BLASTX nr result
ID: Cocculus22_contig00000298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00000298
(287 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin... 117 2e-24
emb|CBI35338.3| unnamed protein product [Vitis vinifera] 117 2e-24
ref|XP_004297695.1| PREDICTED: katanin p80 WD40 repeat-containin... 103 2e-20
ref|XP_006468674.1| PREDICTED: katanin p80 WD40 repeat-containin... 101 9e-20
ref|XP_006468673.1| PREDICTED: katanin p80 WD40 repeat-containin... 101 9e-20
ref|XP_006468672.1| PREDICTED: katanin p80 WD40 repeat-containin... 101 9e-20
ref|XP_007221941.1| hypothetical protein PRUPE_ppa001553mg [Prun... 101 9e-20
ref|XP_006448506.1| hypothetical protein CICLE_v10014294mg [Citr... 100 4e-19
ref|XP_007043149.1| Transducin/WD40 repeat-like superfamily prot... 100 4e-19
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu... 89 5e-16
ref|XP_006361541.1| PREDICTED: katanin p80 WD40 repeat-containin... 86 5e-15
emb|CAN79088.1| hypothetical protein VITISV_026858 [Vitis vinifera] 86 7e-15
ref|XP_006603797.1| PREDICTED: katanin p80 WD40 repeat-containin... 80 2e-13
ref|XP_004231535.1| PREDICTED: katanin p80 WD40 repeat-containin... 80 2e-13
ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containin... 78 1e-12
ref|XP_004489186.1| PREDICTED: katanin p80 WD40 repeat-containin... 78 1e-12
ref|XP_004489185.1| PREDICTED: katanin p80 WD40 repeat-containin... 78 1e-12
ref|XP_007150863.1| hypothetical protein PHAVU_004G000600g [Phas... 77 3e-12
ref|XP_002874130.1| transducin family protein [Arabidopsis lyrat... 76 4e-12
ref|XP_003525689.2| PREDICTED: katanin p80 WD40 repeat-containin... 76 5e-12
>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Vitis vinifera]
Length = 800
Score = 117 bits (292), Expect = 2e-24
Identities = 62/90 (68%), Positives = 70/90 (77%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+SKSSS+ NLS LT+N+ K SLGRLSIS N++ I KETK LGRLSVSQNS+P KE K L
Sbjct: 317 ESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRLSVSQNSDPVDKETKCL 376
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
STGSVPGTPQRV LN GPK+T S AP
Sbjct: 377 ASTGSVPGTPQRVNLNTGPKTTLASSTTAP 406
>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
Length = 989
Score = 117 bits (292), Expect = 2e-24
Identities = 62/90 (68%), Positives = 70/90 (77%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+SKSSS+ NLS LT+N+ K SLGRLSIS N++ I KETK LGRLSVSQNS+P KE K L
Sbjct: 317 ESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRLSVSQNSDPVDKETKCL 376
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
STGSVPGTPQRV LN GPK+T S AP
Sbjct: 377 ASTGSVPGTPQRVNLNTGPKTTLASSTTAP 406
>ref|XP_004297695.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Fragaria vesca subsp. vesca]
Length = 795
Score = 103 bits (257), Expect = 2e-20
Identities = 53/90 (58%), Positives = 67/90 (74%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+SK + NLS L +N+ ++SLGRLS+S +SD + KETK LGRLSVSQNS+P KE K L
Sbjct: 317 ESKHLAGGNLSVLHENAARSSLGRLSVSQSSDSLVKETKSLGRLSVSQNSDP-AKEPKSL 375
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
TSTGSVPGTPQR+ LN+ PK+ S + P
Sbjct: 376 TSTGSVPGTPQRISLNSSPKAIVSSSVSVP 405
>ref|XP_006468674.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X3 [Citrus sinensis]
Length = 811
Score = 101 bits (252), Expect = 9e-20
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 18/100 (18%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTV------ 178
+SKSS++ NLS L +NS K SLG+LS+S NSDP+ KETK LGRLSVSQNS+P +
Sbjct: 317 ESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 376
Query: 179 ------------KEAKPLTSTGSVPGTPQRVGLNNGPKST 262
KE+K L+STGSVPGTPQRV LN G K++
Sbjct: 377 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTS 416
>ref|XP_006468673.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X2 [Citrus sinensis]
Length = 818
Score = 101 bits (252), Expect = 9e-20
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 18/100 (18%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTV------ 178
+SKSS++ NLS L +NS K SLG+LS+S NSDP+ KETK LGRLSVSQNS+P +
Sbjct: 317 ESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 376
