BLASTX nr result
ID: Cnidium21_contig00048525
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00048525 (380 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 182 2e-44 ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat... 177 6e-43 ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat... 177 8e-43 ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ... 163 1e-38 ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group] g... 140 8e-32 >ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Vitis vinifera] Length = 1008 Score = 182 bits (463), Expect = 2e-44 Identities = 85/126 (67%), Positives = 104/126 (82%) Frame = -3 Query: 378 NIEMAKWVSTKLFELEPPTAGSYILLSNTCASGDKWDDVAQVRGLMKDMGVKKHPGQSWI 199 NIEM WV KL ELEP AG YIL S+ CA+ +W++ A++R LM+ GVKK+P QSWI Sbjct: 820 NIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWI 879 Query: 198 QLKNEVHSFVMGDRSHPEEVAIYSYLDELIGRLKEIGYSTEANIVMQDVEEEQKELLIGF 19 QLKN+VHSFVMGDRSHP++ IYSYLDELIGRLKEIGYST+ VMQDVE+EQ+++L+G+ Sbjct: 880 QLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGY 939 Query: 18 HSEKLA 1 HSEKLA Sbjct: 940 HSEKLA 945 >ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330-like [Glycine max] Length = 1011 Score = 177 bits (450), Expect = 6e-43 Identities = 83/126 (65%), Positives = 100/126 (79%) Frame = -3 Query: 378 NIEMAKWVSTKLFELEPPTAGSYILLSNTCASGDKWDDVAQVRGLMKDMGVKKHPGQSWI 199 N+EM KWVS L ++ P G+Y+LLSN CAS +WD+ A+VR LM GVKK PGQSWI Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWI 882 Query: 198 QLKNEVHSFVMGDRSHPEEVAIYSYLDELIGRLKEIGYSTEANIVMQDVEEEQKELLIGF 19 QLK+++H+FVMGDRSHP++ IYSYLD LIGRLKEIGYS + +VMQDVEEEQ E+LI Sbjct: 883 QLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISH 942 Query: 18 HSEKLA 1 HSEKLA Sbjct: 943 HSEKLA 948 >ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330-like [Glycine max] Length = 1011 Score = 177 bits (449), Expect = 8e-43 Identities = 81/126 (64%), Positives = 100/126 (79%) Frame = -3 Query: 378 NIEMAKWVSTKLFELEPPTAGSYILLSNTCASGDKWDDVAQVRGLMKDMGVKKHPGQSWI 199 N+EM KWVS L ++ P G+Y+LLSN CAS +WD+ A+VR LM G+KK PGQSWI Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWI 882 Query: 198 QLKNEVHSFVMGDRSHPEEVAIYSYLDELIGRLKEIGYSTEANIVMQDVEEEQKELLIGF 19 QLK+++H+F+MGDRSHP++ IYSYLD LIGRLKEIGYS + +VMQDVEEEQ E+LI Sbjct: 883 QLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISH 942 Query: 18 HSEKLA 1 HSEKLA Sbjct: 943 HSEKLA 948 >ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula] gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 755 Score = 163 bits (413), Expect = 1e-38 Identities = 79/126 (62%), Positives = 94/126 (74%) Frame = -3 Query: 378 NIEMAKWVSTKLFELEPPTAGSYILLSNTCASGDKWDDVAQVRGLMKDMGVKKHPGQSWI 199 N M K VS L + P +YILLSN C+S +WD+ A VR LM GVKK PGQSW+ Sbjct: 567 NFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626 Query: 198 QLKNEVHSFVMGDRSHPEEVAIYSYLDELIGRLKEIGYSTEANIVMQDVEEEQKELLIGF 19 QLK+++HSF +GDRSHP++ IYSYLD LIGRLKEIGYS +A +VMQDVEEEQ E+LI Sbjct: 627 QLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISH 686 Query: 18 HSEKLA 1 HSEKLA Sbjct: 687 HSEKLA 692 >ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group] gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group] Length = 720 Score = 140 bits (354), Expect = 8e-32 Identities = 66/124 (53%), Positives = 91/124 (73%) Frame = -3 Query: 372 EMAKWVSTKLFELEPPTAGSYILLSNTCASGDKWDDVAQVRGLMKDMGVKKHPGQSWIQL 193 E AK S KL +LE AGSY++LSN A+ +KW D ++R M++ V+K PG+SWI L Sbjct: 534 EYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHL 593 Query: 192 KNEVHSFVMGDRSHPEEVAIYSYLDELIGRLKEIGYSTEANIVMQDVEEEQKELLIGFHS 13 KN VH+FV GD SHP+ IY+YL++L+ RLKEIGY++ ++V+ DVE+EQ+E + FHS Sbjct: 594 KNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHS 653 Query: 12 EKLA 1 EKLA Sbjct: 654 EKLA 657