BLASTX nr result

ID: Cnidium21_contig00048654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048654
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      166   2e-39
ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   165   4e-39
emb|CBI39572.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like...   165   4e-39

>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   VSSSSNKSASFRTSNNDG-TLSYEELQSLDDIELANVVIFGNRVFRPLQHQACSASLANR 179
           VSS  NK    R S +D  +L+YEELQ+LDD ELANVVIFGN+ FRPLQHQAC A++A +
Sbjct: 143 VSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKATVAKQ 202

Query: 180 DCFVLMPTGGGKSLCYQLPATMRPGVTIVISPLLSLIQDQIITLNLKF 323
           DCFVLMPTGGGKSLCYQLPAT++PGVT+VISPLLSLIQDQIITLNLKF
Sbjct: 203 DCFVLMPTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKF 250


>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   VSSSSNKSASFRTSNNDG-TLSYEELQSLDDIELANVVIFGNRVFRPLQHQACSASLANR 179
           VSS  NK    R S +D  +L+YEELQ+LDD ELANVVIFGN+ FRPLQHQAC A++A +
Sbjct: 172 VSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKATVAKQ 231

Query: 180 DCFVLMPTGGGKSLCYQLPATMRPGVTIVISPLLSLIQDQIITLNLKF 323
           DCFVLMPTGGGKSLCYQLPAT++PGVT+VISPLLSLIQDQIITLNLKF
Sbjct: 232 DCFVLMPTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKF 279


>ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           1-like [Glycine max]
          Length = 612

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/106 (74%), Positives = 93/106 (87%)
 Frame = +3

Query: 6   SSSSNKSASFRTSNNDGTLSYEELQSLDDIELANVVIFGNRVFRPLQHQACSASLANRDC 185
           S+SS   +SF + +   + +YEELQ+LDDIELANVVIFGNR FRPLQHQAC A+LA +D 
Sbjct: 169 STSSKMQSSFASRDTSSSPTYEELQALDDIELANVVIFGNRTFRPLQHQACKAALAKQDS 228

Query: 186 FVLMPTGGGKSLCYQLPATMRPGVTIVISPLLSLIQDQIITLNLKF 323
           F+LMPTGGGKSLCYQLPAT++PGVT+V+SPLLSLIQDQIITLNLKF
Sbjct: 229 FILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKF 274


>emb|CBI39572.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/108 (76%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   VSSSSNKSASFRTSNND-GTLSYEELQSLDDIELANVVIFGNRVFRPLQHQACSASLANR 179
           VSS SNK A  + S ++ GTLSYE L  LDD ELANVVIFGNR FRPLQHQAC AS+  R
Sbjct: 129 VSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTKR 188

Query: 180 DCFVLMPTGGGKSLCYQLPATMRPGVTIVISPLLSLIQDQIITLNLKF 323
           DCFVLMPTGGGKSLCYQLPAT++PGVT+V+ PLLSLIQDQIITLNL F
Sbjct: 189 DCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNF 236


>ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
           vinifera]
          Length = 602

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/108 (76%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   VSSSSNKSASFRTSNND-GTLSYEELQSLDDIELANVVIFGNRVFRPLQHQACSASLANR 179
           VSS SNK A  + S ++ GTLSYE L  LDD ELANVVIFGNR FRPLQHQAC AS+  R
Sbjct: 159 VSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTKR 218

Query: 180 DCFVLMPTGGGKSLCYQLPATMRPGVTIVISPLLSLIQDQIITLNLKF 323
           DCFVLMPTGGGKSLCYQLPAT++PGVT+V+ PLLSLIQDQIITLNL F
Sbjct: 219 DCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNF 266


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