BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00000107
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
emb|CBI28142.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citr...    98   1e-18
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|NP_174428.1| pentatricopeptide repeat-containing protein [Ar...    87   3e-15
ref|XP_002891146.1| pentatricopeptide repeat-containing protein ...    86   7e-15
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...    85   1e-14
ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Popu...    84   2e-14
gb|ABD96949.1| hypothetical protein [Cleome spinosa]                   84   2e-14
ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Caps...    80   4e-13
ref|XP_006415328.1| hypothetical protein EUTSA_v10007222mg [Eutr...    79   5e-13
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun...    78   1e-12
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...    78   1e-12
emb|CBI31865.3| unnamed protein product [Vitis vinifera]               78   1e-12
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]      77   2e-12

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA++ RW DV KVRRKMKD+G+KKVPGCS++EVNGIVHEF+VGD SH +  EIYS+L+ +
Sbjct: 581 YASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 640

Query: 141 AGMILDLEEN 112
           A  +L L+EN
Sbjct: 641 AKPLLGLDEN 650


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA++ RW DV KVRRKMKD+G+KKVPGCS++EVNGIVHEF+VGD SH +  EIYS+L+ +
Sbjct: 490 YASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 549

Query: 141 AGMILDLEEN 112
           A  +L L+EN
Sbjct: 550 AKPLLGLDEN 559


>ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Citrus sinensis]
          Length = 663

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 42/70 (60%), Positives = 60/70 (85%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+++RW DV  VR+KMK++G++KVPGCS+IE+NGI+HEF+VGD SHS+  EIYS+L+ M
Sbjct: 581 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 640

Query: 141 AGMILDLEEN 112
           A  +LD ++N
Sbjct: 641 AKTLLDSKQN 650


>ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citrus clementina]
           gi|557554247|gb|ESR64261.1| hypothetical protein
           CICLE_v10007671mg [Citrus clementina]
          Length = 663

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 42/70 (60%), Positives = 60/70 (85%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+++RW DV  VR+KMK++G++KVPGCS+IE+NGI+HEF+VGD SHS+  EIYS+L+ M
Sbjct: 581 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 640

Query: 141 AGMILDLEEN 112
           A  +LD ++N
Sbjct: 641 AKTLLDSKQN 650


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 43/70 (61%), Positives = 56/70 (80%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+  RW D  KVRRKMK++G+KK+PGCS IEV+GIVHEF+VGD SH + IEI S+LN +
Sbjct: 646 YASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRV 705

Query: 141 AGMILDLEEN 112
            G +L L+E+
Sbjct: 706 TGQLLGLKES 715


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/70 (60%), Positives = 56/70 (80%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+  RW D  KVRRKMK++G+KK+PGCS IEV+GIVHEF+VGD SH + +EI S+LN +
Sbjct: 692 YASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRV 751

Query: 141 AGMILDLEEN 112
            G +L L+E+
Sbjct: 752 TGQLLGLKES 761


>ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Fragaria vesca subsp. vesca]
          Length = 633

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 37/72 (51%), Positives = 58/72 (80%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA + RW DV KVRR+M+D+G+KK+PGCS++E+NG++HEF+V D+SHS+  +I S+L+ +
Sbjct: 553 YADAERWEDVTKVRRRMRDLGVKKMPGCSSVEINGVIHEFLVSDSSHSQMEQIDSMLHRL 612

Query: 141 AGMILDLEENVK 106
              +L L+EN +
Sbjct: 613 KNPVLLLDENYR 624


>ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31430 gi|12322531|gb|AAG51260.1|AC027135_1
           PPR-repeat protein [Arabidopsis thaliana]
           gi|332193234|gb|AEE31355.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 570

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGD--TSHSKAIEIYSLLN 148
           YA+++RW DV  VRRKMKD+GI+K PGCS+IE++G+ HEFIVGD   SH K  EI S+L+
Sbjct: 495 YASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLH 554

Query: 147 DMAGMILDLE 118
               ++LDLE
Sbjct: 555 QTTNLMLDLE 564


>ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336988|gb|EFH67405.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 554

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGD--TSHSKAIEIYSLLN 148
           YA+++RW DV  VRRKMKD+GI+K PGCS+IEV+G+ HEFIVG+  +SH K  EI S+L+
Sbjct: 479 YASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHEFIVGNDPSSHPKMDEINSMLH 538

Query: 147 DMAGMILDLE 118
               ++LDLE
Sbjct: 539 QTTHLMLDLE 548


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/70 (57%), Positives = 50/70 (71%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA + RW DV KVRRKMKD+G+KK PGCS+IEV+ I+HEF  G  SH +  EIY +LN M
Sbjct: 586 YAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIM 645

