BLASTX nr result
ID: Cocculus22_contig00000301
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00000301
(697 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi... 261 2e-67
ref|XP_007015425.1| Pentatricopeptide repeat superfamily protein... 254 3e-65
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,... 253 3e-65
ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containi... 242 8e-62
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera] 242 8e-62
ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 242 1e-61
ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containi... 240 4e-61
ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Popu... 240 4e-61
ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citr... 239 8e-61
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ... 236 4e-60
ref|XP_007137642.1| hypothetical protein PHAVU_009G143500g, part... 234 3e-59
gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis] 233 6e-59
ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containi... 225 1e-56
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi... 217 3e-54
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi... 217 3e-54
ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containi... 214 3e-53
ref|XP_002873896.1| pentatricopeptide repeat-containing protein ... 203 4e-50
ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutr... 201 1e-49
ref|NP_974803.1| pentatricopeptide repeat-containing protein [Ar... 197 3e-48
ref|XP_006287559.1| hypothetical protein CARUB_v10000770mg [Caps... 189 6e-46
>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 261 bits (667), Expect = 2e-67
Identities = 122/179 (68%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPV-ETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIF 358
LPWISPL Y+ SPKPDPP E T+ + +P++KPKFI+HESA+++IK E DPQ ALEIF
Sbjct: 21 LPWISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIF 80
Query: 357 NMVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSK 178
N V EQRGF+HN++TY+ ILHKLA+SKKF+A+DA+L QM++E CKFHEG+FLNLM HFSK
Sbjct: 81 NRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSK 140
Query: 177 ASHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
S HER ++MF AI+PIVREKPSLKA+STCLNLLVES Q+DL RK L+ SK+ L+L+PN
Sbjct: 141 LSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPN 199
>ref|XP_007015425.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|590585358|ref|XP_007015426.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508785788|gb|EOY33044.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508785789|gb|EOY33045.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao]
Length = 530
Score = 254 bits (648), Expect = 3e-65
Identities = 121/201 (60%), Positives = 155/201 (77%)
Frame = -2
Query: 603 MDPMRFYLNRRRWFXXXXXXXXSLPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFI 424
M+ + +R F LPWISPL ++K S K DPP E L + +RKP+F+
Sbjct: 1 MNSVGVSFRNQRSFSSSSTSSSLLPWISPLQFLKANSQKRDPPPEIPYTLTESQRKPRFV 60
Query: 423 THESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQ 244
+HE+A+++IK ERDPQ ALEIFN V+EQ+GF+HN++TY ILHKL QSKKF+A+D+ILRQ
Sbjct: 61 SHETAINLIKRERDPQRALEIFNRVSEQKGFSHNNATYGTILHKLVQSKKFQAIDSILRQ 120
Query: 243 MSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESG 64
M++E CKFHEG+FLNLM HFSK S H+R L+MF+AIQPIVREKPSLKA+STCLNLL+ES
Sbjct: 121 MTYETCKFHEGVFLNLMKHFSKFSLHDRVLEMFYAIQPIVREKPSLKAISTCLNLLIESN 180
Query: 63 QLDLARKLLVESKRRLDLKPN 1
Q+DLAR L+ SK+ L L+PN
Sbjct: 181 QVDLARHFLLNSKKSLRLRPN 201
>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 521
Score = 253 bits (647), Expect = 3e-65
Identities = 122/198 (61%), Positives = 152/198 (76%)
Frame = -2
Query: 594 MRFYLNRRRWFXXXXXXXXSLPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHE 415
MRF+ ++ R S PWISPL + K PD P ET+S L + RK KFI+HE
