BLASTX nr result
ID: Cocculus22_contig00000130
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00000130
(605 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote... 100 2e-19
ref|XP_007044927.1| Photosystem II core complex proteins psbY [T... 93 5e-17
ref|XP_002315645.1| Photosystem II core complex proteins psbY [P... 87 3e-15
ref|XP_002312650.1| Photosystem II core complex proteins psbY [P... 87 5e-15
gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides] 87 5e-15
ref|XP_002515034.1| photosystem II core complex proteins psbY, c... 83 7e-14
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides] 83 7e-14
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides] 83 7e-14
ref|XP_007223492.1| hypothetical protein PRUPE_ppa011725mg [Prun... 82 2e-13
ref|XP_006484003.1| PREDICTED: photosystem II core complex prote... 80 3e-13
ref|XP_006438168.1| hypothetical protein CICLE_v10032789mg [Citr... 80 3e-13
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote... 79 1e-12
gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides] 78 2e-12
gb|EXB82456.1| Photosystem II core complex proteins psbY [Morus ... 75 2e-11
ref|XP_004249106.1| PREDICTED: photosystem II core complex prote... 75 2e-11
gb|AFK46434.1| unknown [Lotus japonicus] 72 1e-10
ref|XP_006364767.1| PREDICTED: photosystem II core complex prote... 71 2e-10
ref|XP_003538579.1| PREDICTED: photosystem II core complex prote... 71 3e-10
ref|XP_004310006.1| PREDICTED: photosystem II core complex prote... 69 1e-09
gb|AFK39275.1| unknown [Medicago truncatula] gi|388509102|gb|AFK... 67 4e-09
>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Vitis vinifera]
Length = 201
Score = 100 bits (250), Expect = 2e-19
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS NS P LN SKP KPIS+LS+QNLPK LT + K S + N + LAGT +AG
Sbjct: 11 LNAKCLSINS-PKNLNLSKPTAKPISLLSIQNLPKGLT-TLKSSENQNLSTSLAGTAIAG 68
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIFSTLSSCDPA+AAQQIAEI
Sbjct: 69 AIFSTLSSCDPALAAQQIAEI 89
>ref|XP_007044927.1| Photosystem II core complex proteins psbY [Theobroma cacao]
gi|508708862|gb|EOY00759.1| Photosystem II core complex
proteins psbY [Theobroma cacao]
Length = 201
Score = 93.2 bits (230), Expect = 5e-17
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLT--KSSKHSVDPNSLSLLAGTTV 536
LNAKCLS +S+ T +N +KP KPIS+LS+QNLPK LT K ++ S+ P+SL AGT +
Sbjct: 11 LNAKCLSISSNKT-INPTKPSAKPISLLSMQNLPKGLTISKPAEKSILPSSL---AGTAI 66
Query: 537 AGAIFSTLSSCDPAMAAQQIAEI 605
AGA+FSTLSSC+PA AAQQIAEI
Sbjct: 67 AGAVFSTLSSCNPAFAAQQIAEI 89
>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222864685|gb|EEF01816.1|
Photosystem II core complex proteins psbY [Populus
trichocarpa]
Length = 196
Score = 87.4 bits (215), Expect = 3e-15
Identities = 48/81 (59%), Positives = 60/81 (74%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS NS+ ++ +KP KP+S+LS+QNLPK LT S P ++L GT +AG
Sbjct: 11 LNAKCLSINSNKN-ISPTKPSTKPVSLLSMQNLPKGLTISK-----PADNTVLTGTAIAG 64
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+TLSSC+PA AAQQIAEI
Sbjct: 65 AIFTTLSSCEPAFAAQQIAEI 85
>ref|XP_002312650.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
gi|222852470|gb|EEE90017.1| Photosystem II core complex
proteins psbY [Populus trichocarpa]
Length = 192
Score = 86.7 bits (213), Expect = 5e-15
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS N++ N KPP KPI +L++QNLPK LT S P + LAGT +AG
Sbjct: 8 LNAKCLSINANKNT-NPIKPPTKPIYLLAMQNLPKGLTISK-----PADNTALAGTAIAG 61
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+TLSSC+PA AAQQIAEI
Sbjct: 62 AIFTTLSSCEPAFAAQQIAEI 82
>gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 192
Score = 86.7 bits (213), Expect = 5e-15
