BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000127
         (1894 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   715   0.0  
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   701   0.0  
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         696   0.0  
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   691   0.0  
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   689   0.0  
ref|XP_007044701.1| RNA-binding CRS1 / YhbY (CRM) domain-contain...   688   0.0  
gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]             680   0.0  
ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chlorop...   679   0.0  
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop...   676   0.0  
ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Popu...   676   0.0  
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr...   674   0.0  
ref|XP_004509634.1| PREDICTED: CRS2-associated factor 2, chlorop...   659   0.0  
ref|XP_007227482.1| hypothetical protein PRUPE_ppa003604mg [Prun...   653   0.0  
ref|XP_007153751.1| hypothetical protein PHAVU_003G062100g [Phas...   648   0.0  
ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutr...   647   0.0  
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop...   646   0.0  
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]...   644   0.0  
ref|XP_006307133.1| hypothetical protein CARUB_v10008723mg [Caps...   642   0.0  
ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arab...   642   0.0  
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   639   e-180

>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  715 bits (1846), Expect = 0.0
 Identities = 375/578 (64%), Positives = 420/578 (72%), Gaps = 7/578 (1%)
 Frame = +3

Query: 66   MAILATL-ASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQ 242
            M ILATL  S +LFSS P  P  NDS  T                 LKS ++ +P   P 
Sbjct: 1    MVILATLPGSSSLFSSLPQGPPPNDS--TTSTPPQPPIPIPKYPPPLKSQKSSRPPTKP- 57

Query: 243  SPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKV 422
             P PA K+ H R+KYYKPVS+GVIAS+ DRSVV+GESGVSYLLPGAPFEFQ+SYSETPK 
Sbjct: 58   -PTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKA 116

Query: 423  KPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPF 602
            KPLAIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK VEMPGPF
Sbjct: 117  KPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPF 176

Query: 603  RMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 782
             +GKFPVEGRTREEILGEPLS+AEI++L+KP+LSHNRQVNLGRDGLTHNMLELIHSHWKR
Sbjct: 177  PLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKR 236

Query: 783  QRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLW 962
            QRVCKVRCKGVPT+DMDNVC+HLEEKT GKIIHRVGGVVYLFRGRNYNYRTRPQYP+MLW
Sbjct: 237  QRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLW 296

Query: 963  KPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSS 1142
            KPAAPVYPKLIQEAPEGLTK EAD+LRMKGKNLIPIC+L KNG YI+LV DVR+AFEGS 
Sbjct: 297  KPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSP 356

Query: 1143 LVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRF---PEYHSPVR 1313
            LVKI+C+GMHASDYKK+GAKLKELVPCVLLSFD+EQIL WRG  WKS +   P +  PV 
Sbjct: 357  LVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPV- 415

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGP 1493
                                   +  +   + +SPK+MSLWK AIESSKALLL+E  LGP
Sbjct: 416  -----VADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDETGLGP 470

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXX 1673
            DALL+ VE FE +SQ TEHSYPAL++                      Y           
Sbjct: 471  DALLKVVEEFEGISQATEHSYPALVM-------SSEDGTGGTKAEYEGYNSEDYSEDEMY 523

Query: 1674 XXXXXXXY---DPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                   Y   +  E  E+ VP GSLP+D +A++L  E
Sbjct: 524  NDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGEE 561


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  701 bits (1808), Expect = 0.0
 Identities = 368/575 (64%), Positives = 414/575 (72%), Gaps = 4/575 (0%)
 Frame = +3

Query: 66   MAILATL-ASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQ 242
            M ILATL  S +LFSS P  P  N   ST                 LKS ++ +P   P 
Sbjct: 1    MVILATLPGSSSLFSSLPQGPPPN--ASTTSTPPQPPIPIPKYPPPLKSQKSPRPPTKPS 58

Query: 243  SPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKV 422
            +P  A K+ H R+KYYKPVS+GVIAS+ DRSVV+GESGVSYLL GAPFEFQ+SYSETPK 
Sbjct: 59   TP--AFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLAGAPFEFQFSYSETPKA 116

Query: 423  KPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPF 602
            KPLAIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK VEMPGPF
Sbjct: 117  KPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPF 176

Query: 603  RMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKR 782
             +GKFPVEGRTREEILGEPLS+AEI++L+KP+LSHNRQVNLGRDGLTHNMLELIHSHWKR
Sbjct: 177  PLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKR 236

Query: 783  QRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLW 962
            QRVCKV CKGVPT+DMDNVC+HLEEKT GKIIHRVGGVVYLFRGRNYNYRTRPQYP+MLW
Sbjct: 237  QRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLW 296

Query: 963  KPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSS 1142
            KPAAPVYPKLIQEAPEGLTK EAD+LRMKG NLIPIC+L KNG YI+LV DVR+AFEGS 
Sbjct: 297  KPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVYISLVKDVRDAFEGSP 356

Query: 1143 LVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRF---PEYHSPVR 1313
            LVKI+C+GMHASDYKK+GAKLKE VPCVLLSFD+EQIL WRG  WKS +   P +  PV 
Sbjct: 357  LVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPV- 415

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGP 1493
                                   +  +   + +SPK+MSLWK AIESSKALLL+EI LGP
Sbjct: 416  -----VADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDEIGLGP 470

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXX 1673
            DALL+ VE FE +SQ TEHSYPAL++                                  
Sbjct: 471  DALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHEGYNSE-----DYSEDEMYND 525

Query: 1674 XXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                    +  E  E+ VP GSLP+D +A++L  E
Sbjct: 526  DDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGEE 560


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  696 bits (1795), Expect = 0.0
 Identities = 355/571 (62%), Positives = 410/571 (71%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            MA + +L    LFSS PS P  ++   T                +    RT + +N P+S
Sbjct: 48   MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKS----RTLRTNNPPKS 103

Query: 246  PNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKVK 425
            PNPALK+FHRR+KYYKPV +GVI+S  +R+VV+G+SGVSYLLPGAPFEFQYSYSETP VK
Sbjct: 104  PNPALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVK 163

Query: 426  PLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPFR 605
            P+AIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK V++PGPF 
Sbjct: 164  PIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFP 223

Query: 606  MGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 785
            +G++P EG++REEILGEPL   EI++L+KPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ
Sbjct: 224  LGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 283

Query: 786  RVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLWK 965
            RVCKVRCKGVPTVDMDN+C+H+EEKT GKIIHRVGGV+YLFRGRNYNYRTRPQYP+MLWK
Sbjct: 284  RVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWK 343

Query: 966  PAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSSL 1145
            PAAPVYPKLIQEAPEGLTK EA++LRMKGKNL+PICKLAKNG YI+LV DVR+AFEGS L
Sbjct: 344  PAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSIL 403

Query: 1146 VKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVRDVNH 1325
            VKI+C GMH SDYKKLGAKLKELVPCVLLSFD EQILMWRG+ WKS   +  S       
Sbjct: 404  VKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRA 463

Query: 1326 HXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGPDALL 1505
                               N  N   + +SPK+  LW+RAI+S+KAL+L+EI L PD LL
Sbjct: 464  SSNDSLGSSGESVENSDLLN-GNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELL 522

Query: 1506 EKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXX 1685
            E+VE FE +SQ TEHSYPA I                                       
Sbjct: 523  ERVEEFERISQATEHSYPAFITSSEEVSSPADSPES----------QDHSEANYNSDDDV 572

