWLFKLMQPMKAL +VK+ LQK LGREP 
Sbjct: 235  MLVRDYSVSNDILSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLEVKDELQKSLGREPR 294

Query: 1030 DGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLCQA 851
            + E+A  + M+  +V++KIE+GRAARNKLIKHNLRLVLFV+NKYF EF NGP+FQDLCQA
Sbjct: 295  EAEIAGEIKMTTGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFQEFTNGPKFQDLCQA 354

Query: 850  GVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRAKL 671
            G+KGLITAIDRFEPKR+FRLSTYG+FWIRHAI RSMT S+FTRV FGLESVR+EI +AK+
Sbjct: 355  GMKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKM 414

Query: 670  ELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDIDDV 491
            EL FELGR PTE+E+IK++ I+PERY+EV RA+KPV SL+++HA TQEE+INGITD+D V
Sbjct: 415  ELLFELGRLPTEDEVIKRLKITPERYREVLRAAKPVFSLNSKHAVTQEEFINGITDVDGV 474

Query: 490  RGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 311
              D R+QP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 475  GADNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 534

Query: 310  HEVKALMKLKHPARVDYLRRYI 245
            HEVKALMKLKH ARVDYLR+YI
Sbjct: 535  HEVKALMKLKHQARVDYLRQYI 556


>ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thaliana]
            gi|75267675|sp|Q9ZNX9.1|SIGE_ARATH RecName: Full=RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial; Short=Sigma factor E;
            Short=Sigma-E; AltName: Full=RNA polymerase sigma factor
            sig5; Short=Atsig5; Short=Sigma factor 5; Flags:
            Precursor gi|4033838|emb|CAA77213.1| sigma-like factor
            [Arabidopsis thaliana] gi|4972299|dbj|BAA78109.1| RNA
            polymerase sigma subunit SigE [Arabidopsis thaliana]
            gi|10178160|dbj|BAB11572.1| sigma-like factor
            [Arabidopsis thaliana] gi|222423237|dbj|BAH19595.1|
            AT5G24120 [Arabidopsis thaliana]
            gi|332005876|gb|AED93259.1| RNA polymerase sigma factor 5
            [Arabidopsis thaliana]
          Length = 517

 Score =  539 bits (1388), Expect = e-150
 Identities = 278/443 (62%), Positives = 345/443 (77%), Gaps = 10/443 (2%)
 Frame = -1

Query: 1543 KSPKRVNAVSTDEVSSCALDLDYSEAAAKLENIYKLSSPREVSDVEDTVXXXXXXXXXXX 1364
            K+PK+  ++  +   SC+L +DY+EAAA+LE+IYKLS P   + VED V           
Sbjct: 75   KTPKKPLSLEHNSAPSCSLGVDYNEAAARLESIYKLS-PATTTLVEDDVEDGGSKAKVSR 133

Query: 1363 XXXLSSK------VIRNNREKVKRLSIDKRIELRK---EREVVDSRLRN-EENKGENANV 1214
                         V+RNN +K KR+S+DKRI L++   E+ VV S  +   + + E   +
Sbjct: 134  RRKRKESGEEKKVVVRNNVKKEKRMSLDKRIALKRNVQEKPVVASVDKKVTKRQQEEEKI 193

Query: 1213 ERLVREYSSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKALFQVKEILQKDLGREP 1034
            ERLVR+YS+S D+VSLDWKKMKIPPVL S+EHAWLFKLMQPMKAL +VK++LQK LGREP
Sbjct: 194  ERLVRDYSASNDIVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLEVKDVLQKSLGREP 253

Query: 1033 TDGELAAAVDMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFLEFGNGPRFQDLCQ 854
             + E+A  ++M+  +V++KIE+GRAARNKLIKHNLRLVLFV+NKYF EF NGP+FQDLCQ
Sbjct: 254  REAEIAGEINMTAGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFHEFTNGPKFQDLCQ 313

Query: 853  AGVKGLITAIDRFEPKRRFRLSTYGVFWIRHAITRSMTVSSFTRVSFGLESVRLEIQRAK 674
            AG++GLITAIDRFEPKR+FRLSTYG+FWIRHAI RSMT S+FTRV FGLESVR+EI +AK
Sbjct: 314  AGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAK 373

Query: 673  LELSFELGREPTEEEIIKKVGISPERYQEVRRASKPVLSLHARHATTQEEYINGITDIDD 494
             EL FE+GR PTE+E+++++ I+PERY+EV RA+KPVLSL+++H+ TQEE+INGITD+D 
Sbjct: 374  TELWFEMGRPPTEDEVVERLKITPERYREVLRAAKPVLSLNSKHSVTQEEFINGITDVDG 433

Query: 493  VRGDKRKQPXXXXXXXXXXXXXXRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 314
            V  +  +QP              +PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR
Sbjct: 434  VGANNSRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 493

Query: 313  KHEVKALMKLKHPARVDYLRRYI 245
            KHEVKALMKLKH ARVDYLR+YI
Sbjct: 494  KHEVKALMKLKHQARVDYLRQYI 516