Query: 141 AGMILDLEEN 112
           A  +L   +N
Sbjct: 646 AKPLLGSAKN 655


>ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Populus trichocarpa]
           gi|550342748|gb|ERP63415.1| hypothetical protein
           POPTR_0003s08690g [Populus trichocarpa]
          Length = 609

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 52/60 (86%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA++ RW DV +VRR+MKD+G+KKVPGCS+IEV+GIVHEF+VG+ S S+  EIYS+L+ M
Sbjct: 537 YASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYSMLDRM 596


>gb|ABD96949.1| hypothetical protein [Cleome spinosa]
          Length = 639

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/68 (54%), Positives = 53/68 (77%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+++RW DV  VRRKMK++GI+K PGCS+IEVNG++HEF+VG  SH +  +I+S+L  +
Sbjct: 563 YASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQV 622

Query: 141 AGMILDLE 118
              +L LE
Sbjct: 623 TKWMLGLE 630


>ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Capsella rubella]
           gi|482573642|gb|EOA37829.1| hypothetical protein
           CARUB_v10011411mg [Capsella rubella]
          Length = 570

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/70 (51%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGD--TSHSKAIEIYSLLN 148
           YA+++RW DV  VRRKMKD+GI+K PGCS++E+ G+ HEFIVGD  +SH    EI S+L+
Sbjct: 495 YASANRWEDVTNVRRKMKDMGIRKFPGCSSVEIEGVSHEFIVGDDPSSHPNMNEINSMLH 554

Query: 147 DMAGMILDLE 118
               +++ L+
Sbjct: 555 QTTNLMVGLQ 564


>ref|XP_006415328.1| hypothetical protein EUTSA_v10007222mg [Eutrema salsugineum]
           gi|557093099|gb|ESQ33681.1| hypothetical protein
           EUTSA_v10007222mg [Eutrema salsugineum]
          Length = 569

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGD-TSHSKAIEIYSLLND 145
           YA+++RW DV  VRR+MKD+GI+K PGCS++EV+GI HEF+VGD   H K  EI SLL+ 
Sbjct: 495 YASANRWEDVAIVRREMKDLGIRKFPGCSSVEVDGIPHEFVVGDPLCHPKMDEINSLLHQ 554

Query: 144 MAGMILDLE 118
               +L LE
Sbjct: 555 TKNWMLGLE 563


>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
           gi|462402068|gb|EMJ07625.1| hypothetical protein
           PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA + +W +V  +R+ M+D GIKK PGCS+IEVNG VHEF+VGD SH    EIYS L++M
Sbjct: 578 YAETGKWDEVSGLRKHMRDAGIKKEPGCSSIEVNGSVHEFLVGDNSHPLCKEIYSKLDEM 637

Query: 141 A 139
           A
Sbjct: 638 A 638


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 801

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/66 (51%), Positives = 49/66 (74%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA+++RWGDV  +RR MKD GI K PG S+IEVNG++HEFI+GD  H  A ++Y ++++M
Sbjct: 642 YASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEM 701

Query: 141 AGMILD 124
              + D
Sbjct: 702 REKLED 707


>ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 47/64 (73%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA + RW DV +VRR MKD GI+K PG S IEV+G  HEF+VGDT+HS+  +I+ LLN +
Sbjct: 518 YATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNIL 577

Query: 141 AGMI 130
           A  +
Sbjct: 578 ANQV 581


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
           gi|568855070|ref|XP_006481133.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like [Citrus sinensis]
           gi|557531571|gb|ESR42754.1| hypothetical protein
           CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 33/61 (54%), Positives = 47/61 (77%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           Y+ASH+W D  K+R  M D GI+K+ GCS +EV+G+VHEF+VGD SH  + +IYS L+++
Sbjct: 529 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 588

Query: 141 A 139
           A
Sbjct: 589 A 589


>emb|CBI31865.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLNDM 142
           YA + RW DV +VRR MKD GI+K PG S IEV+G  HEF+VGDT+HS+  +I+ LLN +
Sbjct: 473 YATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNIL 532

Query: 141 AGM--ILDLEENVKAVNI 94
           A    I     +VK +N+
Sbjct: 533 ANQWRIWAPLHSVKIINV 550


>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
          Length = 737

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
 Frame = -3

Query: 321 YAASHRWGDVVKVRRKMKDIGIKKVPGCSAIEVNGIVHEFIVGDTSHSKAIEIYSLLN-- 148
           YA + RW DV ++R K+ D G+KKVPGC++IEV+ +VHEF+VGD  H  + +IY +LN  
Sbjct: 578 YAGASRWDDVARIRTKLHDKGMKKVPGCTSIEVDNVVHEFLVGDKVHPLSEDIYKMLNEI 637

Query: 147 ----DMAGMILDLEE 115
               D++G + D  E
Sbjct: 638 DRLLDISGFVPDTSE 652