BLASTX nr result

ID: Cnidium21_contig00048659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048659
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor...   181   7e-44
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor...   181   7e-44
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor...   181   7e-44
emb|CBI36976.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor...   181   7e-44

>ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Glycine max]
          Length = 713

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/91 (94%), Positives = 91/91 (100%)
 Frame = +2

Query: 2   RTQPGKCFRLYTERSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFNFMDPPAPE 181
           RTQPGKCFRLYTE+SF+NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF+FMDPPAPE
Sbjct: 390 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 449

Query: 182 TLMRAIEVLNYLGALDDDGNLTRLGEIMSEF 274
           TLMRA+EVLNYLGALDDDGNLT+LGEIMSEF
Sbjct: 450 TLMRALEVLNYLGALDDDGNLTKLGEIMSEF 480


>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 1 [Glycine max]
          Length = 721

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/91 (94%), Positives = 91/91 (100%)
 Frame = +2

Query: 2   RTQPGKCFRLYTERSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFNFMDPPAPE 181
           RTQPGKCFRLYTE+SF+NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF+FMDPPAPE
Sbjct: 398 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 457

Query: 182 TLMRAIEVLNYLGALDDDGNLTRLGEIMSEF 274
           TLMRA+EVLNYLGALDDDGNLT+LGEIMSEF
Sbjct: 458 TLMRALEVLNYLGALDDDGNLTKLGEIMSEF 488


>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 720

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/91 (94%), Positives = 91/91 (100%)
 Frame = +2

Query: 2   RTQPGKCFRLYTERSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFNFMDPPAPE 181
           RTQPGKCFRLYTE+SF+NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF+FMDPPAPE
Sbjct: 397 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 456

Query: 182 TLMRAIEVLNYLGALDDDGNLTRLGEIMSEF 274
           TLMRA+EVLNYLGALDDDGNLT+LGEIMSEF
Sbjct: 457 TLMRALEVLNYLGALDDDGNLTKLGEIMSEF 487


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/91 (94%), Positives = 91/91 (100%)
 Frame = +2

Query: 2   RTQPGKCFRLYTERSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFNFMDPPAPE 181
           RTQPGKCFRLYTE+SF+NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF+FMDPPAPE
Sbjct: 364 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 423

Query: 182 TLMRAIEVLNYLGALDDDGNLTRLGEIMSEF 274
           TLMRA+EVLNYLGALDDDGNLT+LGEIMSEF
Sbjct: 424 TLMRALEVLNYLGALDDDGNLTKLGEIMSEF 454


>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
           hypothetical protein VITISV_036050 [Vitis vinifera]
          Length = 728

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/91 (94%), Positives = 91/91 (100%)
 Frame = +2

Query: 2   RTQPGKCFRLYTERSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFNFMDPPAPE 181
           RTQPGKCFRLYTE+SF+NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF+FMDPPAPE
Sbjct: 405 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 464

Query: 182 TLMRAIEVLNYLGALDDDGNLTRLGEIMSEF 274
           TLMRA+EVLNYLGALDDDGNLT+LGEIMSEF
Sbjct: 465 TLMRALEVLNYLGALDDDGNLTKLGEIMSEF 495


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