BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000216
         (875 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [A...   184   5e-44
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I...   183   9e-44
ref|XP_007143369.1| hypothetical protein PHAVU_007G066800g [Phas...   181   3e-43
ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, I...   180   7e-43
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ...   179   1e-42
ref|XP_007038605.1| DNA-directed RNA polymerase II subunit prote...   178   2e-42
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   178   2e-42
ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, ...   178   3e-42
ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citr...   178   3e-42
gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   178   3e-42
gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus...   177   4e-42
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun...   177   4e-42
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu...   177   5e-42
ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, I...   177   5e-42
ref|NP_001149930.1| LOC100283558 [Zea mays] gi|195635557|gb|ACG3...   177   5e-42
gb|ACG24540.1| DNA-directed RNA polymerases I, II, and III 14.4 ...   177   5e-42
gb|ACF83139.1| unknown [Zea mays] gi|414871592|tpg|DAA50149.1| T...   177   5e-42
ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III ...   177   6e-42
ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I...   176   8e-42
ref|XP_007204747.1| hypothetical protein PRUPE_ppa013037mg [Prun...   176   8e-42

>ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [Amborella trichopoda]
           gi|548861988|gb|ERN19353.1| hypothetical protein
           AMTR_s00069p00112860 [Amborella trichopoda]
          Length = 144

 Score =  184 bits (466), Expect = 5e-44
 Identities = 99/144 (68%), Positives = 100/144 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNEMDMGY                         A                   RK
Sbjct: 1   MADDDYNEMDMGYEEEPPEPELEEGAEEEVENNEEDPDAFVGPEPETKEDEEPRTDRPRK 60

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGGD 144


>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
           unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  183 bits (464), Expect = 9e-44
 Identities = 99/144 (68%), Positives = 101/144 (70%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYN+MDMGY                       DI D                   K
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAIETAEKEQVPVERSR---K 57

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 58  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 117

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 118 GSYEDWGVDELIVEDSWKRQVGGD 141


>ref|XP_007143369.1| hypothetical protein PHAVU_007G066800g [Phaseolus vulgaris]
           gi|561016559|gb|ESW15363.1| hypothetical protein
           PHAVU_007G066800g [Phaseolus vulgaris]
          Length = 142

 Score =  181 bits (459), Expect = 3e-43
 Identities = 96/144 (66%), Positives = 100/144 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MAD+DY++MDMGY                          DP                  K
Sbjct: 1   MADEDYDDMDMGYEHEPPEPEIEEGAEEDLENKNEELTGDPIDTEDKEEEQQGERPR--K 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Setaria italica]
          Length = 143

 Score =  180 bits (456), Expect = 7e-43
 Identities = 98/144 (68%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNEMDMGY                          D                  RK
Sbjct: 1   MADDDYNEMDMGYEDEPPEPEIEEGAEEELENNNEDT-PDDVVGAEGEEKEQEKAKSERK 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Glycine max]
          Length = 142

 Score =  179 bits (454), Expect = 1e-42
 Identities = 95/144 (65%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDY ++DMGY                          +P                  K
Sbjct: 1   MADDDYEDIDMGYEDEPPEPEIEEGAEEDLENKNDELTGEPIDTEDKEEEQPVERPR--K 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_007038605.1| DNA-directed RNA polymerase II subunit protein isoform 1 [Theobroma
           cacao] gi|508775850|gb|EOY23106.1| DNA-directed RNA
           polymerase II subunit protein isoform 1 [Theobroma
           cacao]
          Length = 143

 Score =  178 bits (452), Expect = 2e-42
 Identities = 97/145 (66%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDI-ADPXXXXXXXXXXXXXXXXXR 602
           MADDDYN+MDMGY                       D+  +P                  
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEDLENNNNDDVPVEPIETEEKEEHDSKDKIR-- 58

Query: 601 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 422
           KTSKYMTKYERARILGTRALQISMNAPVMVELEGE+DPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59  KTSKYMTKYERARILGTRALQISMNAPVMVELEGESDPLEIAMKELRERKIPFTIRRYLP 118

