BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048584
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,...    77   1e-12
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]    77   1e-12
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/91 (46%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
 Frame = -1

Query: 256 MALKFSSLRFSLKILRWVPLNMNYSSLSCASELKIIPETDEKQL--SSVEFD---RFLKN 92
           MA+K SSL  S +I +WVPL  + SS+SCA+ ++ +PE D+ +   +  EF+   +FL+N
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 91  KL-SDSLTKILDSTHDVNFSLKLFKWASLQK 2
           +L  D L ++LD+THD+N ++K+FKWAS QK
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQK 91


>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 739

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 SSLRFSLKILRWVPLNMNYSSLSCASELKIIPETDEKQLSSVEFD---RFLKNKL-SDSL 74
           S L  S +I RWV LN    S+SC S ++I PE D+  L++ +FD     L+NKL  DSL
Sbjct: 17  SPLTLSKRISRWVNLNSALFSVSCTSSIQINPEIDQSILNTTDFDAKIHILRNKLYPDSL 76

Query: 73  TKILDSTHDVNFSLKLFKWASLQK 2
            K+L ST D+N ++K+FKWASLQK
Sbjct: 77  IKVLQSTSDINSAVKIFKWASLQK 100


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
 Frame = -1

Query: 256 MALKFSSLRFSLKILRWVPLNMNYSSLSCASELKIIPETDEKQL--SSVEFD---RFLKN 92
           MA+K SSL  S +I +WVPL  + SS+S A+ ++ +PE D+ +   +  EF+   +FL+N
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 91  KL-SDSLTKILDSTHDVNFSLKLFKWASLQK 2
           +L  D L ++LD+THD+N ++K+FKWAS QK
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQK 91


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = -1

Query: 229 FSLKILRWVPLNMNYSSLSCASELKIIPETDEKQLSSVEFD---RFLKNKL-SDSLTKIL 62
           F  +I +WV L    SS+SC + ++I PE ++   +  +FD   + L+NKL  D+L K+L
Sbjct: 7   FLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDNLIKVL 66

Query: 61  DSTHDVNFSLKLFKWASLQK 2
            ST DVN ++K+FKWA+LQ+
Sbjct: 67  KSTSDVNSAVKIFKWAALQR 86


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
 Frame = -1

Query: 226 SLKILRWVPLNMNYSSLSCASELKIIPETDEKQLSSVEFD---RFLKNKLS-DSLTKILD 59
           S  I +W+ L    SS+SC + ++I PE ++   +  +FD   + L+NKL  D L K+L 
Sbjct: 8   SKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDYLIKVLK 67

Query: 58  STHDVNFSLKLFKWASLQK 2
           ST D+N ++KLFKWASLQ+
Sbjct: 68  STSDINSAVKLFKWASLQR 86