Query: 1686 XXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                D F++ +  VP GSLP+D IA+KL SE
Sbjct: 573  GREEDLFDNVDPLVPLGSLPVDIIAKKLSSE 603


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  691 bits (1782), Expect = 0.0
 Identities = 358/582 (61%), Positives = 413/582 (70%), Gaps = 3/582 (0%)
 Frame = +3

Query: 42   RKASCLSVMAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQ 221
            +K   +  MA + +L    LFSS PS P  ++   T                +    RT 
Sbjct: 39   KKKERIVTMAGIPSLPGLTLFSSLPSAPPPHEPTPTSSPSTPIPIPKYPPPKS----RTL 94

Query: 222  KPHNTPQSPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYS 401
            + +N P+ PNPALK+FH R+KYYKPV +GVI+S  +R+VV+G+SGVSY LPGAPFEFQYS
Sbjct: 95   RTNNPPKPPNPALKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYS 154

Query: 402  YSETPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKF 581
            YSETPKVKP+AIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK 
Sbjct: 155  YSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKL 214

Query: 582  VEMPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLEL 761
            V++PGPF +G+ P EG++REEILGEPL   EI++L+KPHLSHNRQVNLGRDGLTHNMLEL
Sbjct: 215  VQLPGPFPLGQHPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLEL 274

Query: 762  IHSHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRP 941
            IHSHWKRQRVCKVRCKGVPTVDMDN+C+H+EEKT GKIIHRVGGV+YLFRGRNYNYRTRP
Sbjct: 275  IHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 334

Query: 942  QYPIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVR 1121
            QYP+MLWKPAAPVYPKLIQEAPEGLTK EA+ LRMKGKNL+PICKLAKNG YI+LV+DVR
Sbjct: 335  QYPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVR 394

Query: 1122 NAFEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYH 1301
            +AFEGS LVKI+C GMH SDYKKLGAKLKELVPCVLLSFD EQILMWRG+ WKS   +  
Sbjct: 395  HAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDR 454

Query: 1302 S---PVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLL 1472
            S   P R  ++                   +   KT    SPK+  LW+ AI+S+KALLL
Sbjct: 455  SAPLPSRASSNDSLGSPGESLENSDLLHGNHHTIKT----SPKMKLLWEHAIDSNKALLL 510

Query: 1473 EEIELGPDALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXX 1652
            +EI L PD LLEKVE FE +SQ TEHSYPA I                            
Sbjct: 511  DEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSPDDSPKS----------QDH 560

Query: 1653 XXXXXXXXXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                           D F++A+  VP GSLP+D IA+KL SE
Sbjct: 561  TEANYNSDDDVGREEDLFDNADPLVPLGSLPVDIIAKKLSSE 602


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  689 bits (1779), Expect = 0.0
 Identities = 358/582 (61%), Positives = 413/582 (70%), Gaps = 3/582 (0%)
 Frame = +3

Query: 42   RKASCLSVMAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQ 221
            +K   +  MA + +L    LFSS PS P  ++   T                +    RT 
Sbjct: 40   KKKERIVTMAGIPSLPGLTLFSSLPSAPPPHEPTPTSSPSTPIPIPKYPPPKS----RTL 95

Query: 222  KPHNTPQSPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYS 401
            + +N P+ PNPALK+FH R+KYYKPV +GVI+S  +R+VV+G+SGVSY LPGAPFEFQYS
Sbjct: 96   RTNNPPKPPNPALKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYS 155

Query: 402  YSETPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKF 581
            YSETPKVKP+AIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK 
Sbjct: 156  YSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKL 215

Query: 582  VEMPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLEL 761
            V++PGPF +G+ P EG++REEILGEPL   EI++L+KPHLSHNRQVNLGRDGLTHNMLEL
Sbjct: 216  VQLPGPFPLGQHPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLEL 275

Query: 762  IHSHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRP 941
            IHSHWKRQRVCKVRCKGVPTVDMDN+C+H+EEKT GKIIHRVGGV+YLFRGRNYNYRTRP
Sbjct: 276  IHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 335

Query: 942  QYPIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVR 1121
            QYP+MLWKPAAPVYPKLIQEAPEGLTK EA+ LRMKGKNL+PICKLAKNG YI+LV+DVR
Sbjct: 336  QYPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVR 395

Query: 1122 NAFEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYH 1301
            +AFEGS LVKI+C GMH SDYKKLGAKLKELVPCVLLSFD EQILMWRG+ WKS   +  
Sbjct: 396  HAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDC 455

Query: 1302 S---PVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLL 1472
            S   P R  ++                   +   KT    SPK+  LW+ AI+S+KALLL
Sbjct: 456  SAPLPSRASSNDSLGSPGESLENSDLLHDNHHTIKT----SPKMKLLWEHAIDSNKALLL 511

Query: 1473 EEIELGPDALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXX 1652
            +EI L PD LLEKVE FE +SQ TEHSYPA I                            
Sbjct: 512  DEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSPDDSPKS----------QDH 561

Query: 1653 XXXXXXXXXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                           D F++A+  VP GSLP+D IA+KL SE
Sbjct: 562  TEANYNSDDDVGREEDLFDNADPLVPLGSLPVDIIAKKLSSE 603


>ref|XP_007044701.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
            cacao] gi|508708636|gb|EOY00533.1| RNA-binding CRS1 /
            YhbY (CRM) domain-containing protein [Theobroma cacao]
          Length = 562

 Score =  688 bits (1775), Expect = 0.0
 Identities = 354/571 (61%), Positives = 405/571 (70%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            M ILA+L   NLFSS PS P  ND+ S                      R + P  T   
Sbjct: 1    MPILASLPGLNLFSSLPSNPPQNDATSPTPSPSPPFPIPKYPPP-----RKRNPQRTLPQ 55

Query: 246  PNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKVK 425
             NPA+   HRR+ Y KPV +GVI+S+ DR VV+GE+GVSY LPGAPFEFQ+SYSETPK +
Sbjct: 56   SNPAISLPHRRSNYRKPVKKGVISSDGDRCVVIGENGVSYQLPGAPFEFQFSYSETPKAE 115

Query: 426  PLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPFR 605
            P+AIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P+KKGVK+VEMPGPF 
Sbjct: 116  PIAIREPAFLPFAPPTMPRPWTGKAPLIKSKKKIPLFDSFNPPPPDKKGVKYVEMPGPFP 175

Query: 606  MGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 785
             GK+P EG+TREEILGEPL + EIK+L+KP LS NRQVNLGRDGLTHNML+LIH+HWKR+
Sbjct: 176  YGKYPKEGKTREEILGEPLKKWEIKMLVKPLLSDNRQVNLGRDGLTHNMLDLIHTHWKRR 235

Query: 786  RVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLWK 965
            RVCK++CKGVPTVDMDNVC H+EEKT GKIIHRVGGVVYLFRGRNYNYRTRPQYP+MLWK
Sbjct: 236  RVCKIKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWK 295

Query: 966  PAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSSL 1145
            PAAPVYPKLIQEAPEGLTKAE D LR KGK+L+PICKLAKNG Y +LV DVR+AFEGS L
Sbjct: 296  PAAPVYPKLIQEAPEGLTKAETDVLRKKGKSLLPICKLAKNGVYASLVKDVRDAFEGSPL 355

