BLASTX nr result

ID: Cnidium21_contig00048611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048611
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    61   1e-07
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   4e-07
ref|XP_003592279.1| hypothetical protein MTR_1g101060 [Medicago ...    59   5e-07
ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    58   7e-07
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    57   1e-06

>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/86 (36%), Positives = 46/86 (53%)
 Frame = -1

Query: 273 WLLSLSHQEVCIESDSLLCVQAIKHSQENHLEVGHILEDCRTALLARSGFSVQFVKRQAN 94
           W+LSL    V  E D+ + V A+     +  E G ++ DCR  L     +SVQF+++QAN
Sbjct: 232 WVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQAN 291

Query: 93  KAAHLMARLPCSLDCPNILTSPPDLL 16
             AH +AR     D  N+ + PPD +
Sbjct: 292 LVAHSLARASHLQDGFNMFSVPPDCI 317


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/84 (40%), Positives = 45/84 (53%)
 Frame = -1

Query: 252 QEVCIESDSLLCVQAIKHSQENHLEVGHILEDCRTALLARSGFSVQFVKRQANKAAHLMA 73
           Q V  +SD  + V A+  S   H E+G I+  C+  L   + FSV+FV+RQANK AH +A
Sbjct: 173 QSVIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQANKVAHNIA 232

Query: 72  RLPCSLDCPNILTSPPDLLLETLL 1
           R   S   P+I    P  L   LL
Sbjct: 233 RASLSHPSPHIFFDVPSSLNTLLL 256


>ref|XP_003592279.1| hypothetical protein MTR_1g101060 [Medicago truncatula]
           gi|355481327|gb|AES62530.1| hypothetical protein
           MTR_1g101060 [Medicago truncatula]
          Length = 132

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = -1

Query: 276 FWLLSLSHQEVC---IESDSLLCVQAIKHSQENHLEVGHILEDCRTALLARSGFSVQFVK 106
           F  ++ S  E C    ESD  + V A+ +S   H E+G I+  C+  L   + FSV+FV+
Sbjct: 34  FLRVTPSEAEACNLIFESDCKIVVDAVNYSVNPHNELGDIIFYCKQLLSLYTNFSVRFVR 93

Query: 105 RQANKAAHLMARLPCSLDCPNILTSPPDLLLETLL 1
           RQ NK AH +AR   S   P I +  P  L   LL
Sbjct: 94  RQTNKVAHNIARASLSHPSPRIFSDVPSSLNTLLL 128


>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -1

Query: 267 LSLSHQEVCIESDSLLCVQAIKHSQENHL-EVGHILEDCRTALLARSGFSVQFVKRQANK 91
           +SL  Q V  E+D +    AI H+   HL EVG I+  CR  L   + F V +++RQAN+
Sbjct: 19  ISLGFQTVRFETDCMTLADAI-HTTSAHLNEVGDIISQCRGLLFTNTDFKVSYIRRQANR 77

Query: 90  AAHLMARLPCSLDCPNILTSPPDLLL 13
            AH +AR   S   P++  S P  LL
Sbjct: 78  VAHSIARASLSHLSPHLFYSVPSTLL 103


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 45/90 (50%)
 Frame = -1

Query: 279 LFWLLSLSHQEVCIESDSLLCVQAIKHSQENHLEVGHILEDCRTALLARSGFSVQFVKRQ 100
           + WL  L    V +E D  L V +I     N  E G I++DCR+ L   + F + FV+RQ
Sbjct: 119 ILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQ 178

Query: 99  ANKAAHLMARLPCSLDCPNILTSPPDLLLE 10
           AN  AH  AR+        +  + P+ +LE
Sbjct: 179 ANVVAHSFARVSIFQPLFGLAFAKPESILE 208


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