BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000125
         (2838 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   936   0.0  
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...   913   0.0  
ref|XP_006382239.1| hypothetical protein POPTR_0005s00240g [Popu...   911   0.0  
ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prun...   910   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   910   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   910   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   910   0.0  
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...   904   0.0  
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...   904   0.0  
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu...   903   0.0  
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...   903   0.0  
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   897   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   897   0.0  
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   896   0.0  
ref|XP_007031306.1| DEAD box RNA helicase isoform 1 [Theobroma c...   890   0.0  
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   889   0.0  
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   889   0.0  
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   884   0.0  
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   879   0.0  
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   877   0.0  

>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  936 bits (2420), Expect = 0.0
 Identities = 518/737 (70%), Positives = 556/737 (75%), Gaps = 25/737 (3%)
 Frame = -1

Query: 2601 LSLLPGDKSHFGD-KFP---------LRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGF 2452
            LSL   DK+H G  K P         LR S  Q   FV  AIATPNSVLSEEAFKGLGGF
Sbjct: 28   LSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGF 87

Query: 2451 SKXXXXXXXXXXXXXXXL-----------SISNLGLPQQLVESLEKRGITHLFPIQRAVL 2305
            SK               +           +++ LGLP +LVESLE+RGITHLFPIQRAVL
Sbjct: 88   SKDPLDVTDTDDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVL 147

Query: 2304 LPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELA 2125
            +PALEG+D+IARAKTGTGKTLAFGIPIIKRL+ DDE              LVLAPTRELA
Sbjct: 148  VPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELA 207

Query: 2124 RQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEV 1945
            +QVEKEIKESAPYL+TVCVYGGVSYI QQNALSRGVDVVVGTPGR           LGEV
Sbjct: 208  KQVEKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEV 267

Query: 1944 QYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDL 1765
            Q LVLDEADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDL
Sbjct: 268  QNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDL 327

Query: 1764 VGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTN 1585
            VGD DEKLAEGIKLYAIPTTA+SKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSMALTN
Sbjct: 328  VGDHDEKLAEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTN 387

Query: 1584 SIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPET 1405
            SIASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL+IHYELPNDPET
Sbjct: 388  SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 447

Query: 1404 FVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVV 1225
            FVHRSGRTGRAGKEG+AILMFTSSQRRTV+SLERDVGC+FEFISPPAIE+VLESSA+QVV
Sbjct: 448  FVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVV 507

Query: 1224 STLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQ 1045
            +TL GVHPESVEFF PTAQKLIEEKGT          SGFS+PPS RSLISHEQGW TLQ
Sbjct: 508  ATLNGVHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQ 567

Query: 1044 MTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLN 865
            +TRDS YSRG+LSARSVTGFLSDVYP AADE+GKIYL+ADE+VQGAVFDLPE+IAKELLN
Sbjct: 568  LTRDSGYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLN 627

Query: 864  KQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDS 685
            KQ+PPGNTI KITKLPALQDD P  D                             S+  S
Sbjct: 628  KQMPPGNTISKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGS 687

Query: 684  DFEDG---FQXXXXXXXXXXXXXXXXRARGDDWLI-XXXXXXXXXXXXXXXSGFGGACFN 517
            D + G    +                R   DDWLI                  FGG+CF 
Sbjct: 688  DDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFT 747

Query: 516  CGRSGHRASDCPDKQDY 466
            CGRSGHRAS+CP+K+DY
Sbjct: 748  CGRSGHRASECPNKRDY 764


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score =  913 bits (2360), Expect = 0.0
 Identities = 506/750 (67%), Positives = 545/750 (72%), Gaps = 39/750 (5%)
 Frame = -1

Query: 2607 SPLSLLPGDKSHFGDKFPLRSSRP-QRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXX 2431
            SP SL   DKSHF       + +    S  V+ AIATPNSVLSEEAFKGLG FSK     
Sbjct: 28   SPSSLPFPDKSHFNSVLRAYNCKSGSSSRLVASAIATPNSVLSEEAFKGLGDFSKDSFSG 87

Query: 2430 XXXXXXXXXXL------------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEG 2287
                                   +IS LGLPQ+LV+SLEKRGITHLFPIQRAVL+PALEG
Sbjct: 88   DEEDDYESEEGEPGEASVDDDELAISKLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEG 147

Query: 2286 QDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKE 2107
            +D+IARAKTGTGKTLAFGIPIIKRLT DDE              LVLAPTRELA+QVEKE
Sbjct: 148  RDLIARAKTGTGKTLAFGIPIIKRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKE 207

Query: 2106 IKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLD 1927
            IKESAP+LNTVCVYGGVSYI QQNALSRGVDVVVGTPGR           LGEVQYLVLD
Sbjct: 208  IKESAPHLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLD 267

Query: 1926 EADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDE 1747
            EADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDLVG++DE
Sbjct: 268  EADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGERDE 327

Query: 1746 KLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA 1567
            KLAEGIKLYAI TTA+SKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA
Sbjct: 328  KLAEGIKLYAISTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA 387

Query: 1566 LHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG 1387
            LHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG
Sbjct: 388  LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG 447

Query: 1386 RTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGV 1207
            RTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP+IE+VLESSA+ VV+TL GV
Sbjct: 448  RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGV 507

Query: 1206 HPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSD 1027
            H ESVEFF PTAQKLIEE+GT          SGF+RPPSSRSLI+HEQG  TLQ+ RD  
Sbjct: 508  HAESVEFFTPTAQKLIEEQGTSALAAALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPA 567

Query: 1026 YSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPG 847
            +SRG+LSARSVTGFLSDVY AAADE+GK+YL+ADE+VQ AVFDLPE+IAKELLN+++P G
Sbjct: 568  FSRGFLSARSVTGFLSDVYSAAADELGKVYLVADERVQSAVFDLPEEIAKELLNRELPSG 627

Query: 846  NTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGF 667
            NTI KITKLP LQDD P SD                               R   F D  
Sbjct: 628  NTISKITKLPPLQDDGPASDYYGRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDE 687

Query: 666  QXXXXXXXXXXXXXXXXRARG-----DDWLIXXXXXXXXXXXXXXXSG------------ 538
                              +RG     DDWLI                G            
Sbjct: 688  DDVFRSSGRSSRKPNNSWSRGSRSSSDDWLIGGRKSTPRSSSDDWLIGGRKSGSSWSQGS 747

Query: 537  ---------FGGACFNCGRSGHRASDCPDK 475
                     FGG+CFNCGRSGHRAS+CPDK
Sbjct: 748  SRSSSRDRSFGGSCFNCGRSGHRASECPDK 777


