BLASTX nr result
ID: Cnidium21_contig00048516
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00048516 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit... 96 2e-18 emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] 96 2e-18 ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like... 72 4e-11 ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi... 72 5e-11 ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing... 72 6e-11 >ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera] Length = 543 Score = 96.3 bits (238), Expect = 2e-18 Identities = 45/62 (72%), Positives = 51/62 (82%) Frame = +2 Query: 62 SSRTASEIDIGRWGNGGSELSLDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241 + RT SE++IGRW NGGSEL DEE QS NSL+S+ N SF RRTLLWLMGRQNKVVHS+ Sbjct: 479 TGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSS 538 Query: 242 FP 247 FP Sbjct: 539 FP 540 >emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] Length = 543 Score = 96.3 bits (238), Expect = 2e-18 Identities = 45/62 (72%), Positives = 51/62 (82%) Frame = +2 Query: 62 SSRTASEIDIGRWGNGGSELSLDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241 + RT SE++IGRW NGGSEL DEE QS NSL+S+ N SF RRTLLWLMGRQNKVVHS+ Sbjct: 479 TGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSS 538 Query: 242 FP 247 FP Sbjct: 539 FP 540 >ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max] Length = 522 Score = 72.4 bits (176), Expect = 4e-11 Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 3/67 (4%) Frame = +2 Query: 50 CGGDSSRTASEIDIGRWGNGG-SELSLDEENQSYNSLES-ETNTQSFPRRTLLWLM-GRQ 220 C D+ T SE+DIG+W NGG SE D+ENQS SL+S + SF RRTLLWL GRQ Sbjct: 453 CKFDTRSTISEMDIGKWENGGGSEFDYDDENQSCYSLDSSQARAPSFARRTLLWLTGGRQ 512 Query: 221 NKVVHSA 241 NKVVHSA Sbjct: 513 NKVVHSA 519 >ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi|355511288|gb|AES92430.1| RING finger protein [Medicago truncatula] Length = 511 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%) Frame = +2 Query: 71 TASEIDIGRWGNGG-SELS-LDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241 T SE+D G+W NGG SE S DEENQS S++S+ SF RRTLLWL G+QNKVVHS+ Sbjct: 448 TVSEMDFGKWENGGGSEFSGYDEENQSCYSMDSQARAPSFARRTLLWLTGKQNKVVHSS 506 >ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like, partial [Glycine max] Length = 524 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 3/67 (4%) Frame = +2 Query: 50 CGGDSSRTASEIDIGRWGNG-GSELSLDEENQSYNSLES-ETNTQSFPRRTLLWLM-GRQ 220 C D+ T SE+DIG+W NG G+E DEENQS S++S + SF RRTLLWL GRQ Sbjct: 455 CKFDTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDSSQARAPSFARRTLLWLTGGRQ 514 Query: 221 NKVVHSA 241 NKVVHSA Sbjct: 515 NKVVHSA 521