Sbjct: 1 MRFFCHKHRLLSTSSATSYSFPWISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHE 60
Query: 414 SAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSF 235
SA+++IK E+DPQHALEIFNMV EQ+GFNHNH+TYS ++HKLAQ+KKF AVDA+L QM++
Sbjct: 61 SAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTY 120
Query: 234 EACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLD 55
E CKFHE +FLNLM HF K+S HER L+MF+AIQPIVREKPSLKA+STCLN+LVES Q+D
Sbjct: 121 ETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQID 180
Query: 54 LARKLLVESKRRLDLKPN 1
LA+K L+ L ++PN
Sbjct: 181 LAQKCLLYVNEHLKVRPN 198
>ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like isoform X1 [Cicer arietinum]
gi|502133024|ref|XP_004501624.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g18475-like isoform X2 [Cicer arietinum]
Length = 510
Score = 242 bits (618), Expect = 8e-62
Identities = 115/178 (64%), Positives = 147/178 (82%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFN 355
LPWISPL++ KP K DPP E T + +RK K+ITH+ A+++IK E+DPQHAL+IFN
Sbjct: 22 LPWISPLNFSKP---KLDPPPEITLPSNETRRKNKYITHDVAINLIKREKDPQHALKIFN 78
Query: 354 MVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKA 175
MV+EQ+GFNHN++TY+ ILHKLAQ KKF+AVD +L QM++E C+FHEG+F+NLM H+SK
Sbjct: 79 MVSEQKGFNHNNATYASILHKLAQFKKFQAVDRVLHQMTYETCQFHEGIFINLMKHYSKC 138
Query: 174 SHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
S HE+ LD FF+IQPIVREKPS KA+STCLNLLV+S Q+DLAR+LL+ +KR L KPN
Sbjct: 139 SFHEKVLDAFFSIQPIVREKPSPKAISTCLNLLVDSNQVDLARQLLLHAKRSLIYKPN 196
>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 242 bits (618), Expect = 8e-62
Identities = 120/195 (61%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
Frame = -2
Query: 624 FKTLMTVMDPMRFYLNRRRWFXXXXXXXXSLPWISPLHYIKPVSPKPDPPV-ETTSVLQQ 448
FK L +M+P Y R + SLPWISPL Y+ SPKPDPP E T+ + +
Sbjct: 64 FKNLCCLMNPFXEY---RCFSCSPSAPSSSLPWISPLQYLNATSPKPDPPATEATTTMVE 120
Query: 447 PKRKPKFITHESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFK 268
P++KPKFI+HESA+++IK E DPQ ALEIFN V EQRGF+HN++TY+ ILHKLA+SKKF+
Sbjct: 121 PRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQ 180
Query: 267 AVDAILRQMSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTC 88
A+DA+L QM++E CKFHEG+FLNLM HFSK S HER ++MF AI PIVREKPSLKA+STC
Sbjct: 181 AIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTC 240
Query: 87 LNLLVESGQLDLARK 43
LNLLVES Q + K
Sbjct: 241 LNLLVESNQSSITAK 255
>ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Fragaria vesca subsp. vesca]
Length = 568
Score = 242 bits (617), Expect = 1e-61
Identities = 120/208 (57%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Frame = -2
Query: 621 KTLMTVMDPMRFYLNRRRWFXXXXXXXXS-LPWISPLHYIKPVSPKPDPPVETTSVLQQP 445
KT++ M+ R + + RRWF S + WISPL K + +PDPP +T + +
Sbjct: 49 KTVVVFMNLRRVHFSWRRWFASSPSTISSSVSWISPLKLSKLNAHQPDPPPDTRT---EA 105
Query: 444 KRKPKFITHESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFKA 265
+RK K+I+H +A+++IK ERDPQHALEIFNMV+EQ+GFNHN++TY+ IL+KL+QSKKFKA
Sbjct: 106 RRKSKYISHNAAINLIKRERDPQHALEIFNMVSEQKGFNHNNATYATILNKLSQSKKFKA 165
Query: 264 VDAILRQMSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTCL 85
VDA+L QM ++ CKFHEG+FLNLM HFSK S HER L+MF AIQPIVREKPSLK +STCL
Sbjct: 166 VDAVLYQMKYDTCKFHEGIFLNLMKHFSKFSMHERVLEMFHAIQPIVREKPSLKCISTCL 225
Query: 84 NLLVESGQLDLARKLLVESKRRLDLKPN 1
NLL+E+ Q+D+A++ L+ K+ L+LK N
Sbjct: 226 NLLIEANQVDMAQQFLMHLKKSLNLKLN 253
>ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like isoform X1 [Citrus sinensis]
gi|568836969|ref|XP_006472505.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g18475-like isoform X2 [Citrus sinensis]
Length = 521
Score = 240 bits (612), Expect = 4e-61
Identities = 119/201 (59%), Positives = 150/201 (74%)
Frame = -2
Query: 603 MDPMRFYLNRRRWFXXXXXXXXSLPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFI 424
