BLASTX nr result

ID: Cnidium21_contig00048570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048570
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   159   2e-37
gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidop...   150   8e-35

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/127 (62%), Positives = 104/127 (81%)
 Frame = +3

Query: 6   DLESVVDAENVVETMSVFRVRPDETSFGFLAYVYALKGLEKKIAEIKSLVSGFGFSDRRV 185
           +LESV +AE V+ETMSV  ++PDE SFGFLAY+YALKG + KI E+  L+SGFGFS++++
Sbjct: 226 ELESVSEAEKVIETMSVLGIKPDELSFGFLAYLYALKGFQDKIIELNGLMSGFGFSNKKL 285

Query: 186 FFCNLISGYVKCGNMESVSQAVLGFLREENGKDTNFAQETYCEVVQGFLKHGGMKDLASL 365
           FF  LI GYVK G+ E+VS+ +L  LRE+ G D NF++ETYC+VV+GF+K GG+K LA+L
Sbjct: 286 FFSYLIRGYVKSGSFEAVSETILRSLREQGGLDLNFSEETYCQVVKGFMKDGGIKGLANL 345

Query: 366 IIEAQKL 386
           IIEAQKL
Sbjct: 346 IIEAQKL 352


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/128 (60%), Positives = 104/128 (81%)
 Frame = +3

Query: 3   RDLESVVDAENVVETMSVFRVRPDETSFGFLAYVYALKGLEKKIAEIKSLVSGFGFSDRR 182
           +DLESV +AE VVE MSV  ++PDE+SFGFLAY+YALKGLE+KI E++ L+ GFGFS ++
Sbjct: 225 QDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKK 284

Query: 183 VFFCNLISGYVKCGNMESVSQAVLGFLREENGKDTNFAQETYCEVVQGFLKHGGMKDLAS 362
           V +  LI+ YVK GN+E VS+ +   LRE++ +  NF++ETYCEVV+GFL++G +KDLAS
Sbjct: 285 VIYSYLINAYVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSIKDLAS 344

Query: 363 LIIEAQKL 386
           LIIE QKL
Sbjct: 345 LIIETQKL 352


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/128 (60%), Positives = 104/128 (81%)
 Frame = +3

Query: 3   RDLESVVDAENVVETMSVFRVRPDETSFGFLAYVYALKGLEKKIAEIKSLVSGFGFSDRR 182
           +DLESV +AE VVE MSV  ++PDE+SFGFLAY+YALKGLE+KI E++ L+ GFGFS ++
Sbjct: 225 QDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKK 284

Query: 183 VFFCNLISGYVKCGNMESVSQAVLGFLREENGKDTNFAQETYCEVVQGFLKHGGMKDLAS 362
           V +  LI+ YVK GN+E VS+ +   LRE++ +  NF++ETYCEVV+GFL++G +KDLAS
Sbjct: 285 VIYSYLINAYVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSIKDLAS 344

Query: 363 LIIEAQKL 386
           LIIE QKL
Sbjct: 345 LIIETQKL 352


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/127 (60%), Positives = 102/127 (80%)
 Frame = +3

Query: 6   DLESVVDAENVVETMSVFRVRPDETSFGFLAYVYALKGLEKKIAEIKSLVSGFGFSDRRV 185
           ++ESV DA+NV+E MSV  ++PDE SFGFLAY+YALKGL+ +I E+KSL+ GF   ++R+
Sbjct: 221 EIESVSDADNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQDRIVELKSLMEGFSVLNKRL 280

Query: 186 FFCNLISGYVKCGNMESVSQAVLGFLREENGKDTNFAQETYCEVVQGFLKHGGMKDLASL 365
           F+ NLI GYVK GN+ESVS  ++  LREE+ K+ N  +ETYCEVV+GFLK G +K LA+L
Sbjct: 281 FYSNLIRGYVKSGNLESVSATIICSLREEDEKNYNINEETYCEVVKGFLKDGSLKGLANL 340

Query: 366 IIEAQKL 386
           IIEA+KL
Sbjct: 341 IIEARKL 347


>gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
          Length = 860

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/128 (54%), Positives = 104/128 (81%)
 Frame = +3

Query: 3   RDLESVVDAENVVETMSVFRVRPDETSFGFLAYVYALKGLEKKIAEIKSLVSGFGFSDRR 182
           R +ES+ DAENV+E+M+V  V+PDE SFGFLAY+YA KGL +KI+E+++L+ GFGF+ RR
Sbjct: 429 RQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRR 488

Query: 183 VFFCNLISGYVKCGNMESVSQAVLGFLREENGKDTNFAQETYCEVVQGFLKHGGMKDLAS 362
           + + N+ISGYVK G+++SVS  +L  L+ E G++++F+ ETYCE+V+GF++   +K LA 
Sbjct: 489 ILYSNMISGYVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAK 547

Query: 363 LIIEAQKL 386
           +I+EAQKL
Sbjct: 548 VILEAQKL 555


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