>ref|XP_006382239.1| hypothetical protein POPTR_0005s00240g [Populus trichocarpa]
            gi|550337590|gb|ERP60036.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score =  911 bits (2354), Expect = 0.0
 Identities = 492/720 (68%), Positives = 541/720 (75%), Gaps = 15/720 (2%)
 Frame = -1

Query: 2580 KSHFGDKFPLRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXX 2401
            K+    K  L  +    S     AIA+PNS+LSEEAFKGL GFS                
Sbjct: 59   KTQLSFKHSLIINNSSSSFSPPSAIASPNSILSEEAFKGLDGFSDFEADVDAGGADVDYA 118

Query: 2400 LS--------------ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAK 2263
             S              +S LGLP +LV++L+ RGITHLFPIQRAVL+PALEG+D+IARAK
Sbjct: 119  SSETEPSSNTSEDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAK 178

Query: 2262 TGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYL 2083
            TGTGKTLAFGIPIIKRLT D E              LVLAPTRELA+QVEKEIKESAPYL
Sbjct: 179  TGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYL 238

Query: 2082 NTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAV 1903
            ++VCVYGGVSY+ QQ+ALSRGVDVVVGTPGR           LGEV+YLVLDEADQML+ 
Sbjct: 239  SSVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSF 298

Query: 1902 GFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKL 1723
            GFEEDVEVILE LP KRQSMLFSATMP WVKKLARKYLDNPL IDLVGDQ+EKLAEGIKL
Sbjct: 299  GFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKL 358

Query: 1722 YAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQH 1543
            YA+  TA+SKRTILSDLVTVYAKGGKTI+FTQTKRDADEVSMALTN+IASEALHGDISQH
Sbjct: 359  YALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHGDISQH 418

Query: 1542 QRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 1363
            QRERTLN FR GKFTVLVATDVA+RGLDIPNVDL+IHYELPND ETFVHRSGRTGRAGKE
Sbjct: 419  QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 478

Query: 1362 GSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFF 1183
            G+AILMFTSSQRRTVRSLERD GC+FEF+SPPAIE+VLESSA+QVV+TL GVHPESVEFF
Sbjct: 479  GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 538

Query: 1182 IPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSA 1003
             PTAQKLIEE+GT          SGFS+PPSSRSLISH QGW TLQ+TRD  YSRG+LSA
Sbjct: 539  TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRGFLSA 598

Query: 1002 RSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITK 823
            RSVTGFLSDVYPAAADEVGKI++IADE+VQGAVFDLPE+IAKELLNKQIPPGNTI KITK
Sbjct: 599  RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 658

Query: 822  LPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSN-RDSDFEDGFQXXXXXX 646
            LPALQDD PP D                              + RDSD    ++      
Sbjct: 659  LPALQDDGPPGDFYGRFSSRDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGRSN 718

Query: 645  XXXXXXXXXXRARGDDWLIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPDKQDY 466
                      R+ GDDWLI                 FGG+CFNCGRSGHRAS+CP+K+D+
Sbjct: 719  SNENSWSQMSRSSGDDWLIGGRRSSRPPSRDR---SFGGSCFNCGRSGHRASECPNKKDF 775


>ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
            gi|462403994|gb|EMJ09551.1| hypothetical protein
            PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score =  910 bits (2352), Expect = 0.0
 Identities = 495/731 (67%), Positives = 546/731 (74%), Gaps = 19/731 (2%)
 Frame = -1

Query: 2601 LSLLPGDKSHFGDKFPLRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXX 2422
            LSL   ++ HF      +S   ++S  V+ AIATPNSVLSEEAFKGLGGFSK        
Sbjct: 39   LSLAFPERPHFNSVLRAKSGLVRQSSLVASAIATPNSVLSEEAFKGLGGFSKDSLDSDSE 98

Query: 2421 XXXXXXXLS---------ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIAR 2269
                    S         +S LGLPQ+LV+SLEKRGI+ LFPIQRAVL+PALEG+DIIAR
Sbjct: 99   YDSETEPASAAGDDDELALSKLGLPQRLVDSLEKRGISSLFPIQRAVLVPALEGRDIIAR 158

Query: 2268 AKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAP 2089
            AKTGTGKTLAFGIPI+KRLT DDE              LVLAPTRELA+QVEKEIKESAP
Sbjct: 159  AKTGTGKTLAFGIPILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIKESAP 218

Query: 2088 YLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQML 1909
            YLNTVCVYGGVSYI QQ+ALSRGVDVVVGTPGR           LGEVQYLVLDEAD ML
Sbjct: 219  YLNTVCVYGGVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADSML 278

Query: 1908 AVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGI 1729
            AVGFEEDVEVIL+ LP +RQSMLFSATMP WVKKLARKYLDNPLTIDLVGDQ+EKLAEGI
Sbjct: 279  AVGFEEDVEVILQKLPTQRQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDQEEKLAEGI 338

Query: 1728 KLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDIS 1549
            KLYA+ TT SSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSM+LT SIASEALHGDIS
Sbjct: 339  KLYALSTTGSSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDIS 398

Query: 1548 QHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 1369
            QHQRERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPND ETFVHRSGRTGRAG
Sbjct: 399  QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDSETFVHRSGRTGRAG 458

Query: 1368 KEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVE 1189
            K+G+A+LMFT++QRRTVR+LERDVGC+FEF+SPP IE+VLESSAQ VV+TL GVHPESV+
Sbjct: 459  KQGTAVLMFTNNQRRTVRTLERDVGCKFEFVSPPTIEEVLESSAQHVVATLSGVHPESVQ 518

Query: 1188 FFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYL 1009
            FF PTAQKLI+E+GT          SGFSRPPSSRSLI+HEQGWTTLQ+ RD  ++RG+L
Sbjct: 519  FFTPTAQKLIDEQGTNALAAALAQLSGFSRPPSSRSLITHEQGWTTLQIIRDPAFARGFL 578

Query: 1008 SARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKI 829
            SARSVTGFLSDVY AAADEVGKI++IADE+VQGAVFDLPE+IAKELLN+QIPPGNTI KI
Sbjct: 579  SARSVTGFLSDVYSAAADEVGKIHIIADERVQGAVFDLPEEIAKELLNRQIPPGNTISKI 638

Query: 828  TKLPALQDDRPPSD----------NXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDF 679
             KLPALQDD P +D          N                             +  S  
Sbjct: 639  NKLPALQDDGPVNDYYGRFSGRDRNSRRGGSRDRQGSSGFRSSRGWGSSDGADDSFRSGG 698

Query: 678  EDGFQXXXXXXXXXXXXXXXXRARGDDWLIXXXXXXXXXXXXXXXSGFGGACFNCGRSGH 499
              G +                R+  DDWLI                 FGG+CFNCGRSGH
Sbjct: 699  RGGGRGGGRSFGNSNSQSRTSRSTDDDWLI---GGRPSSRSSSRDRSFGGSCFNCGRSGH 755