M+ +RF L + F SLPWISPL IK +PK DPPVET+ +++ +FI
Sbjct: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFI 60
Query: 423 THESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQ 244
+H +A+S+IK E++PQ ALEIFN V+EQ+GFNHN++TY+ IL KLA+ KKF+AVDA+LRQ
Sbjct: 61 SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
Query: 243 MSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESG 64
M++E CKFHEG+FLNLM HFS S HER L+MF I PI REKPSLKA+STCLNLL+ES
Sbjct: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
Query: 63 QLDLARKLLVESKRRLDLKPN 1
Q+DLA+ L S R L LKPN
Sbjct: 181 QVDLAQNFLKYSNRHLRLKPN 201
>ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| hypothetical protein
POPTR_0002s10380g [Populus trichocarpa]
Length = 509
Score = 240 bits (612), Expect = 4e-61
Identities = 118/178 (66%), Positives = 147/178 (82%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFN 355
LPWISPLH++ +PK DPP +T L +P+RKPKFI+HE+AV++IK ERDPQHALEIFN
Sbjct: 18 LPWISPLHFL---TPKLDPPPKT---LLEPRRKPKFISHETAVNLIKHERDPQHALEIFN 71
Query: 354 MVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKA 175
+V EQ+GFNHNH+TYS I+ KLA++KKF+AVDA+LRQM +E CKFHE LFLNLM +F+K+
Sbjct: 72 LVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKS 131
Query: 174 SHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
S ER ++MF IQPIVREKPSLKA+STCLNLLVES Q+DL R L++ + LKPN
Sbjct: 132 SEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPN 189
>ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citrus clementina]
gi|567882597|ref|XP_006433857.1| hypothetical protein
CICLE_v10000867mg [Citrus clementina]
gi|557535978|gb|ESR47096.1| hypothetical protein
CICLE_v10000867mg [Citrus clementina]
gi|557535979|gb|ESR47097.1| hypothetical protein
CICLE_v10000867mg [Citrus clementina]
Length = 521
Score = 239 bits (609), Expect = 8e-61
Identities = 118/201 (58%), Positives = 148/201 (73%)
Frame = -2
Query: 603 MDPMRFYLNRRRWFXXXXXXXXSLPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFI 424
M+ +RF L + F SLPWISPL IK +PK DPPVET+ +++ KFI
Sbjct: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSKFI 60
Query: 423 THESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQ 244
+H +A+S+IK E++PQ ALEIFN V+EQ+GFNHN+ TY+ IL KL + KKF+AVDA+LRQ
Sbjct: 61 SHGAAISLIKCEKEPQRALEIFNTVSEQKGFNHNNGTYATILDKLVRYKKFQAVDAVLRQ 120
Query: 243 MSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESG 64
M++E CKFHEG+FLNLM HFS S HER L+MF I PI REKPSLKA+STCLNLL+ES
Sbjct: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
Query: 63 QLDLARKLLVESKRRLDLKPN 1
Q+DLA+ L S + L LKPN
Sbjct: 181 QVDLAQNFLKYSNQHLRLKPN 201
>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 236 bits (603), Expect = 4e-60
Identities = 111/178 (62%), Positives = 145/178 (81%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFN 355
LPWISPL++ KP+ PK DPP E V+ + ++K K+ITH+ A+++IK E+DPQHAL+IFN
Sbjct: 97 LPWISPLNFTKPLEPKLDPPPEI--VVAETRKKSKYITHDVAINLIKREKDPQHALKIFN 154
Query: 354 MVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKA 175
MV+EQ+GFNHN++TY+ IL KLAQ KKF+AVD +L QM++EACKFHEG+F+NLM H+SK
Sbjct: 155 MVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKC 214
Query: 174 SHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
HE+ D F +IQ IVREKPS KA+S+CLNLLV+S Q+DL RKLL+ +KR L KPN
Sbjct: 215 GFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPN 272
>ref|XP_007137642.1| hypothetical protein PHAVU_009G143500g, partial [Phaseolus
vulgaris] gi|561010729|gb|ESW09636.1| hypothetical
protein PHAVU_009G143500g, partial [Phaseolus vulgaris]
Length = 742
Score = 234 bits (596), Expect = 3e-59
Identities = 110/178 (61%), Positives = 144/178 (80%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFN 355
LPWISPL + KP PKPDPP ET +P RK KFI+H+ A+++IK E+DPQ AL+IFN
Sbjct: 29 LPWISPLKFTKPAQPKPDPPPETAV---EPPRKRKFISHDGAINLIKREKDPQLALKIFN 85