Query: 1146 VKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVRDVNH 1325
            VKI+C+GMHASDYKK+GAKLKEL PCVLLSFD+EQILMWRG+ WKS +PE  S +     
Sbjct: 356  VKIDCKGMHASDYKKIGAKLKELAPCVLLSFDDEQILMWRGQDWKSMYPEAPSTLLPSKS 415

Query: 1326 HXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGPDALL 1505
                               +  N    +SSPK+M+LW  AIES+KALLL+EI LGPDALL
Sbjct: 416  GISSGLDDSAKSADDCHTPDIKNG---ISSPKMMTLWNNAIESNKALLLDEIALGPDALL 472

Query: 1506 EKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXX 1685
            EKVE FE +S VTEHS  AL+L                                      
Sbjct: 473  EKVEEFEGISLVTEHSCEALVLSSEDGSGSSMAESEAGSYSED---FGGENEIYSDDDII 529

Query: 1686 XXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
               Y   E  ++S+P GSLP+D IAE+LR E
Sbjct: 530  NDEYYDVEEVDSSIPLGSLPVDKIAERLRRE 560


>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
          Length = 571

 Score =  680 bits (1754), Expect = 0.0
 Identities = 356/581 (61%), Positives = 410/581 (70%), Gaps = 10/581 (1%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            MAILA+L   NLFSS PS P  ND   +                + KS R + P N PQ+
Sbjct: 1    MAILASLQGLNLFSSLPSTPPPNDQPPSTSSSPSPPIPIPKYPPSFKSQRRKPPQNVPQN 60

Query: 246  -----PNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSE 410
                 PNPALKS HRR+ YYKPV +GVIAS++ RSVV+G+SGVSYLLPGAPFEFQYSYSE
Sbjct: 61   SSKPPPNPALKSVHRRSNYYKPVRDGVIASDDGRSVVIGDSGVSYLLPGAPFEFQYSYSE 120

Query: 411  TPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXX-----IPLFDSFNPPSPEKKGV 575
            TPKVKPLAIREPAFLPFAPPTM RPWTGKAPL           IPL DSFNPP    +GV
Sbjct: 121  TPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSAKEKKRNRKIPLLDSFNPPPRGTEGV 180

Query: 576  KFVEMPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNML 755
            K +EMPGPF  GK+P   +T+EEILGEPL + EIK+LIKPHLS NRQVNLGRDGLTHNML
Sbjct: 181  KQMEMPGPFPFGKYPKVRKTKEEILGEPLKKWEIKMLIKPHLSSNRQVNLGRDGLTHNML 240

Query: 756  ELIHSHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRT 935
            ELIHSHWKR  VCK+RCKGVPTVDMDNVC H+E KT GKII+R GG VYLFRGRNYNY  
Sbjct: 241  ELIHSHWKRTPVCKIRCKGVPTVDMDNVCQHIENKTGGKIINRAGGAVYLFRGRNYNYAN 300

Query: 936  RPQYPIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSD 1115
            RPQYP+MLWKPAAPVYPKLIQEAP GLTK EA++LRMKGK L+PICKLAKNG YI+LV D
Sbjct: 301  RPQYPVMLWKPAAPVYPKLIQEAPGGLTKDEANELRMKGKKLLPICKLAKNGVYISLVKD 360

Query: 1116 VRNAFEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPE 1295
            VR+AFEGS LVKI+C+GMHASDYKKLGAKLKELVPCVLLSFD+EQILMWRG  WKS + +
Sbjct: 361  VRHAFEGSPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGSDWKSMYRD 420

Query: 1296 YHSPVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLE 1475
               P   +  +                  +P  +T + +SPK++SLWKRA+ES+KA+LL+
Sbjct: 421  VSIP--SILGNDVVTSDLHRSGKDNDDSGDPDTQT-VRTSPKMLSLWKRALESNKAILLD 477

Query: 1476 EIELGPDALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXX 1655
            EI LGPDALL KVE FE +SQ TEHSYPALI+                            
Sbjct: 478  EINLGPDALLMKVEEFEGISQATEHSYPALIVSGEDGTSSSMEESEYLS-------QSDD 530

Query: 1656 XXXXXXXXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                          D +  +++S+P GSLP+D IA+K   +
Sbjct: 531  DNDDFIDDYDEENDDVYYDSDSSLPLGSLPVDVIAKKFSQD 571


>ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 572

 Score =  679 bits (1751), Expect = 0.0
 Identities = 358/580 (61%), Positives = 413/580 (71%), Gaps = 12/580 (2%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLND-SISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQ 242
            MA++A+L   NLFSS PS P  ND + +                  +K+ R     N+P 
Sbjct: 1    MAVIASLGF-NLFSSLPSNPPPNDPNPNAASTSASPPIPIPKYPPPIKTAR-----NSPP 54

Query: 243  SPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKV 422
             PNPALK+FHRRTKYYKPV +GVI S+ DR+VV+GE+G+SY LPGAPFEFQYSYSETPK 
Sbjct: 55   PPNPALKNFHRRTKYYKPVRDGVITSDGDRAVVIGENGLSYQLPGAPFEFQYSYSETPKA 114

Query: 423  KPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXX-----IPLFDSFNPPSPEKKGVKFVE 587
            KPLAIREPAFLPFA P M RPWTGKAPL           +PLFDSFNPP+P  KGVK VE
Sbjct: 115  KPLAIREPAFLPFATPEMPRPWTGKAPLKSAKEKKMKRKVPLFDSFNPPAPGTKGVKRVE 174

Query: 588  MPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIH 767
            MPGPF +GK P  G+TREEILGEPL + E+++L++  +S +RQVNLGRDGLTHNML+LIH
Sbjct: 175  MPGPFDLGKRPKPGKTREEILGEPLKKWEVQMLVQEQMSDSRQVNLGRDGLTHNMLDLIH 234

Query: 768  SHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQY 947
            SHWKR+RVC+V+CKGVPTVDMDN+C H+EE+T GKIIHRVGGVVYLFRGRNYNY TRPQY
Sbjct: 235  SHWKRRRVCRVKCKGVPTVDMDNICRHIEERTGGKIIHRVGGVVYLFRGRNYNYNTRPQY 294

Query: 948  PIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNA 1127
            P+MLWKPAAPVYPKLIQEAPEGLTKAEA++LR KGK L+PICKLAKNG YI LV DVR+A
Sbjct: 295  PLMLWKPAAPVYPKLIQEAPEGLTKAEAEELRKKGKRLLPICKLAKNGVYITLVRDVRHA 354

Query: 1128 FEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKS----RFPE 1295
            FEGSSLVKI+C+GMHASDYKKLGAKLKELVPCVLLSFD+EQILMWRG  W S    R P 
Sbjct: 355  FEGSSLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGPDWVSISGTRLPS 414

Query: 1296 YHSPVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLE 1475
             +S V    +                    P  KT ++SSPK+MSLW+R+IE+ KALLLE
Sbjct: 415  AYSDV----YSDVDIITSKGRVKDDDASSKPDTKT-VISSPKMMSLWRRSIETKKALLLE 469

Query: 1476 EIELGPDALLEKVEAFEAVSQVTEHSYPALIL--XXXXXXXXXXXXXXXXXXXXXXYVXX 1649
            E++L PDALLEKVE FE +SQVTEHSYPALIL                        Y   
Sbjct: 470  ELDLDPDALLEKVEEFEGISQVTEHSYPALILSSEDGTSNAIQVYEDAPPNGPYSEYEEA 529

