BLASTX nr result

ID: Cnidium21_contig00048635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048635
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283760.2| PREDICTED: BEACH domain-containing protein l...   140   8e-32
emb|CBI19283.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002527372.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002886711.1| binding protein [Arabidopsis lyrata subsp. l...   113   1e-23
ref|NP_564728.3| WD40 and Beach domain-containing protein [Arabi...   112   2e-23

>ref|XP_002283760.2| PREDICTED: BEACH domain-containing protein lvsC-like, partial
           [Vitis vinifera]
          Length = 2754

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = +1

Query: 22  SLNQKRQFVSLNVNLVRKKWHFLCLTHSIGRAFSGGSQVRCYVDGVFVSSEKCSYAKVND 201
           S+NQKRQ VSL+VNLVRKKWHFLCLTHSIGRAFSGGSQ+RCYVDG   SSEKC Y K+++
Sbjct: 641 SINQKRQCVSLHVNLVRKKWHFLCLTHSIGRAFSGGSQLRCYVDGNLASSEKCRYPKISE 700

Query: 202 TQMSCTIGTKIDTPLTEDENYVPSIKEPSPF 294
              SCTIGTKI+ P  E+EN V SIKE SPF
Sbjct: 701 LLTSCTIGTKINLPPYEEENAVYSIKESSPF 731


>emb|CBI19283.3| unnamed protein product [Vitis vinifera]
          Length = 3077

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = +1

Query: 22   SLNQKRQFVSLNVNLVRKKWHFLCLTHSIGRAFSGGSQVRCYVDGVFVSSEKCSYAKVND 201
            S+NQKRQ VSL+VNLVRKKWHFLCLTHSIGRAFSGGSQ+RCYVDG   SSEKC Y K+++
Sbjct: 1167 SINQKRQCVSLHVNLVRKKWHFLCLTHSIGRAFSGGSQLRCYVDGNLASSEKCRYPKISE 1226

Query: 202  TQMSCTIGTKIDTPLTEDENYVPSIKEPSPF 294
               SCTIGTKI+ P  E+EN V SIKE SPF
Sbjct: 1227 LLTSCTIGTKINLPPYEEENAVYSIKESSPF 1257


>ref|XP_002527372.1| conserved hypothetical protein [Ricinus communis]
            gi|223533291|gb|EEF35044.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3206

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = +1

Query: 22   SLNQKRQFVSLNVNLVRKKWHFLCLTHSIGRAFSGGSQVRCYVDGVFVSSEKCSYAKVND 201
            S+N KRQ V L++NLVRKKWHFLC+THSIGRAFSGGS +RCY+D   VSSE+C YAKVN+
Sbjct: 1096 SINLKRQSVQLHINLVRKKWHFLCITHSIGRAFSGGSLLRCYIDSSLVSSERCRYAKVNE 1155

Query: 202  TQMSCTIGTKIDTPLTEDENYVPSIKE 282
               +C IG+KI  P  E++  + S+++
Sbjct: 1156 LLTNCRIGSKITLPQNEEDGSLDSVQD 1182


>ref|XP_002886711.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332552|gb|EFH62970.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1323

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/92 (57%), Positives = 68/92 (73%)
 Frame = +1

Query: 19  MSLNQKRQFVSLNVNLVRKKWHFLCLTHSIGRAFSGGSQVRCYVDGVFVSSEKCSYAKVN 198
           +SLN KRQ V+++ N V KKWHF+C++HSIGRAF GGS +RCYVDG  VSSE+CSY KV 
Sbjct: 515 VSLNLKRQCVNVHANFVCKKWHFICISHSIGRAFWGGSLLRCYVDGDLVSSERCSYPKVT 574

Query: 199 DTQMSCTIGTKIDTPLTEDENYVPSIKEPSPF 294
           D   SC IGT+I  P  +D + + SI++  PF
Sbjct: 575 DVLTSCLIGTRITLPHIQDNDGLESIRDVFPF 606


>ref|NP_564728.3| WD40 and Beach domain-containing protein [Arabidopsis thaliana]
           gi|332195397|gb|AEE33518.1| WD40 and Beach
           domain-containing protein [Arabidopsis thaliana]
          Length = 2604

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/92 (57%), Positives = 69/92 (75%)
 Frame = +1

Query: 19  MSLNQKRQFVSLNVNLVRKKWHFLCLTHSIGRAFSGGSQVRCYVDGVFVSSEKCSYAKVN 198
           +SLN KRQ V+++ NLV KKWHF+C++HSIGRAF GGS +RCYV+G  VSSE+CSY KV 
Sbjct: 515 VSLNLKRQCVNVHTNLVCKKWHFICVSHSIGRAFWGGSLLRCYVNGDLVSSERCSYPKVT 574

Query: 199 DTQMSCTIGTKIDTPLTEDENYVPSIKEPSPF 294
           D   SC IGT+I  P  +D + + SI++  PF
Sbjct: 575 DVLTSCLIGTRITLPHIQDNDGLESIRDVFPF 606


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