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS N++ N KPP KPI +L++QNLPK LT S P + LAGT +AG
Sbjct: 8 LNAKCLSINANKNT-NPIKPPTKPIYLLAMQNLPKGLTISK-----PADNTALAGTAIAG 61
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+TLSSC+PA AAQQIAEI
Sbjct: 62 AIFTTLSSCEPAFAAQQIAEI 82
>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
[Ricinus communis] gi|223546085|gb|EEF47588.1|
photosystem II core complex proteins psbY, chloroplast
precursor [Ricinus communis]
Length = 195
Score = 82.8 bits (203), Expect = 7e-14
Identities = 51/82 (62%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPI-KPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVA 539
LN KCLS+ +S +N KP KPIS+LS+Q LPK LT S N LLAGT +A
Sbjct: 7 LNTKCLSNINSGKNIN--KPTTTKPISLLSMQELPKGLTISKP----TNENKLLAGTAIA 60
Query: 540 GAIFSTLSSCDPAMAAQQIAEI 605
GAIFSTLSSCDPA AAQQIAEI
Sbjct: 61 GAIFSTLSSCDPAFAAQQIAEI 82
>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 82.8 bits (203), Expect = 7e-14
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS NS ++ KP KP+S+LS+ NLPK LT S P ++L GT +AG
Sbjct: 11 LNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISK-----PADNTVLTGTAIAG 64
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+TLSSC+PA AAQQIAEI
Sbjct: 65 AIFTTLSSCEPAFAAQQIAEI 85
>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 82.8 bits (203), Expect = 7e-14
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS NS ++ KP KP+S+LS+ NLPK LT S P ++L GT +AG
Sbjct: 11 LNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISK-----PADNTVLTGTAIAG 64
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+TLSSC+PA AAQQIAEI
Sbjct: 65 AIFTTLSSCEPAFAAQQIAEI 85
>ref|XP_007223492.1| hypothetical protein PRUPE_ppa011725mg [Prunus persica]
gi|462420428|gb|EMJ24691.1| hypothetical protein
PRUPE_ppa011725mg [Prunus persica]
Length = 199
Score = 81.6 bits (200), Expect = 2e-13
Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 363 LNAKCLSSNSSP--TKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTV 536
+NAKC+S+N+ TKL T KP +LSLQNLPK LT S + ++S LA T +
Sbjct: 11 INAKCMSTNTPKVVTKLTT-----KPTFLLSLQNLPKGLTSSKPVEIPSINMSPLASTAI 65
Query: 537 AGAIFSTLSSCDPAMAAQQIAEI 605
AGAIFSTLSS DPAMAAQQIA+I
Sbjct: 66 AGAIFSTLSSSDPAMAAQQIAQI 88
>ref|XP_006484003.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Citrus sinensis]
Length = 200
Score = 80.5 bits (197), Expect = 3e-13
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKC S +S + + KP S LS+QNLPK LT SSK + +S SL AGT +AG
Sbjct: 11 LNAKCFSISSPKSSIKPGAT--KPTSPLSMQNLPKGLTVSSKPT---DSSSLAAGTAIAG 65
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIFSTLSSCD A AAQQIAEI
Sbjct: 66 AIFSTLSSCDAAFAAQQIAEI 86
>ref|XP_006438168.1| hypothetical protein CICLE_v10032789mg [Citrus clementina]
gi|557540364|gb|ESR51408.1| hypothetical protein
CICLE_v10032789mg [Citrus clementina]
Length = 200
Score = 80.5 bits (197), Expect = 3e-13
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKC S +S + + KP S LS+QNLPK LT SSK + +S SL AGT +AG
Sbjct: 11 LNAKCFSISSPKSSIKPGTT--KPTSPLSMQNLPKGLTVSSKPT---DSSSLAAGTAIAG 65
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIFSTLSSCD A AAQQIAEI
Sbjct: 66 AIFSTLSSCDAAFAAQQIAEI 86
>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Cucumis sativus]
gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
II core complex proteins psbY, chloroplastic-like
[Cucumis sativus]
Length = 253
Score = 79.0 bits (193), Expect = 1e-12
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
L+ KC S NS+ T NT K KPIS+LSLQNLPK L SSK + + N + L+ T +AG
Sbjct: 62 LSVKCTSINSTKTH-NTQKIIPKPISLLSLQNLPKGLI-SSKSNQNSNLSTFLSSTAIAG 119
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
A+F+TL S DPA AAQQIAEI
Sbjct: 120 AVFATLGSSDPAFAAQQIAEI 140
>gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 192
Score = 77.8 bits (190), Expect = 2e-12
Identities = 46/81 (56%), Positives = 55/81 (67%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTVAG 542
LNAKCLS N++ N KPP KPI +L++QNL K LT S P + LAGT +AG
Sbjct: 8 LNAKCLSINANKNT-NPIKPPTKPIYLLAMQNLTKGLTISK-----PADNTALAGTAIAG 61
Query: 543 AIFSTLSSCDPAMAAQQIAEI 605
AIF+ LSS +PA AAQQIAEI
Sbjct: 62 AIFTALSSSEPAFAAQQIAEI 82
>gb|EXB82456.1| Photosystem II core complex proteins psbY [Morus notabilis]
Length = 199
Score = 74.7 bits (182), Expect = 2e-11
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +3
Query: 363 LNAKCLSSNSSPT---KLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTT 533
LNAKC+++N+ ++TSK P S+LSLQNLPK LT S LAG
Sbjct: 12 LNAKCIATNTPKNIKPVISTSK---LPSSLLSLQNLPKGLTSSPS----------LAGAA 58
Query: 534 VAGAIFSTLSSCDPAMAAQQIAEI 605
+AGA+FSTLS+CDPAMAAQQIAEI
Sbjct: 59 LAGAVFSTLSACDPAMAAQQIAEI 82
>ref|XP_004249106.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Solanum lycopersicum]
Length = 194
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSL-LAGTTVA 539
LNAKC + S N SKP KPIS+LS+ NLPK L S P++LS+ L GT +A
Sbjct: 11 LNAKCFTKASIN---NPSKP--KPISLLSIHNLPKGLLTSK-----PSNLSIPLTGTAIA 60
Query: 540 GAIFSTLSSCDPAMAAQQIAEI 605
GA+FSTLSSCD A AAQQIAE+
Sbjct: 61 GAVFSTLSSCDSAFAAQQIAEL 82
>gb|AFK46434.1| unknown [Lotus japonicus]
Length = 205
Score = 72.0 bits (175), Expect = 1e-10
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Frame = +3
Query: 363 LNAKCLSS----NSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGT 530
+N+KCL++ N + TKL TSKP I S QNLPK L+ + S+ S+ AGT
Sbjct: 12 INSKCLNTKLMINPTNTKLTTSKPTI------SFQNLPKGLSSAENTSISTTSM---AGT 62
Query: 531 TVAGAIFSTLSSCDPAMAAQQIAEI 605
+AGAIFS+L SCD A AAQQIAEI
Sbjct: 63 AIAGAIFSSLVSCDAAFAAQQIAEI 87
>ref|XP_006364767.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Solanum tuberosum]
Length = 195
Score = 71.2 bits (173), Expect = 2e-10
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNLPKVLTKSSKHSVDPNSLSL-LAGTTVA 539
LNAKC + S N SKP KP+S+LS+ NLPK L S S +LS+ L G +A
Sbjct: 11 LNAKCFTKASIN---NPSKP--KPVSLLSIHNLPKGLLSSENAS----NLSIPLTGAAIA 61
Query: 540 GAIFSTLSSCDPAMAAQQIAEI 605
GAIFSTLSSCD A AAQQIAE+
Sbjct: 62 GAIFSTLSSCDSAFAAQQIAEL 83
>ref|XP_003538579.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Glycine max]
Length = 197
Score = 70.9 bits (172), Expect = 3e-10
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSK-PPIKP-ISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTV 536
+N+KC+++ S KL+ K PP KP +S+ SLQNLPK LT S AGT +
Sbjct: 12 INSKCINTTGSSHKLHNPKLPPSKPTLSLFSLQNLPKGLTSHVSTST--------AGTAI 63
Query: 537 AGAIFSTLSSCDPAMAAQQIAEI 605
AGAIFS+L++CD A+AA QIAE+
Sbjct: 64 AGAIFSSLANCDAALAASQIAEL 86
>ref|XP_004310006.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 193
Score = 68.9 bits (167), Expect = 1e-09
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKP--PIKPISILSLQNLPKVLTKSSKHSVDPNSLSLLAGTTV 536
+NAKCLS+ ++ KL KP P KPIS+LS+QNLPK L + +
Sbjct: 12 MNAKCLSTTTNSAKLPNLKPITPTKPISLLSIQNLPK---------------GTLTSSAL 56
Query: 537 AGAIFSTLSSCDPAMAAQQIAEI 605
AGAIF+T+S+ +PA+AAQQIA+I
Sbjct: 57 AGAIFATISASEPALAAQQIAQI 79
>gb|AFK39275.1| unknown [Medicago truncatula] gi|388509102|gb|AFK42617.1| unknown
[Medicago truncatula]
Length = 202
Score = 67.0 bits (162), Expect = 4e-09
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +3
Query: 363 LNAKCLSSNSSPTKLNTSKPPIKPISILSLQNL-PKVLTKSSKHSVDPNSLSLLAGTTVA 539
+NAK L++ SSP N +K P S++SL+NL PK + + + + +AGT +A
Sbjct: 11 INAKSLNTTSSPKFHNPTKLITNPTSLISLKNLLPKKIPTTENIKLSTS----IAGTALA 66
Query: 540 GAIFSTLSSCDPAMAAQQIAEI 605
GAIFSTLS+CD A AAQQIAEI
Sbjct: 67 GAIFSTLSTCDAAFAAQQIAEI 88