Query: 1650 XXXXXXXXXXXXXXXYDPFEHAETSVPFGSLPLDSIAEKL 1769
                            D   +   SVP GSLP+D IAEKL
Sbjct: 530  YSDDNDDDYVYEDDSDDDALYDSDSVPLGSLPIDVIAEKL 569


>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
            sinensis]
          Length = 552

 Score =  676 bits (1745), Expect = 0.0
 Identities = 358/571 (62%), Positives = 404/571 (70%), Gaps = 2/571 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            M ILA+L   NLFSS PS P   D                         + QKP + P  
Sbjct: 1    MRILASLPDGNLFSSLPSTPPPRDPRLPPPSTPPPIPVPKYPP------KEQKPKSRP-- 52

Query: 246  PNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKVK 425
             NPA K  HR T+YYKPV+ GVIAS+ DR V +GESGVSY LPGAPFEFQYSY+ETP+ K
Sbjct: 53   -NPAFKLPHRHTRYYKPVNPGVIASDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAK 111

Query: 426  PLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPFR 605
            PLAIREPAFLPF PPTM RPWTGK PL      IPLFDSFNPP P KKGVK VEMPGPF 
Sbjct: 112  PLAIREPAFLPFGPPTMPRPWTGKQPLKKSKKKIPLFDSFNPPLPGKKGVKHVEMPGPFP 171

Query: 606  MGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 785
            +GK+P EG+TREEILGEPL R EI +L+KP L  NRQVNLGRDGLTHNMLELIHSHWKR+
Sbjct: 172  LGKYPQEGKTREEILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRR 231

Query: 786  RVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLWK 965
            RV K++CKGVPTVDMDNVC  LEEKT GKII RVGG+VYLFRGRNYNYRTRPQYP+MLWK
Sbjct: 232  RVIKIKCKGVPTVDMDNVCRRLEEKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWK 291

Query: 966  PAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSSL 1145
            PAAPVYPKLIQEAPEGLTK EAD+LR KGK+L+PICKLAKNG Y+ LV DVRNAFEGSSL
Sbjct: 292  PAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSL 351

Query: 1146 VKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVRDVNH 1325
            VK+NC+GMHASDYKKLGAKLKELVPCVLLSFD+EQILMWRG+ WKS +PE  S    V+ 
Sbjct: 352  VKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVD- 410

Query: 1326 HXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGPDALL 1505
                               +P+  T + SSPK++SLWKRAIES+KAL+L+EI LGPD LL
Sbjct: 411  ----LDIAGDADGSGTPSDDPSQGT-IRSSPKMISLWKRAIESTKALVLDEINLGPDDLL 465

Query: 1506 EKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXX 1685
            +KVE FE +SQ  EHSYPAL+L                                      
Sbjct: 466  KKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQ------SENYDEDEFYPEDD 519

Query: 1686 XXXYDPFEHAETS--VPFGSLPLDSIAEKLR 1772
                D F  +++S  VP GSLP+D IAE+L+
Sbjct: 520  FNDDDEFYDSDSSDVVPLGSLPVDHIAERLQ 550


>ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Populus trichocarpa]
            gi|550329113|gb|EEF01860.2| hypothetical protein
            POPTR_0010s05230g [Populus trichocarpa]
          Length = 557

 Score =  676 bits (1744), Expect = 0.0
 Identities = 359/572 (62%), Positives = 402/572 (70%), Gaps = 4/572 (0%)
 Frame = +3

Query: 66   MAILATLASP--NLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTP 239
            MAI+A+L +P  NLFSS P     + + S+                 LK  +        
Sbjct: 1    MAIVASLPTPGLNLFSSLPLGK--DPTASSSPSPPPPPIPIPKYPPPLKKSKN------- 51

Query: 240  QSPNPALKSFHRRTKYYKPVSEG--VIASENDRSVVVGESGVSYLLPGAPFEFQYSYSET 413
             S NPA K  H RTKYYKPV +G  VIAS+ DRSV+VG+SGVSYLLPGAPFEFQ+SYSET
Sbjct: 52   -SANPAFKIPHLRTKYYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPGAPFEFQFSYSET 110

Query: 414  PKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMP 593
            PKVKPLAIREPAFLPFAPPTM RPWTGK PL      IP+FDSFNPP   KKGVK+VEMP
Sbjct: 111  PKVKPLAIREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPPAGKKGVKYVEMP 170

Query: 594  GPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSH 773
            GP+  GKFP EG++REEILGEPL   EIKLLIKPHLS NRQVNLG DGLTHNMLEL+HSH
Sbjct: 171  GPYPFGKFPEEGKSREEILGEPLKTWEIKLLIKPHLSDNRQVNLGEDGLTHNMLELVHSH 230

Query: 774  WKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPI 953
            WKR+RVCKVRCKGVPTVDMDNVC HLEEKT GKIIHRVGGVVYLFRGRNYNYRTRPQYP+
Sbjct: 231  WKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPV 290

Query: 954  MLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFE 1133
            MLWKPA PVYPKLIQEAPEGLTKA+AD+ R KGKNL+PICKLAKNG YI LV DVR AFE
Sbjct: 291  MLWKPATPVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRAAFE 350

Query: 1134 GSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVR 1313
            GS LVK++C+GM  SDYKKLGAKLK+LVPCVLLSFD+EQILMWRG+ WKS +PE    + 
Sbjct: 351  GSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSIS 410

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGP 1493
                                   + A    L SSPK+M LWK A+ES+KA+LL+EI+LGP
Sbjct: 411  FPAELDIASGSDDSGKSDDDCDNSDAK--ILSSSPKMMLLWKHALESNKAILLDEIDLGP 468

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXX 1673
            DALL KVE FE +SQ TEHSYPAL++                                  
Sbjct: 469  DALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSISTFEDDSH------SENFSEDDMY 522

Query: 1674 XXXXXXXYDPFEHAETSVPFGSLPLDSIAEKL 1769
                    + FE  ETS P GSL +D IAEKL
Sbjct: 523  SDDEYYDSESFEELETSAPPGSLSIDLIAEKL 554


>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
            gi|557540524|gb|ESR51568.1| hypothetical protein
            CICLE_v10031138mg [Citrus clementina]
          Length = 552

 Score =  674 bits (1738), Expect = 0.0
 Identities = 356/571 (62%), Positives = 404/571 (70%), Gaps = 2/571 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            M ILA+L   NLFSS PS P   D                         + +KP + P  
Sbjct: 1    MRILASLPDGNLFSSLPSTPPPRDPRLPPPSTPPPIPVPKYPP------KERKPKSRP-- 52

Query: 246  PNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKVK 425
             NPA K  HR T+YYKPV+ GVI+S+ DR V +GESGVSY LPGAPFEFQYSY+ETP+ K
Sbjct: 53   -NPAFKLPHRHTRYYKPVNPGVISSDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAK 111

Query: 426  PLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMPGPFR 605
            PLAIREPAFLPF PPTM RPWTGK PL      IPLFDSFNPP P KKGVK VEMPGPF 
Sbjct: 112  PLAIREPAFLPFGPPTMPRPWTGKQPLKKSKKKIPLFDSFNPPLPGKKGVKHVEMPGPFP 171

