BLASTX nr result
ID: Cocculus22_contig00000094
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00000094
(493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261... 75 1e-11
emb|CBI23720.3| unnamed protein product [Vitis vinifera] 75 1e-11
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 74 3e-11
ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]... 73 4e-11
ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 73 5e-11
ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citr... 73 5e-11
emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera] 73 5e-11
gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlise... 72 6e-11
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 72 6e-11
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 70 2e-10
ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [A... 70 2e-10
ref|XP_007227321.1| hypothetical protein PRUPE_ppa016376mg, part... 70 2e-10
ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 70 2e-10
ref|XP_006649164.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 70 3e-10
ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 70 3e-10
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 70 3e-10
ref|XP_004954347.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 70 4e-10
ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group] g... 70 4e-10
gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays] 70 4e-10
ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [S... 70 4e-10
>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPY+CDSAQLAGIIQ+YGSPELVEVLY
Sbjct: 108 PVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY 144
>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPY+CDSAQLAGIIQ+YGSPELVEVLY
Sbjct: 108 PVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY 144
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPYN DSAQLAGIIQDYG+PELVEVLY
Sbjct: 110 PINTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLY 146
>ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]
gi|508714294|gb|EOY06191.1| RNA-binding family protein
[Theobroma cacao]
Length = 293
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPYN DSAQLAGIIQ+YGSPELVEVLY
Sbjct: 118 PVNTKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLY 154
>ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 309
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
NTKLYFGNLPYN DSAQLAGIIQDYGSPELVEVLY
Sbjct: 136 NTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLY 170
>ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citrus clementina]
gi|557522218|gb|ESR33585.1| hypothetical protein
CICLE_v10005487mg [Citrus clementina]
Length = 309
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
NTKLYFGNLPYN DSAQLAGIIQDYGSPELVEVLY
Sbjct: 136 NTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLY 170
>emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPY+CDSA LAGIIQ+YGSPELVEVLY
Sbjct: 63 PVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLY 99
>gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlisea aurea]
Length = 184
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 110 SNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
++TKLYFGNLPYNCDSAQLAGIIQDY SPEL+EVLY
Sbjct: 10 ASTKLYFGNLPYNCDSAQLAGIIQDYASPELIEVLY 45
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPYN DSAQLAGIIQ+YGSPE+VEVLY
Sbjct: 104 PVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLY 140
>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Solanum tuberosum]
Length = 278
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
NTKLYFGNLPY CDSAQLAGI+QDY SPELVEVLY
Sbjct: 105 NTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLY 139
>ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [Amborella trichopoda]
gi|548841480|gb|ERN01543.1| hypothetical protein
AMTR_s00002p00271280 [Amborella trichopoda]
Length = 288
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
+TKLYFGNLPY CDSAQLAGI+Q+YGSPELVEVLY
Sbjct: 115 STKLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLY 149
>ref|XP_007227321.1| hypothetical protein PRUPE_ppa016376mg, partial [Prunus persica]
gi|462424257|gb|EMJ28520.1| hypothetical protein
PRUPE_ppa016376mg, partial [Prunus persica]
Length = 296
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
NTKLYFGNLPY+ DSAQLAGIIQDYGSPEL+EVLY
Sbjct: 140 NTKLYFGNLPYSVDSAQLAGIIQDYGSPELIEVLY 174
>ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 281
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 107 NTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
NTKLYFGNLPY CDSAQLAGI+QDY SPELVEVLY
Sbjct: 108 NTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLY 142
>ref|XP_006649164.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Oryza
brachyantha]
Length = 238
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -3
Query: 110 SNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
+ TKLYFGNLPYNCDSAQLAGI+QDY +PE+VEVLY
Sbjct: 65 TTTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLY 100
>ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPY+ DSAQLAGIIQDY SPEL+EVLY
Sbjct: 122 PVNTKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLY 158
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3
Query: 113 PSNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
P NTKLYFGNLPYN DSAQLAG+IQ+YG+PE+VEVLY
Sbjct: 104 PVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLY 140
>ref|XP_004954347.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Setaria
italica]
Length = 305
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -3
Query: 110 SNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
+ TKLYFGNLPYNCDSAQLAGI+Q+Y SPE+VEVLY
Sbjct: 132 TTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY 167
>ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa
Japonica Group] gi|125584133|gb|EAZ25064.1| hypothetical
protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 316
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = -3
Query: 104 TKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
TKLYFGNLPYNCDSAQLAGI+QDY +PE+VEVLY
Sbjct: 145 TKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLY 178
>gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -3
Query: 110 SNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
+ TKLYFGNLPYNCDSAQLAGI+Q+Y SPE+VEVLY
Sbjct: 114 TTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY 149
>ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein
SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -3
Query: 110 SNTKLYFGNLPYNCDSAQLAGIIQDYGSPELVEVLY 3
+ TKLYFGNLPYNCDSAQLAGI+Q+Y SPE+VEVLY
Sbjct: 122 TTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLY 157