BLASTX nr result

ID: Cnidium21_contig00048649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048649
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    67   1e-09
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   2e-08

>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/119 (31%), Positives = 62/119 (52%)
 Frame = +2

Query: 2   AALFENPNRYSHAFIIRDHNGTLIEARSRCCQGSVTPVLAEAMGVREALSWVKTKNQHRV 181
           A +F NP+      +++DH G  + A +    G+  P +AE + ++EALSW + +    V
Sbjct: 42  ATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNV 101

Query: 182 NVETDSLELVQWIRSSYTSLSYLGRVVGECRQLLAGVQSQNVMLRFVKRSANRVARDIA 358
             E D L +V+ +    T  S LG ++ +C+ L + +   N    FVKRS N VA  +A
Sbjct: 102 VFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSI--SNCSFAFVKRSRNEVAHKLA 158


>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = +2

Query: 2   AALFENPNRYSHAFIIRDHNGTLIEARSRCCQGSVTPVLAEAMGVREALSWVKTKNQHRV 181
           A +F+  NR  +  ++R+H   L+ AR+    G     LAEAM VREALSW+K  N  RV
Sbjct: 67  AGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVREALSWIKHMNWSRV 126

Query: 182 NVETDSLELVQWIRSSYTSLSYLGRVVGECRQLLAGVQSQNVMLRFVKRSANRVARDIA 358
           +++ DSL +   + S   S    G ++  C+ ++A +   +     ++RS N  A  +A
Sbjct: 127 SIDMDSLGVCVALTSDNLS---FGLIIDGCKHVVANI--HDAAFTCIRRSTNHCAHMLA 180


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/119 (31%), Positives = 59/119 (49%)
 Frame = +2

Query: 2   AALFENPNRYSHAFIIRDHNGTLIEARSRCCQGSVTPVLAEAMGVREALSWVKTKNQHRV 181
           AA+F   NR+     +RD  G  ++A +   +G   P  AEA+G+R+A+ W+       V
Sbjct: 71  AAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNV 130

Query: 182 NVETDSLELVQWIRSSYTSLSYLGRVVGECRQLLAGVQSQNVMLRFVKRSANRVARDIA 358
            +E D   +V  I     + +  G ++ +CR LL   Q  N  + FV+R AN VA   A
Sbjct: 131 QLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQ--QFTNFKISFVRRQANVVAHSFA 187


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/117 (34%), Positives = 62/117 (52%)
 Frame = +2

Query: 8   LFENPNRYSHAFIIRDHNGTLIEARSRCCQGSVTPVLAEAMGVREALSWVKTKNQHRVNV 187
           +F   NR    FI ++ +GT   A +    G + P +AEA+ +RE L WVK  + + V  
Sbjct: 145 VFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWVKGLDLNYVVS 204

Query: 188 ETDSLELVQWIRSSYTSLSYLGRVVGECRQLLAGVQSQNVMLRFVKRSANRVARDIA 358
           E+D L LV  +     + S  G ++G+CR  L  +   +++  FVKR  NRVA  +A
Sbjct: 205 ESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIV--FVKRFGNRVAHLLA 259


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/119 (30%), Positives = 60/119 (50%)
 Frame = +2

Query: 2    AALFENPNRYSHAFIIRDHNGTLIEARSRCCQGSVTPVLAEAMGVREALSWVKTKNQHRV 181
            AA F+  NR      IRD +G L++AR+      +     EA+G+  A+ W K +N + +
Sbjct: 1578 AAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNI 1637

Query: 182  NVETDSLELVQWIRSSYTSLSYLGRVVGECRQLLAGVQSQNVMLRFVKRSANRVARDIA 358
              E DS  +V    ++   +S LG ++ ECR   +   + N  + F++R AN V   +A
Sbjct: 1638 TFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFT-NSRVEFIRRQANEVVHSLA 1695


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