Query: 421 DGSYEDWGVDELIVEDTWKRQVGGD 347
           DGSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  178 bits (452), Expect = 2e-42
 Identities = 96/144 (66%), Positives = 102/144 (70%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MAD++YN++DMGY                       D+  P                 RK
Sbjct: 1   MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDV--PDALEEQEKEVHETVERPRK 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Oryza brachyantha]
          Length = 143

 Score =  178 bits (451), Expect = 3e-42
 Identities = 96/143 (67%), Positives = 99/143 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYN+MDMGY                        + D                  RK
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAELEPENNNEDAV-DDVVGAEVDDKEQEKTARPRK 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGG 350
           GSYEDWGVDELIVED+WKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citrus clementina]
           gi|568874475|ref|XP_006490341.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 6A-like [Citrus
           sinensis] gi|557523738|gb|ESR35105.1| hypothetical
           protein CICLE_v10006171mg [Citrus clementina]
          Length = 143

 Score =  178 bits (451), Expect = 3e-42
 Identities = 97/144 (67%), Positives = 102/144 (70%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MAD+DYN++DMGY                       DI +                  RK
Sbjct: 1   MADEDYNDLDMGYEDEPPEPEIEEGAEEDAENINNDDI-NGEPIETEEKEEQEQKEAARK 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGGD 143


>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  178 bits (451), Expect = 3e-42
 Identities = 98/143 (68%), Positives = 100/143 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDY +MD GY                       DI DP                 RK
Sbjct: 1   MADDDY-DMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRK 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGG 350
           GSYEDWGVDELIVED+WKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142


>gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus guttatus]
          Length = 143

 Score =  177 bits (450), Expect = 4e-42
 Identities = 97/144 (67%), Positives = 101/144 (70%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MAD+DY EMD GY                       D+ DP                 RK
Sbjct: 1   MADEDY-EMDGGYEDEPMEPELDEGVEVEEDNENPDDVPDPIEGDGEEKQEQEPVERPRK 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGG+
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGGN 143


>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
           notabilis]
          Length = 143

 Score =  177 bits (450), Expect = 4e-42
 Identities = 97/144 (67%), Positives = 98/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDY EMDMGY                       D                      K
Sbjct: 1   MADDDYTEMDMGYEDEPPEPEIEEGAEEDVDNNNNDDTGGEPIEAEDKADEEPVEHPR-K 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
           gi|550327061|gb|EEE96460.2| hypothetical protein
           POPTR_0012s13610g [Populus trichocarpa]
          Length = 183

 Score =  177 bits (449), Expect = 5e-42
 Identities = 100/156 (64%), Positives = 107/156 (68%), Gaps = 3/156 (1%)
 Frame = -2

Query: 805 RKKLSDL---TIMADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXX 635
           R+KLS L   +IMAD+DYN++DMGY                       D           
Sbjct: 29  REKLSFLLQESIMADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDK 88

Query: 634 XXXXXXXXXXRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 455
                      KTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 89  EEQEPVERPR-KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 147

Query: 454 KIPFTIRRYLPDGSYEDWGVDELIVEDTWKRQVGGD 347
           KIPFTIRRYLPDGSYEDWGVDELIVED+WKRQVGGD
Sbjct: 148 KIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 183


>ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Cucumis sativus]
          Length = 142

 Score =  177 bits (449), Expect = 5e-42
 Identities = 94/143 (65%), Positives = 99/143 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYN++DMGY                          +P                  K
Sbjct: 1   MADDDYNDLDMGYEDEPPEPEIEEGAEEELDTNTDDVPGEPVEAEGKEDEEPVERVR--K 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGG 350
           GSYEDWGVDELIVED+WKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141


>ref|NP_001149930.1| LOC100283558 [Zea mays] gi|195635557|gb|ACG37247.1| DNA-directed
           RNA polymerases I, II, and III 14.4 kDa polypeptide [Zea
           mays]
          Length = 142