Query: 606  MGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 785
            +GK+P EG+TREEILGEPL R EI +L+KP L  NRQVNLGRDGLTHNMLELIHSHWKR+
Sbjct: 172  LGKYPQEGKTREEILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRR 231

Query: 786  RVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIMLWK 965
            RV K++CKGVPTVDMDNVC  LEEKT GKII RVGG+VYLFRGRNYNYRTRPQYP+MLWK
Sbjct: 232  RVIKIKCKGVPTVDMDNVCRRLEEKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWK 291

Query: 966  PAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGSSL 1145
            PAAPVYPKLIQEAPEGLTK EAD+LR KGK+L+PICKLAKNG Y+ LV DVRNAFEGSSL
Sbjct: 292  PAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSL 351

Query: 1146 VKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVRDVNH 1325
            VK+NC+GMHASDYKKLGAKLKELVPCVLLSFD+EQILMWRG+ WKS +PE  S    V+ 
Sbjct: 352  VKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVD- 410

Query: 1326 HXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGPDALL 1505
                               +P+  T + SSPK++SLWKRAIES+KAL+L+EI LGPD LL
Sbjct: 411  ----LDIAGDADGSGTPSDDPSQGT-IRSSPKMISLWKRAIESTKALVLDEINLGPDDLL 465

Query: 1506 EKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXX 1685
            +KVE FE +SQ  EHSYPAL+L                                      
Sbjct: 466  KKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQ------SENYDEDEFYPEDD 519

Query: 1686 XXXYDPFEHAETS--VPFGSLPLDSIAEKLR 1772
                D F  +++S  VP GSLP+D IAE+L+
Sbjct: 520  FNDDDEFYDSDSSDVVPLGSLPVDHIAERLQ 550


>ref|XP_004509634.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Cicer
            arietinum]
          Length = 556

 Score =  659 bits (1700), Expect = 0.0
 Identities = 337/505 (66%), Positives = 383/505 (75%), Gaps = 8/505 (1%)
 Frame = +3

Query: 72   ILATLASP-----NLFSS--PPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPH 230
            ++  L+SP     NLFSS  PP  P  + S +                  +      K  
Sbjct: 2    VIVALSSPLPGRTNLFSSLPPPHDPTYSSSATPRPPIP------------IPKYPPPKKS 49

Query: 231  NTPQSPNPALKSFHRRTKYYKPVSE-GVIASENDRSVVVGESGVSYLLPGAPFEFQYSYS 407
             TP  PNPALK +HR +KYYKP+ + GV+ S+ DRSV++GESGVSYLLPGAPFEFQ+SYS
Sbjct: 50   QTPPPPNPALK-YHRNSKYYKPIQQNGVLTSDGDRSVIIGESGVSYLLPGAPFEFQFSYS 108

Query: 408  ETPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVE 587
            ETPKVKPLAIREPAFLPF PPTM RPWTGKAPL      IPLFDSFNPP P  KGVK VE
Sbjct: 109  ETPKVKPLAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGMKGVKQVE 168

Query: 588  MPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIH 767
            MPGPF +GKFP EG +REEILGEPL R EI++L+KP  S NRQVNLGRDGLTHNMLELIH
Sbjct: 169  MPGPFPVGKFPEEGMSREEILGEPLKRWEIQMLVKPMTSDNRQVNLGRDGLTHNMLELIH 228

Query: 768  SHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQY 947
            SHWKR+RVCK+RCKGVPTVDMDNVC H+EEK  GKIIHRVGGVVYLFRGRNYNYRTRPQY
Sbjct: 229  SHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRVGGVVYLFRGRNYNYRTRPQY 288

Query: 948  PIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNA 1127
            P+MLWKPAAPVYPKLIQ+AP GL KAEAD LR KGK+++PICKLAKNG Y +LV DVR+A
Sbjct: 289  PVMLWKPAAPVYPKLIQDAPGGLAKAEADGLRKKGKSMLPICKLAKNGVYTSLVKDVRDA 348

Query: 1128 FEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSP 1307
            FEGS LVKI+C+G+  SDYKKLGAKLK+LVPCVLLSFD+EQILMWRG+ WKS++P+  +P
Sbjct: 349  FEGSPLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKEWKSKYPQ--AP 406

Query: 1308 VRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIEL 1487
            V   N                    N +N    + SPK++SLWK AIES+KALLLEE  L
Sbjct: 407  VFTPN-----------LDNTGKVGDNQSNHIGNI-SPKMLSLWKSAIESNKALLLEEFNL 454

Query: 1488 GPDALLEKVEAFEAVSQVTEHSYPA 1562
            GPDALLEKVE F  +SQ TEHSYPA
Sbjct: 455  GPDALLEKVEEFVGISQATEHSYPA 479


>ref|XP_007227482.1| hypothetical protein PRUPE_ppa003604mg [Prunus persica]
            gi|462424418|gb|EMJ28681.1| hypothetical protein
            PRUPE_ppa003604mg [Prunus persica]
          Length = 562

 Score =  653 bits (1685), Expect = 0.0
 Identities = 337/508 (66%), Positives = 387/508 (76%), Gaps = 6/508 (1%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLND-SISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQ 242
            MAI+A+L   NLFSS PS P  ND + ST                 LK     K  N P 
Sbjct: 1    MAIVASLPGFNLFSSLPSNPPPNDPNSSTTSASPSPPIPIPKYPPPLK-----KSQNAP- 54

Query: 243  SPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKV 422
             PNPALK+ HRRTKYYKPV +GVI+S+ DR+VV+GE+GVSYLLPGAPFEFQYSYSETPKV
Sbjct: 55   -PNPALKTVHRRTKYYKPVRDGVISSDGDRAVVIGENGVSYLLPGAPFEFQYSYSETPKV 113

Query: 423  KPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXX-----IPLFDSFNPPSPEKKGVKFVE 587
            KPLAIREPAFLPFAPPTM RPWTGKAPL           +PL DSF P +P   GVK V 
Sbjct: 114  KPLAIREPAFLPFAPPTMPRPWTGKAPLKSAKEKKLKRKVPLLDSFGPMAPGTSGVKEVV 173

Query: 588  MPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIH 767
            M  P  +GK+P + +TREEILGEPL + EIK+LI+P LS NRQVNLGRDGLTHNML+LIH
Sbjct: 174  MARPVELGKYPKQEKTREEILGEPLKKWEIKMLIQPQLSDNRQVNLGRDGLTHNMLDLIH 233

Query: 768  SHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQY 947
            SHWKR+ VCKV+CKGVPTVDMDNVC H+EE+T+GKIIHRVGGVVYLFRGRNY+Y+ RPQY
Sbjct: 234  SHWKRRPVCKVKCKGVPTVDMDNVCRHIEERTKGKIIHRVGGVVYLFRGRNYSYKDRPQY 293

Query: 948  PIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNA 1127
            P+MLWKPAAPVYPKLIQEAPEGLTK +A++ R KGK L+PICKLAKNG YI LV DVR+A
Sbjct: 294  PLMLWKPAAPVYPKLIQEAPEGLTKDQAEEFRKKGKRLLPICKLAKNGVYITLVRDVRHA 353