Query: 179 ------------KEAKPLTSTGSVPGTPQRVGLNNGPKST 262
KE+K L+STGSVPGTPQRV LN G K++
Sbjct: 377 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTS 416
>ref|XP_006468672.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X1 [Citrus sinensis]
Length = 819
Score = 101 bits (252), Expect = 9e-20
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 18/100 (18%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTV------ 178
+SKSS++ NLS L +NS K SLG+LS+S NSDP+ KETK LGRLSVSQNS+P +
Sbjct: 317 ESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 376
Query: 179 ------------KEAKPLTSTGSVPGTPQRVGLNNGPKST 262
KE+K L+STGSVPGTPQRV LN G K++
Sbjct: 377 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTS 416
>ref|XP_007221941.1| hypothetical protein PRUPE_ppa001553mg [Prunus persica]
gi|462418877|gb|EMJ23140.1| hypothetical protein
PRUPE_ppa001553mg [Prunus persica]
Length = 803
Score = 101 bits (252), Expect = 9e-20
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+SK S NLS L +N+ K SLGRLS+S SD + KETK LGRLSVSQNS+PT KE K +
Sbjct: 317 ESKPLSGGNLSLLNENAAK-SLGRLSVSQCSDSLVKETKSLGRLSVSQNSDPT-KEPKVI 374
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
STG+VPGTPQR+ LN+ PK+ A S AA P
Sbjct: 375 ASTGNVPGTPQRINLNSSPKTIAASSAAVP 404
>ref|XP_006448506.1| hypothetical protein CICLE_v10014294mg [Citrus clementina]
gi|557551117|gb|ESR61746.1| hypothetical protein
CICLE_v10014294mg [Citrus clementina]
Length = 818
Score = 99.8 bits (247), Expect = 4e-19
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 18/100 (18%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTV------ 178
+SKSS++ NLS L +NS K SLG+LS+S NSDP+ KETK LGRLSVSQNS+P +
Sbjct: 317 ESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 376
Query: 179 ------------KEAKPLTSTGSVPGTPQRVGLNNGPKST 262
KE+K L+S GSVPGTPQRV LN G K++
Sbjct: 377 GRLSVSQNSEPAKESKVLSSAGSVPGTPQRVNLNMGSKTS 416
>ref|XP_007043149.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508707084|gb|EOX98980.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1199
Score = 99.8 bits (247), Expect = 4e-19
Identities = 53/90 (58%), Positives = 65/90 (72%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+ KSSS +LS L +N+ K S+GRLS+S N DP+ KETK LGRLSVSQNS+P KE+K L
Sbjct: 317 EPKSSSGGSLSVLNENTTKASMGRLSVSQNPDPLMKETKSLGRLSVSQNSDP-AKESKNL 375
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
STG+VPGTPQRV LN K+T + P
Sbjct: 376 ASTGNVPGTPQRVNLNIASKTTQPNSVTVP 405
>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
gi|223547170|gb|EEF48666.1| katanin P80 subunit,
putative [Ricinus communis]
Length = 803
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEP---TVKEA 187
+SKS +AN S L D++ K SLGRLS + NS+ + KETK GRLSVSQN++P + KE+
Sbjct: 313 ESKSGISANQSVLLDSTAKTSLGRLSAAQNSEILVKETKSFGRLSVSQNTDPVKESTKES 372
Query: 188 KPLTSTGSVPGTPQRVGLNNGPKST 262
K L STG+VPGTPQRV N K+T
Sbjct: 373 KILASTGNVPGTPQRVNFNTALKTT 397
>ref|XP_006361541.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Solanum tuberosum]
Length = 798
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/90 (51%), Positives = 64/90 (71%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
D KS+S+ NLS L +++ K +LGRLSIS NSDP+ KETK GRLSVSQN + ++++ L
Sbjct: 318 DVKSNSSVNLSNLVEDASKANLGRLSISQNSDPV-KETKSFGRLSVSQNLDQ--RDSRAL 374
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
T+T + PGTPQR+ L+ G K+ + A P
Sbjct: 375 TTTANAPGTPQRINLSVGSKAAPINTTAVP 404
>emb|CAN79088.1| hypothetical protein VITISV_026858 [Vitis vinifera]
Length = 570
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +2
Query: 83 GRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTGSVPGTPQRVGLNNGPKST 262
G+LSIS N++P ETK LGRLSVSQNS+P ++AK L S GSVP TPQRV LN GPK+T
Sbjct: 359 GKLSISQNTEPSMNETKSLGRLSVSQNSDPVDEKAKCLASIGSVPNTPQRVNLNTGPKTT 418
Query: 263 AGSLAAAP 286
S AP
Sbjct: 419 LASSTTAP 426
>ref|XP_006603797.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Glycine max]
Length = 759
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = +2
Query: 29 SSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTG 208