Query: 498  RASDCPDKQDY 466
            RAS+CP KQ Y
Sbjct: 756  RASECPTKQGY 766


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  910 bits (2351), Expect = 0.0
 Identities = 503/747 (67%), Positives = 546/747 (73%), Gaps = 30/747 (4%)
 Frame = -1

Query: 2628 PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 2494
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 2493 SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL---------SISNLGLPQQLVESLEKRG 2341
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 2340 ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 2161
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 2160 XXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 1981
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 1980 XXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1801
                    LGEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1800 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1621
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1620 RDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1441
            RDADEVS+ALT+ IASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1440 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1261
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1260 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRS 1081
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT          SGFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1080 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 901
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 900  DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 721
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 720  XXXXXXXSNR---DSDFEDGF---QXXXXXXXXXXXXXXXXRARGDDWLIXXXXXXXXXX 559
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI---GGSRSSR 739

Query: 558  XXXXXSGFGGACFNCGRSGHRASDCPD 478
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 740  SSSRDRSFGGACFNCGRSGHRASECPN 766


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  910 bits (2351), Expect = 0.0
 Identities = 503/747 (67%), Positives = 546/747 (73%), Gaps = 30/747 (4%)
 Frame = -1

Query: 2628 PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 2494
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 2493 SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL---------SISNLGLPQQLVESLEKRG 2341
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 2340 ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 2161
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 2160 XXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 1981
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 1980 XXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1801
                    LGEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1800 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1621
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1620 RDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1441
            RDADEVS+ALT+ IASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1440 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1261
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1260 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRS 1081
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT          SGFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1080 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 901
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 900  DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 721
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 720  XXXXXXXSNR---DSDFEDGF---QXXXXXXXXXXXXXXXXRARGDDWLIXXXXXXXXXX 559
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI--GGSRSSRS 740

Query: 558  XXXXXSGFGGACFNCGRSGHRASDCPD 478
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 741  SSRDSRSFGGACFNCGRSGHRASECPN 767


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  910 bits (2351), Expect = 0.0
 Identities = 503/747 (67%), Positives = 546/747 (73%), Gaps = 30/747 (4%)
 Frame = -1

Query: 2628 PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 2494
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 2493 SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL---------SISNLGLPQQLVESLEKRG 2341
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 2340 ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 2161
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 2160 XXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 1981
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 1980 XXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1801
                    LGEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1800 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1621
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1620 RDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1441
            RDADEVS+ALT+ IASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1440 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1261
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1260 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRS 1081
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT          SGFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1080 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 901
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 900  DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 721
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 720  XXXXXXXSNR---DSDFEDGF---QXXXXXXXXXXXXXXXXRARGDDWLIXXXXXXXXXX 559
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI-GGSRSSRSS 741

Query: 558  XXXXXSGFGGACFNCGRSGHRASDCPD 478
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 742  SRDSSRSFGGACFNCGRSGHRASECPN 768


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|557525870|gb|ESR37176.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score =  904 bits (2337), Expect = 0.0
 Identities = 503/759 (66%), Positives = 546/759 (71%), Gaps = 42/759 (5%)
 Frame = -1

Query: 2628 PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 2494
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 2493 SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL---------SISNLGLPQQLVESLEKRG 2341
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 2340 ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 2161
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 2160 XXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 1981
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 1980 XXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1801
                    LGEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1800 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1621
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1620 RDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1441
            RDADEVS+ALT+ IASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1440 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1261
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1260 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRS 1081
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT          SGFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1080 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 901
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 900  DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDN---------------XXXXXX 766
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 765  XXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGF---QXXXXXXXXXXXXXXXXRARGDDW 595
                                   +  SD EDGF   +                 +  DDW
Sbjct: 683  GARGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDW 742

Query: 594  LIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPD 478
            LI                 FGGACFNCGRSGHRAS+CP+
Sbjct: 743  LI-GGSRSSRSSSRDSSRSFGGACFNCGRSGHRASECPN 780


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|567862566|ref|XP_006423937.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525869|gb|ESR37175.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525871|gb|ESR37177.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score =  904 bits (2337), Expect = 0.0
 Identities = 503/759 (66%), Positives = 546/759 (71%), Gaps = 42/759 (5%)
 Frame = -1

Query: 2628 PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 2494
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 2493 SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL---------SISNLGLPQQLVESLEKRG 2341
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 2340 ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 2161
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 2160 XXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 1981
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 1980 XXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1801
                    LGEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1800 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1621
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1620 RDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1441
            RDADEVS+ALT+ IASEALHGDISQHQRERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1440 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1261
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1260 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRS 1081
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT          SGFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1080 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 901
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 900  DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDN---------------XXXXXX 766
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 765  XXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGF---QXXXXXXXXXXXXXXXXRARGDDW 595
                                   +  SD EDGF   +                 +  DDW
Sbjct: 683  GARGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDW 742

Query: 594  LIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPD 478
            LI                 FGGACFNCGRSGHRAS+CP+
Sbjct: 743  LI--GGSRSSRSSSRDSRSFGGACFNCGRSGHRASECPN 779


>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337585|gb|ERP60031.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 774

 Score =  903 bits (2334), Expect = 0.0
 Identities = 488/692 (70%), Positives = 530/692 (76%), Gaps = 14/692 (2%)
 Frame = -1

Query: 2511 AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXLS-------------ISNLGLPQ 2371
            AIATPN +LSEEAFKGL GFS                               IS LGLPQ
Sbjct: 85   AIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQ 144

Query: 2370 QLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXX 2191
            +LV++L+ RGITHLFPIQRAVL+P LEG+D+IARAKTGTGKTLAFGIPIIKRLT D E  
Sbjct: 145  RLVQTLQNRGITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELR 204

Query: 2190 XXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDV 2011
                        LVLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNALSRGVDV
Sbjct: 205  GSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDV 264

Query: 2010 VVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSA 1831
            VVGTPGR           LGEV+YLVLDEADQML+ GFEEDVEVILE+LP KRQSMLFSA
Sbjct: 265  VVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSA 324

Query: 1830 TMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKG 1651
            TMP WVKKLARKYLDNPL IDLVGD++EKLAEGIKLYAI TTA+SKRTILSDLVTVYAKG
Sbjct: 325  TMPTWVKKLARKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATSKRTILSDLVTVYAKG 384

Query: 1650 GKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAA 1471
             KTI+FT+TKRDADEVSMALT SIASEALHGDISQHQRERTLN FR GKFTVLVATDVA+
Sbjct: 385  EKTIIFTRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 444

Query: 1470 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGC 1291
            RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVRSLERD GC
Sbjct: 445  RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGC 504