Query: 1128 FEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSP 1307
            FEGS LVKI+C+GMHASDYKKLGAKLKELVPCVLLSFD+E ILMWRG +W S      SP
Sbjct: 354  FEGSPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEHILMWRGPNWISMHQAAPSP 413

Query: 1308 VRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIEL 1487
                +                     P  KT +++SPK+MSLWKR+I+S+KALLL+E++L
Sbjct: 414  SDTADFDILSSTGRGKDYDKPC---KPDTKT-VMTSPKMMSLWKRSIDSNKALLLDELDL 469

Query: 1488 GPDALLEKVEAFEAVSQVTEHSYPALIL 1571
             PDALL+KVE FE VSQ TEHSYPALI+
Sbjct: 470  DPDALLKKVEEFEGVSQATEHSYPALIV 497


>ref|XP_007153751.1| hypothetical protein PHAVU_003G062100g [Phaseolus vulgaris]
            gi|561027105|gb|ESW25745.1| hypothetical protein
            PHAVU_003G062100g [Phaseolus vulgaris]
          Length = 575

 Score =  648 bits (1671), Expect = 0.0
 Identities = 330/507 (65%), Positives = 385/507 (75%), Gaps = 4/507 (0%)
 Frame = +3

Query: 63   VMAILATL-ASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTP 239
            ++A+ ++L A  NLFSS PS P   D  +                   KS   Q P   P
Sbjct: 3    IVALSSSLPAGRNLFSSLPSTPPPTDRTAAVSATPPPPIPVPKYPPPRKS---QNPPQPP 59

Query: 240  QSPNPALKSFHRRTKYYKPV-SEGVIASEN-DRSVVVGESGVSYLLPGAPFEFQYSYSET 413
             +PNP LK +HR +KY+K V S+GV+ S+  DRSV++GESGVSYLLPGAPFEFQ+SYSET
Sbjct: 60   -TPNPGLK-YHRNSKYHKRVPSDGVVVSDAADRSVIIGESGVSYLLPGAPFEFQFSYSET 117

Query: 414  PKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMP 593
            PK KP+AIREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP P  KGVK VEMP
Sbjct: 118  PKAKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKKKIPLFDSFNPPPPGTKGVKRVEMP 177

Query: 594  GPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSH 773
            GPF MG+FP EG+TREEILGEPL + E+++L++P +S+NRQVNLGRDGLTHNMLEL+HSH
Sbjct: 178  GPFPMGQFPKEGKTREEILGEPLKKWEVQMLVQPMISYNRQVNLGRDGLTHNMLELVHSH 237

Query: 774  WKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPI 953
            WKR R+CK+RC GVPTVDMDNVC+H+EEKT GKIIHR GGVVYLFRGRNYNYRTRPQYP+
Sbjct: 238  WKRSRICKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRAGGVVYLFRGRNYNYRTRPQYPV 297

Query: 954  MLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFE 1133
            MLWKPA PVYPKLI++AP GLTKAEAD+LR KGK+L+PICKLAKNG Y +LV +VR+AFE
Sbjct: 298  MLWKPATPVYPKLIEDAPGGLTKAEADELRKKGKSLLPICKLAKNGVYTSLVKNVRDAFE 357

Query: 1134 GSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVR 1313
            GS LVK+NC+G+  SDYKK+GAKLK+LVPCVLLSFD+EQIL+WRG+ WKSR   YH PV 
Sbjct: 358  GSVLVKVNCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILIWRGKDWKSR---YHQPVP 414

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLV-SSPKIMSLWKRAIESSKALLLEEIELG 1490
                                  Q       +V +SPK++SLWKRAIESSKALLL+E  LG
Sbjct: 415  VFAPSKSGFTGNSESSGEADGNQTEHGDNNVVNTSPKMLSLWKRAIESSKALLLDEFNLG 474

Query: 1491 PDALLEKVEAFEAVSQVTEHSYPALIL 1571
            PD LLEKVE FE  SQ  EHS+PA  L
Sbjct: 475  PDCLLEKVEEFEIASQALEHSHPAFSL 501


>ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutrema salsugineum]
            gi|557093857|gb|ESQ34439.1| hypothetical protein
            EUTSA_v10007246mg [Eutrema salsugineum]
          Length = 563

 Score =  647 bits (1669), Expect = 0.0
 Identities = 337/573 (58%), Positives = 398/573 (69%), Gaps = 4/573 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            MAI+A+L   NLFSS PS P   DS S                 + ++   +  ++T  +
Sbjct: 1    MAIVASLPDVNLFSSLPSTPPKADS-SAGTFRPAPPIPIPKYSPSRRNRNPRSSNHTDTN 59

Query: 246  P----NPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSET 413
            P    NPALK  HRRT+YYKPV EGVI+S+ +R++V+G+SGVSY LPGAPFEFQ+SYSET
Sbjct: 60   PKPQSNPALKLPHRRTRYYKPVKEGVISSDGERTIVIGDSGVSYQLPGAPFEFQFSYSET 119

Query: 414  PKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMP 593
            PK KP+ IREPAFLPFAPPTM RPWTGKAPL      IPLFDSFNPP   K GVK+VEMP
Sbjct: 120  PKAKPVGIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 179

Query: 594  GPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSH 773
            GP+  G++P E  TR+EILGEPL + E  +LIKPH+  NRQVNLGRDG THNMLELIHSH
Sbjct: 180  GPYPFGRYPKEAMTRDEILGEPLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSH 239

Query: 774  WKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPI 953
            WKR+RVCKVRCKGVPTVDMDNVC  LEEKT G+IIHRVGGVVYLFRGRNYNYRTRPQYP+
Sbjct: 240  WKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPL 299

Query: 954  MLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFE 1133
            MLWKPAAPVYPKLIQE PEGLTK EA + R+KGK+L PICKL+KNG Y++LV DVR+AFE
Sbjct: 300  MLWKPAAPVYPKLIQEIPEGLTKDEAHEFRVKGKSLKPICKLSKNGVYVSLVKDVRDAFE 359

Query: 1134 GSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVR 1313
             S LVK++C G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG  WKSRF +  +P+ 
Sbjct: 360  LSPLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSRFLD--NPLT 417

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGP 1493
             +                    Q  ++   ++SSPK++SLWKRA+ESSKA++LEE++L P
Sbjct: 418  PLLSE-TNIEDELDPSDKTGEEQTASDPNTVISSPKMISLWKRALESSKAIVLEELDLSP 476

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXX 1673
            D LLEKVE FE  SQ  EH+Y AL+L                                  
Sbjct: 477  DNLLEKVEEFEGTSQAAEHTYTALVLPSNDGAEDYVDDEE----------RPPVVYSDID 526

Query: 1674 XXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLR 1772
                    D  E  E + P GSLP+D I  KLR
Sbjct: 527  DDFDDECSDDDESLEPAGPVGSLPVDKIVRKLR 559


>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine max]
          Length = 593

 Score =  646 bits (1667), Expect = 0.0
 Identities = 334/512 (65%), Positives = 390/512 (76%), Gaps = 9/512 (1%)
 Frame = +3

Query: 63   VMAILATL-ASPNLFSS-PPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNT 236
            ++A+ ++L A  NLFSS PP+ P      +T Q                   +   P   
Sbjct: 3    IVALSSSLPAGRNLFSSIPPTPPPPTTVSATPQPPIPIP-------------KYPPPRKK 49

