BLASTX nr result

ID: Cnidium21_contig00048500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048500
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              164   9e-39

>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  172 bits (436), Expect = 3e-41
 Identities = 74/115 (64%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 GSGACGFNSICRLGDSGRPTCGCPKSYSLIDPTNKYGSCKPNFFLSCEDEGPSSKEELYD 163
           GSG CGFNS+CRL   GRP C CP  YSL+DP+++YGSC+PN+  SCE++  +  E+LYD
Sbjct: 300 GSGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVEDLYD 359

Query: 162 FWELTDTDWPTSDYEQLKPVTQIDCKNYCLNDCLCAVAIYR-GDTCWKKKLPLSN 1
           F ELT+TDWPTSDY  L+P T+  C+  CLNDC+CAVAI+R GD CWKKKLPLSN
Sbjct: 360 FEELTNTDWPTSDYALLQPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLSN 414


>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  171 bits (432), Expect = 7e-41
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 GSGACGFNSICRLGDSGRPTCGCPKSYSLIDPTNKYGSCKPNFFLSCEDEGPSSKEELYD 163
           GSG CGFNS+CRL    RP C CP  YSL+DP+++YGSC+PN+  SCE++  +  E+LYD
Sbjct: 300 GSGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVEDLYD 359

Query: 162 FWELTDTDWPTSDYEQLKPVTQIDCKNYCLNDCLCAVAIYR-GDTCWKKKLPLSN 1
           F ELT+TDWPTSDY  LKP T+  C+  CLNDC+CAVAI+R GD CWKKKLPLSN
Sbjct: 360 FEELTNTDWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLSN 414


>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/116 (62%), Positives = 89/116 (76%)
 Frame = -2

Query: 348 DQGSGACGFNSICRLGDSGRPTCGCPKSYSLIDPTNKYGSCKPNFFLSCEDEGPSSKEEL 169
           D GSGACG+NSIC L    RP C CP+ +SL+D  +KYGSC P+F LSC D+G +S E+ 
Sbjct: 240 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 299

Query: 168 YDFWELTDTDWPTSDYEQLKPVTQIDCKNYCLNDCLCAVAIYRGDTCWKKKLPLSN 1
           YDF EL + DWPTSDYE+ KP+ + +C+  CLNDCLC+VAI+R D CWKKKLPLSN
Sbjct: 300 YDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFR-DGCWKKKLPLSN 354


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/116 (62%), Positives = 89/116 (76%)
 Frame = -2

Query: 348 DQGSGACGFNSICRLGDSGRPTCGCPKSYSLIDPTNKYGSCKPNFFLSCEDEGPSSKEEL 169
           D GSGACG+NSIC L    RP C CP+ +SL+D  +KYGSC P+F LSC D+G +S E+ 
Sbjct: 257 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 316

Query: 168 YDFWELTDTDWPTSDYEQLKPVTQIDCKNYCLNDCLCAVAIYRGDTCWKKKLPLSN 1
           YDF EL + DWPTSDYE+ KP+ + +C+  CLNDCLC+VAI+R D CWKKKLPLSN
Sbjct: 317 YDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFR-DGCWKKKLPLSN 371


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/116 (62%), Positives = 89/116 (76%)
 Frame = -2

Query: 348 DQGSGACGFNSICRLGDSGRPTCGCPKSYSLIDPTNKYGSCKPNFFLSCEDEGPSSKEEL 169
           D GSGACG+NSIC L    RP C CP+ +SL+D  +KYGSC P+F LSC D+G +S E+ 
Sbjct: 335 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 394

Query: 168 YDFWELTDTDWPTSDYEQLKPVTQIDCKNYCLNDCLCAVAIYRGDTCWKKKLPLSN 1
           YDF EL + DWPTSDYE+ KP+ + +C+  CLNDCLC+VAI+R D CWKKKLPLSN
Sbjct: 395 YDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFR-DGCWKKKLPLSN 449


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