SS+ N++ L + + K RLS+S N D + KET+ LGRLSVSQ+S+P +KE K L STG
Sbjct: 320 SSSGNMTVLNEITAK---ARLSVSQNPDQLLKETRSLGRLSVSQDSDP-LKEGKCLASTG 375
Query: 209 SVPGTPQRVGLNNGPKSTAG 268
S P TPQR+ LN+GPK+ G
Sbjct: 376 SAPSTPQRINLNSGPKTVPG 395
>ref|XP_004231535.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Solanum lycopersicum]
Length = 798
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/90 (48%), Positives = 62/90 (68%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
D KS+S+ LS L +++ K +LGRLSIS +SDP+ KETK GRLSVSQN + ++++ L
Sbjct: 318 DVKSNSSMKLSNLAEDASKANLGRLSISQDSDPV-KETKSFGRLSVSQNLDQ--RDSRAL 374
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
+T S PGTPQR+ L+ G K+ + A P
Sbjct: 375 ATTASAPGTPQRINLSVGSKAAPINTTAVP 404
>ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Cucumis sativus] gi|449524677|ref|XP_004169348.1|
PREDICTED: katanin p80 WD40 repeat-containing subunit B1
homolog [Cucumis sativus]
Length = 795
Score = 78.2 bits (191), Expect = 1e-12
Identities = 45/90 (50%), Positives = 58/90 (64%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPL 196
+ KSSS+ +N+ K S G LS+S SD + KETK LGRLSVSQNS+ K+ K L
Sbjct: 317 EPKSSSHLQ----NENNTKTSFGGLSVSQTSDALLKETKTLGRLSVSQNSD-VAKDPKSL 371
Query: 197 TSTGSVPGTPQRVGLNNGPKSTAGSLAAAP 286
+STG+ P TPQ++ LN G K+ S AA P
Sbjct: 372 SSTGNGPSTPQKINLNAGSKTNLVSSAAVP 401
>ref|XP_004489186.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X2 [Cicer arietinum]
Length = 746
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 29 SSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTG 208
SS N + L + + K RLS+S N DP+ KET+ LGRLSVSQ+S+P +KE K L STG
Sbjct: 320 SSTGNTTVLNEITTK---ARLSVSQNPDPLLKETRSLGRLSVSQDSDP-LKEGKYLASTG 375
Query: 209 SVPGTPQRVGLNNGPKSTAG 268
S P TPQR+ LN+G ++ +G
Sbjct: 376 SAPSTPQRINLNSGSRTVSG 395
>ref|XP_004489185.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X1 [Cicer arietinum]
Length = 747
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 29 SSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTG 208
SS N + L + + K RLS+S N DP+ KET+ LGRLSVSQ+S+P +KE K L STG
Sbjct: 320 SSTGNTTVLNEITTK---ARLSVSQNPDPLLKETRSLGRLSVSQDSDP-LKEGKYLASTG 375
Query: 209 SVPGTPQRVGLNNGPKSTAG 268
S P TPQR+ LN+G ++ +G
Sbjct: 376 SAPSTPQRINLNSGSRTVSG 395
>ref|XP_007150863.1| hypothetical protein PHAVU_004G000600g [Phaseolus vulgaris]
gi|593700893|ref|XP_007150864.1| hypothetical protein
PHAVU_004G000600g [Phaseolus vulgaris]
gi|561024172|gb|ESW22857.1| hypothetical protein
PHAVU_004G000600g [Phaseolus vulgaris]
gi|561024173|gb|ESW22858.1| hypothetical protein
PHAVU_004G000600g [Phaseolus vulgaris]
Length = 759
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +2
Query: 29 SSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTG 208
SS N++ L + + K RLS+S N D + KET+ LGRLSVS +KE K L STG
Sbjct: 320 SSGGNMTVLNEITAK---ARLSVSQNPDQLLKETRSLGRLSVSSQDSDPLKEGKCLPSTG 376
Query: 209 SVPGTPQRVGLNNGPKSTAG 268
S P TPQR+ LN+GPK+ G
Sbjct: 377 SAPSTPQRINLNSGPKTVTG 396
>ref|XP_002874130.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319967|gb|EFH50389.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 837
Score = 76.3 bits (186), Expect = 4e-12
Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 37/121 (30%)
Frame = +2
Query: 17 DSKSSSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAK-- 190
+ +S S + L DN+ K LG+LS+S N DP+ KETK LGRLSVSQNS+P+ KE K
Sbjct: 317 EKRSCSGRDSVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRLSVSQNSDPSTKETKSI 376
Query: 191 -----------------------------------PLTSTGSVPGTPQRVGLNNGPKSTA 265
L+STGS+PGTP RV N K+T+
Sbjct: 377 GRSSTSQNSDSSMKESKPLGRLSVSQNSDVSKDSRTLSSTGSLPGTPHRVSSTNVSKATS 436
Query: 266 G 268
G
Sbjct: 437 G 437
>ref|XP_003525689.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Glycine max]
Length = 759
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 29 SSNANLSGLTDNSGKNSLGRLSISTNSDPIAKETKPLGRLSVSQNSEPTVKEAKPLTSTG 208
SS+ N++ L + + K RLS+S N D + KE + LGRLSVSQ+S+ ++KE K L STG
Sbjct: 320 SSSGNMTVLNEITAK---ARLSVSQNPDQLLKEIRSLGRLSVSQDSD-SLKEGKCLASTG 375
Query: 209 SVPGTPQRVGLNNGPKSTAG 268
S P TPQR+ LN+GPK+ G
Sbjct: 376 SAPSTPQRINLNSGPKAVPG 395