Query: 1290 QFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXS 1111
            +FEF+SPPAIE++LESS +QVV+TL GVHPESVEFF PTAQKLIEE+GT          S
Sbjct: 505  KFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFFTPTAQKLIEEQGTSALAAALAHLS 564

Query: 1110 GFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLI 931
            GFSRPPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVYPAAADE+GKI+LI
Sbjct: 565  GFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEIGKIHLI 624

Query: 930  ADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD-NXXXXXXXXXX 754
            ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLPALQDD PPSD            
Sbjct: 625  ADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGPPSDFYGRFSSRDRPA 684

Query: 753  XXXXXXXXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARGDDWLIXXXXX 574
                              S R SD E   +                R+ GDDWL+     
Sbjct: 685  RGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSNSNENTRSWMSRSSGDDWLV--GGR 742

Query: 573  XXXXXXXXXXSGFGGACFNCGRSGHRASDCPD 478
                        FGG+CFNCGRSGHRAS+CP+
Sbjct: 743  RSSRPSSRDSRSFGGSCFNCGRSGHRASECPN 774


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337584|gb|ERP60030.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score =  903 bits (2334), Expect = 0.0
 Identities = 488/692 (70%), Positives = 530/692 (76%), Gaps = 14/692 (2%)
 Frame = -1

Query: 2511 AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXLS-------------ISNLGLPQ 2371
            AIATPN +LSEEAFKGL GFS                               IS LGLPQ
Sbjct: 85   AIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQ 144

Query: 2370 QLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXX 2191
            +LV++L+ RGITHLFPIQRAVL+P LEG+D+IARAKTGTGKTLAFGIPIIKRLT D E  
Sbjct: 145  RLVQTLQNRGITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELR 204

Query: 2190 XXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDV 2011
                        LVLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNALSRGVDV
Sbjct: 205  GSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDV 264

Query: 2010 VVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSA 1831
            VVGTPGR           LGEV+YLVLDEADQML+ GFEEDVEVILE+LP KRQSMLFSA
Sbjct: 265  VVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSA 324

Query: 1830 TMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKG 1651
            TMP WVKKLARKYLDNPL IDLVGD++EKLAEGIKLYAI TTA+SKRTILSDLVTVYAKG
Sbjct: 325  TMPTWVKKLARKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATSKRTILSDLVTVYAKG 384

Query: 1650 GKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAA 1471
             KTI+FT+TKRDADEVSMALT SIASEALHGDISQHQRERTLN FR GKFTVLVATDVA+
Sbjct: 385  EKTIIFTRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 444

Query: 1470 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGC 1291
            RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVRSLERD GC
Sbjct: 445  RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGC 504

Query: 1290 QFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXS 1111
            +FEF+SPPAIE++LESS +QVV+TL GVHPESVEFF PTAQKLIEE+GT          S
Sbjct: 505  KFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFFTPTAQKLIEEQGTSALAAALAHLS 564

Query: 1110 GFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLI 931
            GFSRPPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVYPAAADE+GKI+LI
Sbjct: 565  GFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEIGKIHLI 624

Query: 930  ADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD-NXXXXXXXXXX 754
            ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLPALQDD PPSD            
Sbjct: 625  ADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGPPSDFYGRFSSRDRPA 684

Query: 753  XXXXXXXXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARGDDWLIXXXXX 574
                              S R SD E   +                R+ GDDWL+     
Sbjct: 685  RGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSNSNENTRSWMSRSSGDDWLV---GG 741

Query: 573  XXXXXXXXXXSGFGGACFNCGRSGHRASDCPD 478
                        FGG+CFNCGRSGHRAS+CP+
Sbjct: 742  RRSSRPSSRDRSFGGSCFNCGRSGHRASECPN 773


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  897 bits (2319), Expect = 0.0
 Identities = 481/694 (69%), Positives = 529/694 (76%), Gaps = 12/694 (1%)
 Frame = -1

Query: 2511 AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL----------SISNLGLPQQLV 2362
            AIATPNSVLSEEAFKGLGG SK               +          +I NLGL ++LV
Sbjct: 80   AIATPNSVLSEEAFKGLGGLSKGRGFKDDGEDDYELEVGSEASNEENLAIGNLGLREELV 139

Query: 2361 ESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXX 2182
            ++L KRGITHLFPIQRAVL+PALEG+DII RAKTGTGKTLAF IPIIKRL  DDE     
Sbjct: 140  DALAKRGITHLFPIQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRL--DDEGRSPS 197

Query: 2181 XXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVG 2002
                      VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNAL+RGVDVVVG
Sbjct: 198  RGRLPRVL--VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNIQQNALTRGVDVVVG 255

Query: 2001 TPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMP 1822
            TPGR           LGEVQYLVLDEADQMLAVGFEEDVEVILE LP  RQSMLFSATMP
Sbjct: 256  TPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPTGRQSMLFSATMP 315

Query: 1821 GWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKT 1642
            GWVKKLARKYLDNP+TIDLVGDQ+EKLAEGIKLYAIPTTA++KRTIL DL+TVYAKGGKT
Sbjct: 316  GWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATTKRTILGDLITVYAKGGKT 375

Query: 1641 IVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGL 1462
            IVFTQTKRDADEVS+ALT+SI SEALHGDISQHQRERTLN FR GKFTVLVATDVAARGL
Sbjct: 376  IVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 435

Query: 1461 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFE 1282
            DIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT SQRRT++SLERDVGC FE
Sbjct: 436  DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTGSQRRTIKSLERDVGCSFE 495

Query: 1281 FISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFS 1102
            FISPP +E+VLESSA+QVV+TLKGVHPES++FF+P AQ++IEE+GT          SGFS
Sbjct: 496  FISPPQMEEVLESSAEQVVATLKGVHPESIQFFLPAAQRMIEEQGTDALAAALAHLSGFS 555

Query: 1101 RPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADE 922
            +PPSSRSL++HEQGW TLQ+TR+  +SRG+LSARSVTGFLSD+YPAAADEVGKI+LIADE
Sbjct: 556  QPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSARSVTGFLSDIYPAAADEVGKIHLIADE 615

Query: 921  KVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXX 742
            +VQGAVFDLPE+IAKELL KQ PPGNTI KITKLP LQDD P  DN              
Sbjct: 616  RVQGAVFDLPEEIAKELLTKQTPPGNTISKITKLPPLQDDGPSGDNYGRFPSRDRGGRGG 675

Query: 741  XXXXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARGDD--WLIXXXXXXX 568
                           + DSD ED F+                    DD  WLI       
Sbjct: 676  LRDRGGFRGSRNWGRS-DSDDEDQFRRGGRNFRGGSSQSRNSWRSNDDDDWLIGNRRSNR 734