Query: 354 MVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKA 175
MV++Q+GF HN++TY+ IL KLA+ KF AVD +L QM++E CKFHEG+F+NLMSHFSK+
Sbjct: 86 MVSQQKGFQHNNATYATILEKLARCNKFHAVDRVLHQMTYETCKFHEGIFVNLMSHFSKS 145
Query: 174 SHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
S H++ L FF+IQPIVR+KPS KA++TCLNLL++S ++DLARKLL+ +KR L KPN
Sbjct: 146 SLHDKVLQAFFSIQPIVRDKPSPKALTTCLNLLLDSNRVDLARKLLLHAKRGLTHKPN 203
>gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis]
Length = 513
Score = 233 bits (593), Expect = 6e-59
Identities = 111/176 (63%), Positives = 140/176 (79%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
WISP+ K S KPDPP E+ + + +RK K+I+H++A+++IK ERDPQ ALEIFN V
Sbjct: 27 WISPVQLSKASSKKPDPPTESIASSLEGRRKAKYISHDTAINLIKRERDPQRALEIFNSV 86
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
+EQ+GFNHN TYS ILHKLA SKKF A+DAILRQM +E CKFHE +FLNLM HFSK +
Sbjct: 87 SEQKGFNHNGDTYSTILHKLALSKKFGAIDAILRQMMYETCKFHEPIFLNLMKHFSKYAL 146
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
HE+ L+MF AI+ I REKPSLKA+STCLNLLVE+ ++DLAR+ L+ S++ L LKPN
Sbjct: 147 HEKVLEMFHAIRSIAREKPSLKAISTCLNLLVEANRIDLARQFLMHSRKNLSLKPN 202
>ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Solanum tuberosum]
Length = 511
Score = 225 bits (573), Expect = 1e-56
Identities = 105/176 (59%), Positives = 140/176 (79%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
WISPLHY S +PD P++ +Q RK K+I+HESAV++IK ERD + ALEIFN V
Sbjct: 24 WISPLHYQGRNSLRPDAPIKRDGTSEQLPRKRKYISHESAVNLIKQERDARRALEIFNKV 83
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
++Q+GFNHN+STY+++LH+LA KKF+ VDAI+ QM +E CKFHEG+F NLM H+SK+S
Sbjct: 84 SDQKGFNHNNSTYAVLLHRLAVCKKFETVDAIIHQMKYETCKFHEGVFTNLMKHYSKSSL 143
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
HE+ L+MF AI PIVREKPSL A+STCLNLL+E+ Q++LA++ L+ ++ LDLKPN
Sbjct: 144 HEKVLEMFNAILPIVREKPSLNAISTCLNLLIEAKQIELAKEFLLNVQKHLDLKPN 199
>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 217 bits (553), Expect = 3e-54
Identities = 101/155 (65%), Positives = 131/155 (84%)
Frame = -2
Query: 465 TSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMVTEQRGFNHNHSTYSIILHKLA 286
TS Q K K +I+HE+A+ +IK ERDPQHAL+IFNMV+EQ+GFNHNH+TY+ I+ LA
Sbjct: 35 TSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLA 94
Query: 285 QSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASHHERTLDMFFAIQPIVREKPSL 106
+ KKF+A+D +L QM+++ CK HEG+FLNLM HFSK+S HER LDMF+AI+ IVREKPSL
Sbjct: 95 KYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSL 154
Query: 105 KAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
KA+STCLNLLVES ++DLARKLLV ++ +L+L+PN
Sbjct: 155 KAISTCLNLLVESDRVDLARKLLVNARSKLNLRPN 189
>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 217 bits (553), Expect = 3e-54
Identities = 107/178 (60%), Positives = 135/178 (75%)
Frame = -2
Query: 534 LPWISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFN 355
LPWISPL + K P P+P L P RK K I+H+SA+ +IK E+DPQHAL IFN
Sbjct: 63 LPWISPLKFTK-ADPPPEP-------LPSPPRKRKHISHDSAIDLIKREKDPQHALNIFN 114
Query: 354 MVTEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKA 175
MV+EQ GF HN++TY+ IL KLA+ F AVD +L QM++E CKFHEG+F+NLM HFSK+
Sbjct: 115 MVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKS 174
Query: 174 SHHERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
S HE+ L +F+IQPIVREKPS KA+STCLNLL++S ++DLARKLL+ +KR L KPN
Sbjct: 175 SLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPN 232
>ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Solanum lycopersicum]
Length = 511
Score = 214 bits (544), Expect = 3e-53
Identities = 101/176 (57%), Positives = 137/176 (77%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
WISPL Y S +P P+E +Q RK K+I+HESAV++IK E+D + ALEIFN V
Sbjct: 24 WISPLDYQGRNSLRPGAPIERDGTSEQVPRKRKYISHESAVNLIKQEKDARRALEIFNKV 83
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
