BLASTX nr result

ID: Cnidium21_contig00048648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048648
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37171.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   137   1e-30
ref|XP_002865387.1| hypothetical protein ARALYDRAFT_494593 [Arab...   134   6e-30
ref|NP_199216.2| cellulose synthase A catalytic subunit 4 [UDP-f...   134   8e-30
gb|AAO15532.1|AF458083_1 cellulose synthase [Arabidopsis thaliana]    134   1e-29

>emb|CBI37171.3| unnamed protein product [Vitis vinifera]
          Length = 1000

 Score =  137 bits (344), Expect = 1e-30
 Identities = 73/124 (58%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
 Frame = -3

Query: 359 CCPQCKTRYKRHKGCPRVAGXXXXXXXXXXXXXXFQIKNYGDNAPDHQHLSTPSENGDHN 180
           CCPQC TRYKRHKGC RVAG              FQIKN      D Q++  PSENGD+N
Sbjct: 74  CCPQCNTRYKRHKGCARVAGDDEGSLDGDDFNDEFQIKN----TRDQQNVFAPSENGDYN 129

Query: 179 QQQKQHPNGPAFSSIAGSVVGKDFEAEKETYTNSEWKERVDKWKTRQEKRGLVSK----- 15
            QQ  H NG AFS+ AGSV GKDFE EK+ Y N EWK+RV+KWKTRQEK+GL+SK     
Sbjct: 130 PQQ-WHANGQAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQEKKGLISKDGGND 187

Query: 14  -GDD 6
            GDD
Sbjct: 188 PGDD 191


>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  137 bits (344), Expect = 1e-30
 Identities = 73/124 (58%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
 Frame = -3

Query: 359 CCPQCKTRYKRHKGCPRVAGXXXXXXXXXXXXXXFQIKNYGDNAPDHQHLSTPSENGDHN 180
           CCPQC TRYKRHKGC RVAG              FQIKN      D Q++  PSENGD+N
Sbjct: 79  CCPQCNTRYKRHKGCARVAGDDEGSLDGDDFNDEFQIKN----TRDQQNVFAPSENGDYN 134

Query: 179 QQQKQHPNGPAFSSIAGSVVGKDFEAEKETYTNSEWKERVDKWKTRQEKRGLVSK----- 15
            QQ  H NG AFS+ AGSV GKDFE EK+ Y N EWK+RV+KWKTRQEK+GL+SK     
Sbjct: 135 PQQ-WHANGQAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQEKKGLISKDGGND 192

Query: 14  -GDD 6
            GDD
Sbjct: 193 PGDD 196


>ref|XP_002865387.1| hypothetical protein ARALYDRAFT_494593 [Arabidopsis lyrata subsp.
           lyrata] gi|297311222|gb|EFH41646.1| hypothetical protein
           ARALYDRAFT_494593 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/119 (55%), Positives = 82/119 (68%)
 Frame = -3

Query: 359 CCPQCKTRYKRHKGCPRVAGXXXXXXXXXXXXXXFQIKNYGDNAPDHQHLSTPSENGDHN 180
           CCPQC T YKRHKG P++ G                IKN  D +  HQ+ +  SENGD+N
Sbjct: 58  CCPQCNTIYKRHKGSPKIVGDEENNGPDDSDDEL-NIKNRQDASSIHQNFAYGSENGDYN 116

Query: 179 QQQKQHPNGPAFSSIAGSVVGKDFEAEKETYTNSEWKERVDKWKTRQEKRGLVSKGDDS 3
            +Q+  PNG AFSS  GSV+GKDFEAE++ YT++EWKERVDKWK RQEKRGLV+KG+ +
Sbjct: 117 SKQQWRPNGRAFSS-TGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQT 174


>ref|NP_199216.2| cellulose synthase A catalytic subunit 4 [UDP-forming] [Arabidopsis
           thaliana] gi|73917712|sp|Q84JA6.1|CESA4_ARATH RecName:
           Full=Cellulose synthase A catalytic subunit 4
           [UDP-forming]; Short=AtCesA4; AltName: Full=Protein
           IRREGULAR XYLEM 5; Short=AtIRX5
           gi|28973611|gb|AAO64130.1| putative cellulose synthase
           catalytic subunit [Arabidopsis thaliana]
           gi|29824271|gb|AAP04096.1| putative cellulose synthase
           catalytic subunit [Arabidopsis thaliana]
           gi|110737053|dbj|BAF00480.1| cellulose synthase
           catalytic subunit like protein [Arabidopsis thaliana]
           gi|332007667|gb|AED95050.1| cellulose synthase A
           catalytic subunit 4 [UDP-forming] [Arabidopsis thaliana]
          Length = 1049

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/119 (55%), Positives = 82/119 (68%)
 Frame = -3

Query: 359 CCPQCKTRYKRHKGCPRVAGXXXXXXXXXXXXXXFQIKNYGDNAPDHQHLSTPSENGDHN 180
           CCPQC T YKRHKG P++AG                IK   D +  HQ+ +  SENGD+N
Sbjct: 64  CCPQCNTLYKRHKGSPKIAGDEENNGPDDSDDEL-NIKYRQDGSSIHQNFAYGSENGDYN 122

Query: 179 QQQKQHPNGPAFSSIAGSVVGKDFEAEKETYTNSEWKERVDKWKTRQEKRGLVSKGDDS 3
            +Q+  PNG AFSS  GSV+GKDFEAE++ YT++EWKERVDKWK RQEKRGLV+KG+ +
Sbjct: 123 SKQQWRPNGRAFSS-TGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQT 180


>gb|AAO15532.1|AF458083_1 cellulose synthase [Arabidopsis thaliana]
          Length = 1055

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 82/119 (68%)
 Frame = -3

Query: 359 CCPQCKTRYKRHKGCPRVAGXXXXXXXXXXXXXXFQIKNYGDNAPDHQHLSTPSENGDHN 180
           CCPQC T YKRHKG P++AG                IK   D +  HQ+ +  SENGD+N
Sbjct: 64  CCPQCNTLYKRHKGSPKIAGDEENNGPDDSDDEL-NIKYRQDGSSIHQNFAYGSENGDYN 122

Query: 179 QQQKQHPNGPAFSSIAGSVVGKDFEAEKETYTNSEWKERVDKWKTRQEKRGLVSKGDDS 3
            +Q+  PNG AFSS  GSV+GKDFEAE++ YT++EWKERVDKWK RQEKRGLV+KG+ +
Sbjct: 123 SKQQCRPNGRAFSS-TGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQT 180


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