 Score =  177 bits (449), Expect = 5e-42
 Identities = 96/144 (66%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNE+DMGY                          D                  RK
Sbjct: 1   MADDDYNEIDMGYEDELPEPEIEEGAEEELENNEDAP--DDVIGGEGEDKEQEKTKRERK 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           T+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 59  TTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>gb|ACG24540.1| DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
           [Zea mays] gi|195606438|gb|ACG25049.1| DNA-directed RNA
           polymerases I, II, and III 14.4 kDa polypeptide [Zea
           mays] gi|195616336|gb|ACG29998.1| DNA-directed RNA
           polymerases I, II, and III 14.4 kDa polypeptide [Zea
           mays] gi|413933719|gb|AFW68270.1| DNA-directed RNA
           polymerase I, II, and III polypeptide [Zea mays]
          Length = 142

 Score =  177 bits (449), Expect = 5e-42
 Identities = 96/144 (66%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNE+DMGY                          D                  RK
Sbjct: 1   MADDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAP--DDVIGGEGEDKEQEKTKRERK 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           T+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 59  TTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>gb|ACF83139.1| unknown [Zea mays] gi|414871592|tpg|DAA50149.1| TPA: DNA-directed
           RNA polymerase I, II, and III polypeptide isoform 1 [Zea
           mays] gi|414871593|tpg|DAA50150.1| TPA: DNA-directed RNA
           polymerase I, II, and III polypeptide isoform 2 [Zea
           mays]
          Length = 142

 Score =  177 bits (449), Expect = 5e-42
 Identities = 96/144 (66%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNE+DMGY                          D                  RK
Sbjct: 1   MADDDYNEIDMGYEDEPPEPEIEEGAEEELENNEDAP--DDVIGGEGEDKEQEKTKRERK 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           T+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 59  TTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Medicago truncatula] gi|124360124|gb|ABN08140.1|
           DNA-directed RNA polymerase, 14 to 18 kDa subunit
           [Medicago truncatula] gi|355500206|gb|AES81409.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Medicago truncatula] gi|388508874|gb|AFK42503.1|
           unknown [Medicago truncatula]
           gi|388517849|gb|AFK46986.1| unknown [Medicago
           truncatula]
          Length = 145

 Score =  177 bits (448), Expect = 6e-42
 Identities = 96/145 (66%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDI-ADPXXXXXXXXXXXXXXXXXR 602
           MADDDY ++DMGY                       D+ A+                  R
Sbjct: 1   MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDAAPVERPR 60

Query: 601 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 422
           +TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 61  RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120

Query: 421 DGSYEDWGVDELIVEDTWKRQVGGD 347
           DGSYEDWGVDELIVED+WKRQVGGD
Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145


>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Fragaria vesca subsp. vesca]
          Length = 142

 Score =  176 bits (447), Expect = 8e-42
 Identities = 94/144 (65%), Positives = 99/144 (68%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MADDDYNEMD+GY                          D                   K
Sbjct: 1   MADDDYNEMDIGYEDEPVEPEMEEGAEEEDLDNNDDMAGDAIETDDKEEQAPVERPR--K 58

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGG+
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGGN 142


>ref|XP_007204747.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
           gi|462400278|gb|EMJ05946.1| hypothetical protein
           PRUPE_ppa013037mg [Prunus persica]
          Length = 143

 Score =  176 bits (447), Expect = 8e-42
 Identities = 95/144 (65%), Positives = 100/144 (69%)
 Frame = -2

Query: 778 MADDDYNEMDMGYXXXXXXXXXXXXXXXXXXXXXXXDIADPXXXXXXXXXXXXXXXXXRK 599
           MAD+DYN+MDMGY                       D+                     K
Sbjct: 1   MADEDYNDMDMGYEDEPPEPEIEEGAEEDVDNINNDDLPGDAIEAEDKEEQAQVEGPR-K 59

Query: 598 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 419
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 418 GSYEDWGVDELIVEDTWKRQVGGD 347
           GSYEDWGVDELIVED+WKRQVGGD
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGGD 143