Query: 567  XXXXXXXXSGFGGACFNCGRSGHRASDCPDKQDY 466
                      FGGACF CGR+GHRA+DCP KQD+
Sbjct: 735  SSSFGSRDRSFGGACFVCGRAGHRAADCPSKQDF 768


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  897 bits (2319), Expect = 0.0
 Identities = 491/721 (68%), Positives = 535/721 (74%), Gaps = 33/721 (4%)
 Frame = -1

Query: 2529 SVFVSHAIATPNSVLSEEAFKGLGG---------------FSKXXXXXXXXXXXXXXXLS 2395
            S FV+ AIA PNS+LSEEAFKGLGG                                 L+
Sbjct: 62   SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYEDDGAGESLPDDDELA 121

Query: 2394 ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKR 2215
            IS LGLPQ+LVESLEKRGITHLFPIQRAVL+PALEG+D+IARAKTGTGKTLAFGIPIIK 
Sbjct: 122  ISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKC 181

Query: 2214 LTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQN 2035
            +T DD+               VLAPTRELA+QVEKEI ESAPYL+TVCVYGGVSYI Q+N
Sbjct: 182  ITEDDKSSQRRTGRLPRVL--VLAPTRELAKQVEKEINESAPYLSTVCVYGGVSYITQRN 239

Query: 2034 ALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPK 1855
            ALSRGVDVVVGTPGR           LGEV+YLVLDEADQML+ GFEEDVEVILE LP K
Sbjct: 240  ALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSK 299

Query: 1854 RQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSD 1675
            RQSMLFSATMP WVKKLARKYLDNPL IDLVGDQ+EKLAEGIKLYAI T A+SKR+ILSD
Sbjct: 300  RQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATSKRSILSD 359

Query: 1674 LVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTV 1495
            LVTVYAKGGKTI+FTQTKRDADEVSM LTNSIASEALHGDISQHQRERTLN FR GKFTV
Sbjct: 360  LVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 419

Query: 1494 LVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVR 1315
            LVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+A+LMFTSSQRRTV+
Sbjct: 420  LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVK 479

Query: 1314 SLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXX 1135
            SLERDVGC+FEF+SPP  E+VLESSA+QV++TL GVHPESV FF PTAQ+LIEE+GT   
Sbjct: 480  SLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIEEQGTSAL 539

Query: 1134 XXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAAD 955
                   SGFS+PPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVY AAAD
Sbjct: 540  AAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSDVYTAAAD 599

Query: 954  EVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD---N 784
            EVGKI++IADEKVQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLP+LQDD PPSD    
Sbjct: 600  EVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITKLPSLQDDGPPSDFYGR 659

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARG 604
                                          R+SD +D                   R+  
Sbjct: 660  FSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDD--------DTFRRGGRSFSRSSS 711

Query: 603  DDWLI---------------XXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPDKQD 469
            DDWLI                                FGG+CFNCGRSGHRASDCP+K D
Sbjct: 712  DDWLIGGGRSSRPSPRGRSSPRDWSSPRDRSSPRDRSFGGSCFNCGRSGHRASDCPNKLD 771

Query: 468  Y 466
            +
Sbjct: 772  F 772


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Cucumis sativus]
          Length = 748

 Score =  896 bits (2315), Expect = 0.0
 Identities = 481/700 (68%), Positives = 531/700 (75%), Gaps = 9/700 (1%)
 Frame = -1

Query: 2547 SSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXLS--------- 2395
            SSR   S F S AIATPNS+LSEEAF+   GFS+               L+         
Sbjct: 54   SSRRNLSGFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELA 113

Query: 2394 ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKR 2215
            IS L LPQ+L ++L+KRGITHLFPIQRAVL+PALEG+D+IARAKTGTGKTLAFGIPI+K+
Sbjct: 114  ISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKK 173

Query: 2214 LTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQN 2035
            LT DDE               VL PTRELA+QVEKEIKESAPYLNTVCVYGGVSYI QQN
Sbjct: 174  LTEDDESRSLRRRSRLPRVL-VLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQN 232

Query: 2034 ALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPK 1855
            ALSRGVDVVVGTPGR           LGEV+YLVLDEADQMLAVGFEEDVEVILE LP +
Sbjct: 233  ALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQ 292

Query: 1854 RQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSD 1675
            RQ+MLFSATMP WVKKLARKYLDNPLTIDLVGDQDEKLAEGIKL+AI TTA+SK+TIL D
Sbjct: 293  RQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRD 352

Query: 1674 LVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTV 1495
            LVTVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQHQRERTLN FR GKFTV
Sbjct: 353  LVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTV 412

Query: 1494 LVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVR 1315
            LVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVR
Sbjct: 413  LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVR 472

Query: 1314 SLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXX 1135
            SLERDVGC+FEF +PP +E+VL+SSA+QVV TL+GVHPES+E+F PTAQKLI+E+G    
Sbjct: 473  SLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGAL 532

Query: 1134 XXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAAD 955
                   SGF+ PPSSRSLI+HEQGW TLQ+TRD  YSRG+LSARSVTGFLSDVY  AAD
Sbjct: 533  AAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAAD 592

Query: 954  EVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXX 775
            E+GKI+LIADE++ GAVFDLPE+IAKELLNK++P GNTI KITKLP LQDD PPSDN   
Sbjct: 593  EIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGR 652

Query: 774  XXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARGDDW 595
                                     S+RDSD                      R+ GDDW
Sbjct: 653  FSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDW 712

Query: 594  LIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPDK 475
            LI                 FGG+CFNCGR GHRAS+CPDK
Sbjct: 713  LIGGRRSSRSSSVDR----FGGSCFNCGRMGHRASECPDK 748


>ref|XP_007031306.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]
            gi|508719911|gb|EOY11808.1| DEAD box RNA helicase isoform
            1 [Theobroma cacao]
          Length = 742

 Score =  890 bits (2300), Expect = 0.0
 Identities = 485/690 (70%), Positives = 525/690 (76%), Gaps = 4/690 (0%)
 Frame = -1

Query: 2523 FVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXLS---ISNLGLPQQLVESL 2353
            FV  A+ATPNSVLSE+AFKGL                         IS LGLPQ+LV+SL
Sbjct: 64   FVPRAVATPNSVLSEQAFKGLSLHQDQDGQDVYEAAASSNHDDELDISKLGLPQRLVDSL 123

Query: 2352 EKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVD-DEXXXXXXX 2176
             +RGITHLFPIQRAV +PAL+G+DIIARAKTGTGKTLAFGIPIIKRLT D  +       
Sbjct: 124  LQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRRM 183

Query: 2175 XXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTP 1996
                   LVLAPTRELA+QVEKEIKESAPYLNTVCVYGGVSY  Q+NALSRGVDVVVGTP
Sbjct: 184  SGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGTP 243

