BLASTX nr result
ID: Cnidium21_contig00048464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00048464 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2... 157 1e-36 ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi... 152 3e-35 ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32 gb|ACU21163.1| unknown [Glycine max] 144 1e-32 ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 140 1e-31 >ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1| predicted protein [Populus trichocarpa] Length = 442 Score = 157 bits (396), Expect = 1e-36 Identities = 71/105 (67%), Positives = 87/105 (82%) Frame = -1 Query: 317 WLFDQMSERDVYSWNSIISAYCKHPKALLYFESMRNTNIFPDRVTFVSLLSTCAHLGMVK 138 WLFD M ++D+ SWNSIISA+CK KAL YFE M PD++TFVSLLS CAHLG+VK Sbjct: 266 WLFDHMPKKDIVSWNSIISAHCKDLKALTYFELMERDGALPDKITFVSLLSACAHLGLVK 325 Query: 137 DGQMLFSMMRDEYRISPVMEHYACMVNLYGRAGLIDEAYDIITNQ 3 DG+ LFS+M+ +Y+I+P+MEHYACMVNLYGRAGLI+EAY II +Q Sbjct: 326 DGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQ 370 >ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Vitis vinifera] gi|296084180|emb|CBI24568.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 152 bits (384), Expect = 3e-35 Identities = 72/102 (70%), Positives = 84/102 (82%) Frame = -1 Query: 317 WLFDQMSERDVYSWNSIISAYCKHPKALLYFESMRNTNIFPDRVTFVSLLSTCAHLGMVK 138 WLFD M ERDV SWNSIISA+ K KA+ YF M+ ++ PD VTFVSLLS CAHLG+VK Sbjct: 336 WLFDHMPERDVVSWNSIISAHRKDLKAITYFSRMQKADVLPDVVTFVSLLSACAHLGLVK 395 Query: 137 DGQMLFSMMRDEYRISPVMEHYACMVNLYGRAGLIDEAYDII 12 DG+ LFSMMR++Y + P MEHYACMVNLYGRAGLI+EAY+II Sbjct: 396 DGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEII 437 >ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like [Glycine max] Length = 526 Score = 144 bits (362), Expect = 1e-32 Identities = 63/104 (60%), Positives = 83/104 (79%) Frame = -1 Query: 317 WLFDQMSERDVYSWNSIISAYCKHPKALLYFESMRNTNIFPDRVTFVSLLSTCAHLGMVK 138 W+F+ M ERDV SWNSIISA+CK +AL +FE M + PD++TFVS+LS CA+LG++K Sbjct: 347 WVFNLMPERDVVSWNSIISAHCKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLK 406 Query: 137 DGQMLFSMMRDEYRISPVMEHYACMVNLYGRAGLIDEAYDIITN 6 DG+ LF++M +Y+I P+MEHY CMVNLYGRAGLI +AY II + Sbjct: 407 DGERLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSIIVD 450 >gb|ACU21163.1| unknown [Glycine max] Length = 481 Score = 144 bits (362), Expect = 1e-32 Identities = 63/104 (60%), Positives = 83/104 (79%) Frame = -1 Query: 317 WLFDQMSERDVYSWNSIISAYCKHPKALLYFESMRNTNIFPDRVTFVSLLSTCAHLGMVK 138 W+F+ M ERDV SWNSIISA+CK +AL +FE M + PD++TFVS+LS CA+LG++K Sbjct: 347 WVFNLMPERDVVSWNSIISAHCKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLK 406 Query: 137 DGQMLFSMMRDEYRISPVMEHYACMVNLYGRAGLIDEAYDIITN 6 DG+ LF++M +Y+I P+MEHY CMVNLYGRAGLI +AY II + Sbjct: 407 DGERLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSIIVD 450 >ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like [Cucumis sativus] Length = 489 Score = 140 bits (353), Expect = 1e-31 Identities = 65/103 (63%), Positives = 81/103 (78%) Frame = -1 Query: 317 WLFDQMSERDVYSWNSIISAYCKHPKALLYFESMRNTNIFPDRVTFVSLLSTCAHLGMVK 138 WLF QM ++D+ SWNSIISA+ +AL YFE M + + PD VTFVSLLSTCAHLG+VK Sbjct: 311 WLFQQMPQKDMVSWNSIISAHFNSAEALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVK 370 Query: 137 DGQMLFSMMRDEYRISPVMEHYACMVNLYGRAGLIDEAYDIIT 9 +G L+ +M+ +Y I P +EHYACMVNLYGRAG+I+EAY IIT Sbjct: 371 EGXELYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKIIT 413