BLASTX nr result

ID: Cnidium21_contig00048684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048684
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517204.1| ATP binding protein, putative [Ricinus commu...   198   3e-49
ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica...   196   2e-48
ref|XP_002315787.1| chromatin remodeling complex subunit [Populu...   195   3e-48
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...   195   3e-48
ref|XP_003555334.1| PREDICTED: transcription regulatory protein ...   193   1e-47

>ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis]
           gi|223543839|gb|EEF45367.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1079

 Score =  198 bits (504), Expect = 3e-49
 Identities = 98/103 (95%), Positives = 101/103 (98%)
 Frame = +1

Query: 1   LGVYLELHGFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 180
           L +YL+LH FK+LRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV
Sbjct: 665 LEIYLQLHDFKYLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 724

Query: 181 IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 309
           IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI
Sbjct: 725 IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 767


>ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
            gi|355512013|gb|AES93636.1| Chromatin remodeling complex
            subunit [Medicago truncatula]
          Length = 1063

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/103 (94%), Positives = 101/103 (98%)
 Frame = +1

Query: 1    LGVYLELHGFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 180
            L VYL+LH +KFLRLDGSTKTEERG+LLK+FNAPDSPYFMFLLSTRAGGLGLNLQTADTV
Sbjct: 704  LEVYLQLHDYKFLRLDGSTKTEERGSLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 763

Query: 181  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 309
            IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI
Sbjct: 764  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 806


>ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222864827|gb|EEF01958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1132

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +1

Query: 1    LGVYLELHGFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 180
            L +YL+LH +K+LRLDGSTKTEERGTLLK+FNAPDSPYFMFLLSTRAGGLGLNLQTADTV
Sbjct: 760  LEIYLQLHDYKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 819

Query: 181  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 309
            IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS+EEVI
Sbjct: 820  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVI 862


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851428|gb|EEE88975.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1131

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +1

Query: 1    LGVYLELHGFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 180
            L +YL+LH +K+LRLDGSTKTEERGTLLK+FNAPDSPYFMFLLSTRAGGLGLNLQTADTV
Sbjct: 759  LEIYLQLHDYKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 818

Query: 181  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 309
            IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS+EEVI
Sbjct: 819  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVI 861


>ref|XP_003555334.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1073

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/103 (93%), Positives = 99/103 (96%)
 Frame = +1

Query: 1    LGVYLELHGFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 180
            L VYL LH FK+LRLDGSTKTEERG LL++FNAPDSPYFMFLLSTRAGGLGLNLQTADTV
Sbjct: 714  LEVYLRLHDFKYLRLDGSTKTEERGNLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 773

Query: 181  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 309
            IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI
Sbjct: 774  IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 816


Top