Query: 1995 GRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGW 1816
            GR           LGEV+YLVLDEADQMLAVGFEEDVE ILE LP KRQSMLFSATMP W
Sbjct: 244  GRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPSW 303

Query: 1815 VKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIV 1636
            VKKLARKYLDNPL IDLVGDQDEKLAEGIKLYAI TT+++KRTILSDL+TVYAKGGKTIV
Sbjct: 304  VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAISTTSTAKRTILSDLITVYAKGGKTIV 363

Query: 1635 FTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDVAARGLDI 1456
            FTQTKRDAD+VS+ALTNSIASEALHGDISQHQRERTLN FR GKFTVLVATDVA+RGLDI
Sbjct: 364  FTQTKRDADDVSIALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDI 423

Query: 1455 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFI 1276
            PNV+LVIHYELPND ETFVHRSGRTGRAGKEGSAILMFT+SQRRTVRSLERDVGC+FEFI
Sbjct: 424  PNVELVIHYELPNDAETFVHRSGRTGRAGKEGSAILMFTNSQRRTVRSLERDVGCKFEFI 483

Query: 1275 SPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRP 1096
            S PAIE+VLESSA+Q+V+TL GVHP S+EFF PTAQ+LIEE+G           SGFSRP
Sbjct: 484  SAPAIEEVLESSAEQIVATLNGVHPHSIEFFTPTAQRLIEEEGINALAAALAHLSGFSRP 543

Query: 1095 PSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKV 916
            PSSRSLISHEQG  TLQ+TRDS YSRG+LSARSVTGFLSDVYP AADEVGK+YLIADE+V
Sbjct: 544  PSSRSLISHEQGLVTLQLTRDSSYSRGFLSARSVTGFLSDVYPVAADEVGKVYLIADERV 603

Query: 915  QGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXX 736
            QGAVFDLPE+IAKELLNKQ PPGNTI KITKLP LQDD P SD                 
Sbjct: 604  QGAVFDLPEEIAKELLNKQTPPGNTISKITKLPPLQDDGPSSDYYGKFSSRDRSPRGISK 663

Query: 735  XXXXXXXXXXXXSNRDSDFEDGFQXXXXXXXXXXXXXXXXRARGDDWLIXXXXXXXXXXX 556
                        S R+SD E                    ++  DDWLI           
Sbjct: 664  DRRGFRGSRSWSSGRNSDDE--------VRGGRSSWSRTSKSSRDDWLI---GSRRSKRS 712

Query: 555  XXXXSGFGGACFNCGRSGHRASDCPDKQDY 466
                  FGG+CFNCGR GHRASDCP+K D+
Sbjct: 713  SSHDRSFGGSCFNCGRPGHRASDCPEKLDF 742


>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 772

 Score =  889 bits (2298), Expect = 0.0
 Identities = 481/711 (67%), Positives = 533/711 (74%), Gaps = 24/711 (3%)
 Frame = -1

Query: 2532 RSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXL----------SISNL 2383
            RSVF + AIATPNSVLSEEAFKGLGGFSK                          ++S L
Sbjct: 63   RSVFATQAIATPNSVLSEEAFKGLGGFSKEELDSESEYESESEVAEPAVGSKDELALSKL 122

Query: 2382 GLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVD 2203
            GLPQ+LV+SLE+RGI+ LFPIQRAVL+PALEG+DIIARAKTGTGKTLAFGIPI+KRLT D
Sbjct: 123  GLPQRLVDSLERRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLTED 182

Query: 2202 DEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSR 2023
            DE               VLAPTRELA+QVEKEIKESAPYLNTVCVYGGVSY+ QQ+ALSR
Sbjct: 183  DEQRGSRRSGYLPRVL-VLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSALSR 241

Query: 2022 GVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSM 1843
            GVDVVVGTPGR           L EVQYLVLDEADQMLAVGFE+DVE IL+ LP +RQSM
Sbjct: 242  GVDVVVGTPGRLIDLINGGSLKLSEVQYLVLDEADQMLAVGFEDDVETILQRLPAQRQSM 301

Query: 1842 LFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTV 1663
            LFSATMP WVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYA+ TT SSKRTILSDL+TV
Sbjct: 302  LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYALSTTNSSKRTILSDLITV 361

Query: 1662 YAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVAT 1483
            YAKGGKTIVFTQTKRDADEVSM+LT SIASEALHGDISQHQRERTLN FR GKFTVLVAT
Sbjct: 362  YAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 421

Query: 1482 DVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLER 1303
            DVA+RGLDIPNVDL+IHYELPND ETFVHRSGRTGRAGK G+A+LMFT++QRRTV++LER
Sbjct: 422  DVASRGLDIPNVDLIIHYELPNDSETFVHRSGRTGRAGKLGNAVLMFTNNQRRTVKTLER 481

Query: 1302 DVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXX 1123
            DVGC+FEF++PP +E+VLESSA  VV+TL GVHPES++FF PTAQKLIEE+GT       
Sbjct: 482  DVGCRFEFVTPPTVEEVLESSASHVVATLNGVHPESIKFFTPTAQKLIEEQGTTALAAAL 541

Query: 1122 XXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGK 943
               SGFSRPPSSRSLISHE GWTTLQ+ RD +++RGYLSARSVTGFLSDVY AAADEVGK
Sbjct: 542  AQLSGFSRPPSSRSLISHEPGWTTLQIIRDPEFARGYLSARSVTGFLSDVYSAAADEVGK 601

Query: 942  IYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXX 763
            IYLIADE+VQGAVFDLPE+IAKELL +Q+PPGN+I KI+KLP LQDD P SDN       
Sbjct: 602  IYLIADERVQGAVFDLPEEIAKELLKRQMPPGNSISKISKLPPLQDDGPVSDNYGRFSAR 661

Query: 762  XXXXXXXXXXXXXXXXXXXXXSNRDS--------DFEDG------FQXXXXXXXXXXXXX 625
                                     S        DF DG       +             
Sbjct: 662  DRSSRRGGFSGGRGGGGGRGGFRSSSRGGWGGGRDFSDGDDDFRSSRGSFNRSSSSSSRP 721

Query: 624  XXXRARGDDWLIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPDKQ 472
               R+  DDWLI                 FGG+CFNCG+SGHRAS+CP K+
Sbjct: 722  RMTRSMDDDWLI---GGTRTGRIPSRDRSFGGSCFNCGQSGHRASECPSKK 769


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum tuberosum]
          Length = 744

 Score =  889 bits (2296), Expect = 0.0
 Identities = 483/726 (66%), Positives = 546/726 (75%), Gaps = 13/726 (1%)
 Frame = -1