Query: 237  PQSP---NPALKSFHRRTKYYKPVSE--GVIASEN-DRSVVVGESGVSYLLPGAPFEFQY 398
            PQ P   NPALK  HRR+KY++PV    G+IAS+  DR+VV+GESGVSYLLPGAPFEFQ+
Sbjct: 50   PQPPPPQNPALKH-HRRSKYHRPVPRDGGIIASDGADRAVVIGESGVSYLLPGAPFEFQF 108

Query: 399  SYSETPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXX-IPLFDSFNPPSPEKKGV 575
            SYSETPK KP+AIREPAFLPFAPPTM RPWTGKAPL       +PLFDSFNPP    KGV
Sbjct: 109  SYSETPKAKPIAIREPAFLPFAPPTMPRPWTGKAPLKGKKSKKVPLFDSFNPPPAGTKGV 168

Query: 576  KFVEMPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNML 755
            K VEMPGPF MG+FP+EG++REEILGEPL + EI +L+KP +S+NRQVNLGRDGLTHNML
Sbjct: 169  KLVEMPGPFPMGQFPLEGKSREEILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNML 228

Query: 756  ELIHSHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRT 935
            ELIHSHWKR+RVCK+RC GVPTVDMDNVC+H+EEKT GKIIHRVGGVVYLFRGRNYNY T
Sbjct: 229  ELIHSHWKRRRVCKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRVGGVVYLFRGRNYNYST 288

Query: 936  RPQYPIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSD 1115
            RPQYP+MLWKPAAPVYPKLIQ+AP GLTK EAD+LRMKGK+L+PICKLAKNG Y +LV D
Sbjct: 289  RPQYPVMLWKPAAPVYPKLIQDAPGGLTKDEADELRMKGKSLLPICKLAKNGVYTSLVKD 348

Query: 1116 VRNAFEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPE 1295
            VR+AFEGS LVKINC+G+  SDYKK+GAKLK+LVPCVLLSFD+EQILMWRG+ WKSR+P+
Sbjct: 349  VRDAFEGSILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRYPQ 408

Query: 1296 YHSPVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLE 1475
               P+                       Q   +   + +SPK++SLWKRAI+SSKALLL+
Sbjct: 409  ---PLPVFTPSKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSLWKRAIQSSKALLLD 465

Query: 1476 EIELGPDALLEKVEAFEAVSQVTEHSYPALIL 1571
            E  LGPDALLEKVE F+ VSQ  EHS+PA  L
Sbjct: 466  EFNLGPDALLEKVEEFDTVSQALEHSHPAFSL 497


>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
            gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
            Full=CRS2-associated factor 2, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 2; Flags: Precursor
            gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
            [Arabidopsis thaliana]
            gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
            [Arabidopsis thaliana] gi|17065312|gb|AAL32810.1| Unknown
            protein [Arabidopsis thaliana] gi|21387129|gb|AAM47968.1|
            unknown protein [Arabidopsis thaliana]
            gi|332192262|gb|AEE30383.1| CRS2-associated factor 2
            [Arabidopsis thaliana]
          Length = 564

 Score =  644 bits (1661), Expect = 0.0
 Identities = 325/506 (64%), Positives = 385/506 (76%), Gaps = 4/506 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSIS-TEQXXXXXXXXXXXXXXTLKSLRTQKPHNT-P 239
            MAI+A+L   NLFSS PS P + DS S T +                ++ +T    +T P
Sbjct: 1    MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP 60

Query: 240  QSP--NPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSET 413
            + P  NPALK  H RT+YYKPV EGVI+S+ DR++++G+SGVSY LPGAPFEFQ+SYSET
Sbjct: 61   KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET 120

Query: 414  PKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEMP 593
            PKVKP+ IREPAF+PFAPPTM RPWTGKAPL      IPLFDSFNPP   K GVK+VEMP
Sbjct: 121  PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 180

Query: 594  GPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSH 773
            GP   G++P EG  REE+LGEPL R E  +LIKPH+  NRQVNLGRDG THNMLELIHSH
Sbjct: 181  GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSH 240

Query: 774  WKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPI 953
            WKR+RVCKVRCKGVPTVDM+NVC  LEEKT G+IIHRVGGVVYLFRGRNYNYRTRPQYP+
Sbjct: 241  WKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPL 300

Query: 954  MLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFE 1133
            MLWKPAAPVYPKLIQE PEGLTK EA + R+KGK+L PICKL+KNG Y++LV DVR+AFE
Sbjct: 301  MLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFE 360

Query: 1134 GSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVR 1313
             SSLVK++C G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG  WKSRF +  +P+ 
Sbjct: 361  LSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVD--NPLI 418

Query: 1314 DVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELGP 1493
              +                   Q  AN +  +SSPK++SLW+RA+ESSKA++LEE++LGP
Sbjct: 419  P-SLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGP 477

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALIL 1571
            D LL+KVE  E  S   EH+Y A++L
Sbjct: 478  DDLLKKVEELEGTSLAAEHTYTAMVL 503


>ref|XP_006307133.1| hypothetical protein CARUB_v10008723mg [Capsella rubella]
            gi|482575844|gb|EOA40031.1| hypothetical protein
            CARUB_v10008723mg [Capsella rubella]
          Length = 565

 Score =  642 bits (1657), Expect = 0.0
 Identities = 322/507 (63%), Positives = 379/507 (74%), Gaps = 5/507 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            MAI+++L   NLFSS PS P   DS                   + ++   +  H T   
Sbjct: 1    MAIVSSLRDINLFSSLPSTPPTADSSPGTLRPPPPPISIPKYSPSRRNRNPKTNHQTDTQ 60

Query: 246  P-----NPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSE 410
            P     NPALK  H RT+YYKPV EGVI+SE DR++++G+SGVSY LPGAPFEFQ+SYSE
Sbjct: 61   PKKQQSNPALKLPHHRTRYYKPVKEGVISSEGDRTILIGDSGVSYQLPGAPFEFQFSYSE 120

Query: 411  TPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFVEM 590
            TPKVKP+ IREPAF+PFAPPTM RPWTGKAPL      IPLFDSFNPP   K GVK+VEM
Sbjct: 121  TPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEM 180

Query: 591  PGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHS 770
            PGP   G++P EG  R+EILGEPL R E  +LIKPH+  NRQVNLGRDG THNMLELIHS
Sbjct: 181  PGPLPFGRYPKEGLNRDEILGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHS 240

Query: 771  HWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYP 950
            HWKR+RVCKVRCKGVPTVDMDNVC  LEEKT G+IIHRVGGVVYLFRGRNYNYRTRPQYP
Sbjct: 241  HWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYP 300

Query: 951  IMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAF 1130
            +MLWKPAAPVYPKLIQE PEGLTK EA + R+KGK+L PICKL+KNG Y++LV DVR+AF
Sbjct: 301  LMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAF 360

Query: 1131 EGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPV 1310
            E SSLVK++C G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG  WKSRF +  +P+
Sbjct: 361  ELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFLD--NPL 418

Query: 1311 RDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIELG 1490
               N                   +  ++   ++SSPK++SLWKRA+E+SKA++LEE++LG
Sbjct: 419  IP-NLSETNIVNELDPSDKAIEEEPVSDPNTVISSPKMISLWKRALETSKAVILEELDLG 477

