BLASTX nr result

ID: Cnidium21_contig00048516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048516
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    96   2e-18
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    96   2e-18
ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...    72   4e-11
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...    72   5e-11
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    72   6e-11

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 62  SSRTASEIDIGRWGNGGSELSLDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241
           + RT SE++IGRW NGGSEL  DEE QS NSL+S+ N  SF RRTLLWLMGRQNKVVHS+
Sbjct: 479 TGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSS 538

Query: 242 FP 247
           FP
Sbjct: 539 FP 540


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 62  SSRTASEIDIGRWGNGGSELSLDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241
           + RT SE++IGRW NGGSEL  DEE QS NSL+S+ N  SF RRTLLWLMGRQNKVVHS+
Sbjct: 479 TGRTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSS 538

Query: 242 FP 247
           FP
Sbjct: 539 FP 540


>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  CGGDSSRTASEIDIGRWGNGG-SELSLDEENQSYNSLES-ETNTQSFPRRTLLWLM-GRQ 220
           C  D+  T SE+DIG+W NGG SE   D+ENQS  SL+S +    SF RRTLLWL  GRQ
Sbjct: 453 CKFDTRSTISEMDIGKWENGGGSEFDYDDENQSCYSLDSSQARAPSFARRTLLWLTGGRQ 512

Query: 221 NKVVHSA 241
           NKVVHSA
Sbjct: 513 NKVVHSA 519


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = +2

Query: 71  TASEIDIGRWGNGG-SELS-LDEENQSYNSLESETNTQSFPRRTLLWLMGRQNKVVHSA 241
           T SE+D G+W NGG SE S  DEENQS  S++S+    SF RRTLLWL G+QNKVVHS+
Sbjct: 448 TVSEMDFGKWENGGGSEFSGYDEENQSCYSMDSQARAPSFARRTLLWLTGKQNKVVHSS 506


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  CGGDSSRTASEIDIGRWGNG-GSELSLDEENQSYNSLES-ETNTQSFPRRTLLWLM-GRQ 220
           C  D+  T SE+DIG+W NG G+E   DEENQS  S++S +    SF RRTLLWL  GRQ
Sbjct: 455 CKFDTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDSSQARAPSFARRTLLWLTGGRQ 514

Query: 221 NKVVHSA 241
           NKVVHSA
Sbjct: 515 NKVVHSA 521


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