Query: 2604 PLSL-LPGDKSHFGDKFPLRSSRPQRSVFVSHAIATPNS-VLSEEAFKGLGGFSKXXXXX 2431
            PLSL    +KS+F     LR  RP    F++ A+ TPNS VLSEEAFKG+GGF K     
Sbjct: 31   PLSLPFSTEKSNFHVHVRLR--RP----FLASAVVTPNSSVLSEEAFKGIGGFGKDSLNV 84

Query: 2430 XXXXXXXXXXL----------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQD 2281
                      +          ++S LGLP +LVE+LEKRGIT LFPIQRAVL+PALEG+D
Sbjct: 85   SESEYDSEDEVEDNESNEDELAVSKLGLPHRLVEALEKRGITQLFPIQRAVLVPALEGRD 144

Query: 2280 IIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIK 2101
            IIARAKTGTGKTLAFGIP++K+L+ D+E               VLAPTRELA QVEKE+K
Sbjct: 145  IIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRGRLPKIL-VLAPTRELANQVEKEMK 203

Query: 2100 ESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEA 1921
            ESAPYLNTVC+YGGVSY  QQNALSRGVDVVVGTPGR           LGEV+YLVLDEA
Sbjct: 204  ESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEA 263

Query: 1920 DQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKL 1741
            DQMLAVGFEEDVEVILE LPP+RQSMLFSATMPGWVKKL+RKYL+NPLTIDLVGDQDEKL
Sbjct: 264  DQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKL 323

Query: 1740 AEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALH 1561
            AEGIKLYA+  T++SKR+IL DLVTVYAKGGKTIVFTQTKRDADEVSMAL+NSI+SEALH
Sbjct: 324  AEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALH 383

Query: 1560 GDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1381
            GDISQHQRERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 384  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 443

Query: 1380 GRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHP 1201
            GRAGKEG AILM+T SQRRTVRSLERDVGC+FEF+SPP++++VLESSA+ VV+ L GVHP
Sbjct: 444  GRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALTGVHP 503

Query: 1200 ESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYS 1021
            ESVE+FIPTAQ+L+E++G            GFS+PPSSRSLI+HEQGWTTLQ+TRDS+ S
Sbjct: 504  ESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSENS 563

Query: 1020 RGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNT 841
            RG+LSARSVTGFLSDVY  AADE+GKI+LIADE+VQGA+FDLPE+IA +LLN+++PPGNT
Sbjct: 564  RGFLSARSVTGFLSDVYSPAADEIGKIHLIADERVQGAIFDLPEEIAADLLNQELPPGNT 623

Query: 840  ICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGFQX 661
            I KITKLPALQDD P  D                             S R SD +D    
Sbjct: 624  ISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGFRDRRGRYSQGSSSGRFSDNDD---- 679

Query: 660  XXXXXXXXXXXXXXXRARGDDWLI-XXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDC 484
                           R  G DWLI                  FGGACFNCGRSGHRAS+C
Sbjct: 680  -DNWGNDSRSRGGRTRRGGSDWLISGDRRSSRSLSGGSRDRSFGGACFNCGRSGHRASEC 738

Query: 483  PDKQDY 466
            P+K+DY
Sbjct: 739  PNKRDY 744


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum lycopersicum]
          Length = 746

 Score =  884 bits (2284), Expect = 0.0
 Identities = 482/728 (66%), Positives = 545/728 (74%), Gaps = 15/728 (2%)
 Frame = -1

Query: 2604 PLSL-LPGDKSHFGDKFPLRSSRPQRSVFVSHAIATP-NSVLSEEAFKGLGGFSKXXXXX 2431
            PLSL    +KS+F     LR  RP    F++ A+ TP +SVLSEEAFKG+GGF K     
Sbjct: 31   PLSLPFSIEKSNFHVHVRLR--RP----FLASAVVTPTSSVLSEEAFKGIGGFGKDSLNV 84

Query: 2430 XXXXXXXXXXL----------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQD 2281
                      +          S+S LGLP +LV++LEKRGIT LFPIQRAVL+PALEG+D
Sbjct: 85   SESEYDSEDEVEDNESNEDELSVSKLGLPHRLVDALEKRGITQLFPIQRAVLVPALEGRD 144

Query: 2280 IIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELARQVEKEIK 2101
            IIARAKTGTGKTLAFGIP++K+L+ D+E               VLAPTRELA QVEKE+K
Sbjct: 145  IIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRGRLPKVL-VLAPTRELANQVEKEMK 203

Query: 2100 ESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEA 1921
            ESAPYLNTVC+YGGVSY  QQNALSRGVDVVVGTPGR           LGEV+YLVLDEA
Sbjct: 204  ESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEA 263

Query: 1920 DQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKL 1741
            DQMLAVGFEEDVEVILE LPP+RQSMLFSATMPGWVKKL+RKYL+NPLTIDLVGDQDEKL
Sbjct: 264  DQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKL 323

Query: 1740 AEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALH 1561
            AEGIKLYA+  T++SKR+IL DLVTVYAKGGKTIVFTQTKRDADEVSMAL+NSI+SEALH
Sbjct: 324  AEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALH 383

Query: 1560 GDISQHQRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1381
            GDISQHQRERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 384  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 443

Query: 1380 GRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHP 1201
            GRAGKEG AILM+T SQRRTVRSLERDVGC+FEF+SPP++++VLESSA+ VV+ L GVHP
Sbjct: 444  GRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALNGVHP 503

Query: 1200 ESVEFFIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYS 1021
            ESVE+FIPTAQ+L+E++G            GFS+PPSSRSLI+HEQGWTTLQ+TRDS+ S
Sbjct: 504  ESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSETS 563

Query: 1020 RGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNT 841
            RG+LSARSVTGFLSDVY  AADEVGKI+LIADE+VQGA+FDLPE+ A +LLN+++PPGNT
Sbjct: 564  RGFLSARSVTGFLSDVYSPAADEVGKIHLIADERVQGAIFDLPEETAADLLNQELPPGNT 623

Query: 840  ICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFEDGFQX 661
            I KITKLPALQDD P  D                             S R SD +D    
Sbjct: 624  ISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGLRDRRGRYSQGSSSGRYSDNDD---- 679

Query: 660  XXXXXXXXXXXXXXXRARGDDWLI---XXXXXXXXXXXXXXXSGFGGACFNCGRSGHRAS 490
                           R  G DWLI                    FGGACFNCGRSGHRAS
Sbjct: 680  -DNWGNDSRSRGGRTRRGGSDWLISGDRDKRSSRSFSGGSRDRSFGGACFNCGRSGHRAS 738

Query: 489  DCPDKQDY 466
            +CP+K+DY
Sbjct: 739  ECPNKRDY 746


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  879 bits (2270), Expect = 0.0
 Identities = 489/673 (72%), Positives = 520/673 (77%), Gaps = 68/673 (10%)
 Frame = -1