++Q+GFNHN+STY+++LH+LA KKF+ V+AI+ QM +E CKFHEG+F NLM H+S++S
Sbjct: 84 SDQKGFNHNNSTYAVLLHRLAVCKKFETVEAIIHQMKYETCKFHEGVFTNLMKHYSRSSL 143
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
HE+ L+MF AI PIVREKPSL A+STCLNLLVE+ Q++LA++ L+ ++ L LKPN
Sbjct: 144 HEKVLEMFDAILPIVREKPSLNAISTCLNLLVEAKQIELAKEFLLNVQKHLYLKPN 199
>ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319733|gb|EFH50155.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 507
Score = 203 bits (517), Expect = 4e-50
Identities = 96/176 (54%), Positives = 130/176 (73%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
W+SP+ + + K DPP E++ + K KFI+HES VS++K ERDPQ AL+IFN
Sbjct: 21 WVSPICFSEKKKKKLDPPPESSISTMETNPKTKFISHESTVSLMKRERDPQRALDIFNKA 80
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
++Q+GFNHN++TYS++L L + KKF AVDAIL QM +E C+F E LFLNLM HFS+
Sbjct: 81 SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDL 140
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
H++ ++MF IQ I R KPSL A+STCLNLL++SG++DLARKLL+ +K L L+PN
Sbjct: 141 HDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPN 196
>ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutrema salsugineum]
gi|557104705|gb|ESQ45039.1| hypothetical protein
EUTSA_v10010303mg [Eutrema salsugineum]
Length = 505
Score = 201 bits (512), Expect = 1e-49
Identities = 96/176 (54%), Positives = 133/176 (75%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
W+SP+ + + KPDPP E++ + K KFI+HESAV++IK ERDPQ AL++FN++
Sbjct: 21 WVSPICFTEKT--KPDPPPESSISHVETNPKTKFISHESAVNLIKCERDPQCALDVFNIL 78
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
+ Q+GFNHN +TYS++L L + KKF+AVDAIL QM +E C+F EG+FLNLM H+S+
Sbjct: 79 SRQKGFNHNSATYSVLLDNLVRHKKFQAVDAILNQMKYETCRFQEGVFLNLMRHYSRFDL 138
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
HE+ ++MF I I R KPSL A+STCLNLL++SG++DLARKLL+ +K L L+PN
Sbjct: 139 HEKVMEMFNLILMIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKNHLGLQPN 194
>ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g18475 gi|110737103|dbj|BAF00503.1| hypothetical
protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 197 bits (501), Expect = 3e-48
Identities = 94/176 (53%), Positives = 131/176 (74%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
W+SP+ + + KP PP E++ + K KFI+HESAVS++K ERDPQ L+IFN
Sbjct: 21 WVSPICFSEK-KKKPSPPPESSISPVETNPKTKFISHESAVSLMKRERDPQGVLDIFNKA 79
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
++Q+GFNHN++TYS++L L + KKF AVDAIL QM +E C+F E LFLNLM HFS++
Sbjct: 80 SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDL 139
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
H++ ++MF IQ I R KPSL A+STCLNLL++SG+++L+RKLL+ +K L L+PN
Sbjct: 140 HDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPN 195
>ref|XP_006287559.1| hypothetical protein CARUB_v10000770mg [Capsella rubella]
gi|565459122|ref|XP_006287560.1| hypothetical protein
CARUB_v10000770mg [Capsella rubella]
gi|482556265|gb|EOA20457.1| hypothetical protein
CARUB_v10000770mg [Capsella rubella]
gi|482556266|gb|EOA20458.1| hypothetical protein
CARUB_v10000770mg [Capsella rubella]
Length = 506
Score = 189 bits (481), Expect = 6e-46
Identities = 89/176 (50%), Positives = 129/176 (73%)
Frame = -2
Query: 528 WISPLHYIKPVSPKPDPPVETTSVLQQPKRKPKFITHESAVSMIKGERDPQHALEIFNMV 349
W+SP+ + + KP+ P E++ + K KFI+H SA+ +++ ERDPQ +L+IFN
Sbjct: 21 WVSPICFSDKMK-KPNSPPESSISPLETNPKTKFISHASAIELMRRERDPQRSLDIFNRA 79
Query: 348 TEQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFEACKFHEGLFLNLMSHFSKASH 169
++Q+GFNHN++TYS++L L + KKF AVDAIL QM +E C+F E LFLNLM HFS+
Sbjct: 80 SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMRYETCRFEESLFLNLMRHFSRFDL 139
Query: 168 HERTLDMFFAIQPIVREKPSLKAVSTCLNLLVESGQLDLARKLLVESKRRLDLKPN 1
H++ +DMF IQ I R KPSLK++STCLNLL+++G+++LAR LL+ +K L L+PN
Sbjct: 140 HDKVMDMFNLIQVIARVKPSLKSISTCLNLLIDAGEINLARNLLLYAKHNLGLQPN 195