Query: 1491 PDALLEKVEAFEAVSQVTEHSYPALIL 1571
            PD LL+KVE  E  S   EH+Y AL+L
Sbjct: 478  PDDLLKKVEELEGTSLAAEHTYTALVL 504


>ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
            lyrata] gi|297339127|gb|EFH69544.1| hypothetical protein
            ARALYDRAFT_335585 [Arabidopsis lyrata subsp. lyrata]
          Length = 565

 Score =  642 bits (1655), Expect = 0.0
 Identities = 326/509 (64%), Positives = 379/509 (74%), Gaps = 7/509 (1%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLK-------SLRTQK 224
            MAI+A+L   NLFSS PS P + DS S                 T          ++T  
Sbjct: 1    MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSTRNRNRKTNHQIQTDT 60

Query: 225  PHNTPQSPNPALKSFHRRTKYYKPVSEGVIASENDRSVVVGESGVSYLLPGAPFEFQYSY 404
                PQS NPALK  H RT+YYKPV EGVI+S+ DR++V+GESGVSY LPGAPFEFQ+SY
Sbjct: 61   QTKKPQS-NPALKLPHHRTRYYKPVKEGVISSDGDRTIVIGESGVSYQLPGAPFEFQFSY 119

Query: 405  SETPKVKPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXXIPLFDSFNPPSPEKKGVKFV 584
            SETPK KP+ IREPAF+PFAPPTM RPWTGKAPL      IPLFDSFNPP   K GVK+V
Sbjct: 120  SETPKAKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYV 179

Query: 585  EMPGPFRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELI 764
            EMPGP   G++P EG  REEILGEPL + E  +LIKPH+  NRQVNLGRDG THNMLELI
Sbjct: 180  EMPGPLPFGRYPKEGMNREEILGEPLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELI 239

Query: 765  HSHWKRQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQ 944
            HSHWKR+RVCKVRCKGVPTVDMDNVC  LEEKT G+IIHRVGGVVYLFRGRNYNYRTRPQ
Sbjct: 240  HSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQ 299

Query: 945  YPIMLWKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRN 1124
            YP+MLWKPAAPVYPKLIQE PEGLTK EA + R+KGK+L PICKL+KNG Y++LV DVR+
Sbjct: 300  YPLMLWKPAAPVYPKLIQEVPEGLTKEEALEFRVKGKSLRPICKLSKNGVYVSLVKDVRD 359

Query: 1125 AFEGSSLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHS 1304
            AFE S LVK++C G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG  WKSRF +  +
Sbjct: 360  AFELSPLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSRFVD--N 417

Query: 1305 PVRDVNHHXXXXXXXXXXXXXXXXXQNPANKTPLVSSPKIMSLWKRAIESSKALLLEEIE 1484
            P+   +                   Q  ++ +  +SSPK++SLWKRA+ESSKA++LEE++
Sbjct: 418  PLIP-SLSETNIANELDPSDKPSDEQTVSDPSSTISSPKMISLWKRALESSKAVILEELD 476

Query: 1485 LGPDALLEKVEAFEAVSQVTEHSYPALIL 1571
            LGPD LL+KVE  E  S   EHSY A++L
Sbjct: 477  LGPDDLLKKVEELEGTSLAAEHSYTAMVL 505


>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
            gi|223535358|gb|EEF37033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  639 bits (1649), Expect = e-180
 Identities = 340/575 (59%), Positives = 401/575 (69%), Gaps = 4/575 (0%)
 Frame = +3

Query: 66   MAILATLASPNLFSSPPSKPHLNDSISTEQXXXXXXXXXXXXXXTLKSLRTQKPHNTPQS 245
            MAI+A+L   N+FSS P+ P  N+     Q                  L+  K   T  S
Sbjct: 1    MAIIASLPGMNIFSSLPTNPPQNNHSPPPQPPIPIPKYPPP-------LKKSKNPQTASS 53

Query: 246  PNPALKSFHRRTKYYKPVSE-GVIASENDRSVVVGESGVSYLLPGAPFEFQYSYSETPKV 422
             +PA K  HRRTKYYKP+ + GVI+S+ DRSVVVGE+GVSY LPGAPFEFQ+SYSETPKV
Sbjct: 54   -SPAFKLPHRRTKYYKPIKQDGVISSDGDRSVVVGENGVSYKLPGAPFEFQFSYSETPKV 112

Query: 423  KPLAIREPAFLPFAPPTMARPWTGKAPLXXXXXX-IPLFDSFNPPSPEKKGVKFVEMPGP 599
            KPLAIREPAFLPF PPTM RPWTGKAPL       IPLF + + P+  K+GVK+ EMPG 
Sbjct: 113  KPLAIREPAFLPFGPPTMPRPWTGKAPLKKSKKKKIPLFSN-SIPNDAKEGVKYFEMPGD 171

Query: 600  FRMGKFPVEGRTREEILGEPLSRAEIKLLIKPHLSHNRQVNLGRDGLTHNMLELIHSHWK 779
             + GKFP E ++R EILG+PL+R EIK L+KP LS NRQVNLGRDGLTHNMLELIHSHW+
Sbjct: 172  LQFGKFPEEVKSRREILGKPLTRWEIKQLVKPLLSDNRQVNLGRDGLTHNMLELIHSHWR 231

Query: 780  RQRVCKVRCKGVPTVDMDNVCYHLEEKTRGKIIHRVGGVVYLFRGRNYNYRTRPQYPIML 959
            R  VCKVRCKG+PTVDM+N+C HLEE+T GKII+R+GGVVYLF GRNY+YR+R +YP+ML
Sbjct: 232  RSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNYDYRSRVRYPVML 291

Query: 960  WKPAAPVYPKLIQEAPEGLTKAEADDLRMKGKNLIPICKLAKNGTYINLVSDVRNAFEGS 1139
            WKPAAPVYPKLIQ+APEGLTKAEAD+ R KGKNL+PICKLAKNG YI LV DVRNAFEGS
Sbjct: 292  WKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLVRDVRNAFEGS 351

Query: 1140 SLVKINCQGMHASDYKKLGAKLKELVPCVLLSFDEEQILMWRGEHWKSRFPEYHSPVRDV 1319
             LVKI+C+GM+ SDYKKLGAKLKELVPCVLLSFD+E ILMWRG++WK  +PE  S     
Sbjct: 352  PLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILMWRGQNWKPMYPEVPSV---- 407

Query: 1320 NHHXXXXXXXXXXXXXXXXXQNPANKTPLV--SSPKIMSLWKRAIESSKALLLEEIELGP 1493
                                 +P+N+   V  SSPK+MSLW+ AIESSKA+LL++I+LGP
Sbjct: 408  -STPDAADFTSGSDDSGKFEDDPSNRDANVVRSSPKMMSLWECAIESSKAILLDQIDLGP 466

Query: 1494 DALLEKVEAFEAVSQVTEHSYPALILXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXX 1673
            D LL KVE FE +SQ TEHSYPA+IL                                  
Sbjct: 467  DDLLRKVEEFECISQATEHSYPAVILSSEDGANNTVAAFGDDSLSGSFTEEDDTYTDDEY 526

Query: 1674 XXXXXXXYDPFEHAETSVPFGSLPLDSIAEKLRSE 1778
                    D FE  +T+VP GSLP+D +AE+L  E
Sbjct: 527  EDDEYYDSDSFEEVDTAVPLGSLPVDRLAERLHQE 561