Query: 2601 LSLLPGDKSHFGD-KFP---------LRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGF 2452
            LSL   DK+H G  K P         LR S  Q   FV  AIATPNSVLSEEAFKGLGGF
Sbjct: 28   LSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGF 87

Query: 2451 SKXXXXXXXXXXXXXXXL-----------SISNLGLPQQLVESLEKRGITHLFPIQRAVL 2305
            SK               +           +++ LGLP +LVESLE+RGITHLFPIQRAVL
Sbjct: 88   SKDPLDVTDTDDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVL 147

Query: 2304 LPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXLVLAPTRELA 2125
            +PALEG+D+IARAKTGTGKTLAFGIPIIKRL+ DDE              LVLAPTRELA
Sbjct: 148  VPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELA 207

Query: 2124 RQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXLGEV 1945
            +QVEKEIKESAPYL+TVCVYGGVSYI QQNALSRGVDVVVGTPGR           LGEV
Sbjct: 208  KQVEKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEV 267

Query: 1944 QYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDL 1765
            Q LVLDEADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDL
Sbjct: 268  QNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDL 327

Query: 1764 -----------------------VGDQDEKLAEGIKLYAIPTTASSKRTILSDLVT---- 1666
                                   VGD DEKLAEGIKLYAIPTTA+SKRTILSDL+T    
Sbjct: 328  GNFCPHWGLNLEPPKNPPQTLDHVGDHDEKLAEGIKLYAIPTTATSKRTILSDLITKNIV 387

Query: 1665 -----------VYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNS 1519
                       VYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLN 
Sbjct: 388  KDRGGFQYGHKVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNG 447

Query: 1518 FRMGKFTVLVATDVAARGLDIPNVDL---------VIHYELPNDPETFVHRSGRTGRAGK 1366
            FR GKFTVLVATDVAARGLDIPNVDL         +IHYELPNDPETFVHRSGRTGRAGK
Sbjct: 448  FRQGKFTVLVATDVAARGLDIPNVDLKYVDLLFLQIIHYELPNDPETFVHRSGRTGRAGK 507

Query: 1365 EGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEF 1186
            EG+AILMFTSSQRRTV+SLERDVGC+FEFISPPAIE+VLESSA+QVV+TL GVHPESVEF
Sbjct: 508  EGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEF 567

Query: 1185 FIPTAQKLIEEKGTXXXXXXXXXXSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLS 1006
            F PTAQKLIEEKGT          SGFS+PPS RSLISHEQGW TLQ+TRDS YSRG+LS
Sbjct: 568  FTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLS 627

Query: 1005 ARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKIT 826
            ARSVTGFLSDVYP AADE+GKIYL+ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KIT
Sbjct: 628  ARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKIT 687

Query: 825  KLPALQDDRPPSD 787
            KLPALQDD P  D
Sbjct: 688  KLPALQDDGPAGD 700


>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 771

 Score =  877 bits (2267), Expect = 0.0
 Identities = 488/710 (68%), Positives = 533/710 (75%), Gaps = 22/710 (3%)
 Frame = -1

Query: 2541 RPQRSVFVSHAIATPNS-VLSEEAFKGLGG----FSKXXXXXXXXXXXXXXXLSISNLGL 2377
            +P  + FV  A+ATPNS +LSEEAFKGLG     F                 L IS L L
Sbjct: 59   KPTPTTFVPSAVATPNSSLLSEEAFKGLGRDFDEFDHASDSDSAAESVHPDELDISKLDL 118

Query: 2376 PQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDE 2197
            P +LVESL+ RGIT LFPIQRAVL+PALEG+DIIARAKTGTGKTLAFGIPIIK LT +DE
Sbjct: 119  PSRLVESLQSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLT-EDE 177

Query: 2196 XXXXXXXXXXXXXXLVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGV 2017
                          LVLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY+ QQ ALSRGV
Sbjct: 178  HAPSHRRSGRLPRFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQGALSRGV 237

Query: 2016 DVVVGTPGRXXXXXXXXXXXLGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLF 1837
            DVVVGTPGR           L EVQYLVLDEADQMLAVGFEEDVE+ILE LP +RQSMLF
Sbjct: 238  DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPAQRQSMLF 297

Query: 1836 SATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYA 1657
            SATMP WVKKLARKYL+NPLTIDLVGD++EKLAEGIKLYAI  TA+SKRTILSDLVTVYA
Sbjct: 298  SATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRTILSDLVTVYA 357

Query: 1656 KGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNSFRMGKFTVLVATDV 1477
            KGGKTIVFTQTKRDADEVS++LTNSI SEALHGDISQHQRERTLN FR GKFTVLVATDV
Sbjct: 358  KGGKTIVFTQTKRDADEVSLSLTNSIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDV 417

Query: 1476 AARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDV 1297
            AARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK+G+AIL++TSSQRRTVRSLERDV
Sbjct: 418  AARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQRRTVRSLERDV 477

Query: 1296 GCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXX 1117
            GC+FEF+S PA+E+VLESSA+QVV+TL GVHPESV+FF PTAQ+LIEE+GT         
Sbjct: 478  GCKFEFVSAPAMEEVLESSAEQVVATLGGVHPESVQFFTPTAQRLIEEQGTSALAAALAQ 537

Query: 1116 XSGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIY 937
             SGFSRPPSSRSLI+HEQGW TLQ+TRDSD SR Y SARS+TGFLSDVYPAAADEVGKI+
Sbjct: 538  LSGFSRPPSSRSLITHEQGWITLQLTRDSD-SRRYFSARSITGFLSDVYPAAADEVGKIH 596

Query: 936  LIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD--------NX 781
            LIADEKVQGAVFDLPE+IAKELLN+ IPPGNT+ KITKLP+LQDD PPSD        + 
Sbjct: 597  LIADEKVQGAVFDLPEEIAKELLNRDIPPGNTVSKITKLPSLQDDGPPSDFYGRFSDRDR 656

Query: 780  XXXXXXXXXXXXXXXXXXXXXXXXXXXSNRDSDFED-----GFQXXXXXXXXXXXXXXXX 616
                                       S+R  D ED     G Q                
Sbjct: 657  SSRRGSTSRGGFSSRGGSASRDRRGFKSSRGWDVEDSGDDFGDQSSRRGGRNFKTGNSWS 716

Query: 615  RARG----DDWLIXXXXXXXXXXXXXXXSGFGGACFNCGRSGHRASDCPD 478
            RA G    DDWLI                 FGG CFNCG SGHRASDCP+
Sbjct: 717  RAAGKSSGDDWLIGGGRRSSRPSSSDR---FGGTCFNCGESGHRASDCPN 763