BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048462
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   214   8e-54
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...   208   4e-52
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali...   206   2e-51
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab...   202   2e-50

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score =  214 bits (544), Expect = 8e-54
 Identities = 102/124 (82%), Positives = 112/124 (90%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N+YTFTICIR+LGRAGKIDEAY ILKRMD  GCGPDVVTYTVLIDALC A KL+ AKE+F
Sbjct: 261 NIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF 320

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            KMKAS HKPD+VTYITLLDKFSD GDLDA+++FWSEMEADGY  DVVTFT+LI ALCKV
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380

Query: 362 GKID 373
           GK+D
Sbjct: 381 GKVD 384



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/121 (35%), Positives = 67/121 (55%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+ I +R  G+AG++D+A ++L  M+  GC P+VV    LID L  A ++D A ++F++M
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM 568

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
           K     P  VTY TLL      G +      +  M AD    + ++F  L+  LCK G++
Sbjct: 569 KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEV 628

Query: 371 D 373
           D
Sbjct: 629 D 629



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/124 (29%), Positives = 63/124 (50%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
            N   + I +   G+ G ++ A  + +RM +EG  PD+ +Y++++D LC   K+D A   F
Sbjct: 927  NCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYF 986

Query: 182  EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            E++K S   PD V Y  +++       ++     + EM   G T D+ T+  LI  L   
Sbjct: 987  EELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA 1046

Query: 362  GKID 373
            G ++
Sbjct: 1047 GMVE 1050



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/124 (31%), Positives = 66/124 (53%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N Y++   I +L ++G   EA ++ +RM  EG  P + TY+ L+ AL   R ++T   + 
Sbjct: 191 NGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLL 250

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           ++M++   +P+  T+   +      G +D        M+  G   DVVT+TVLI ALC  
Sbjct: 251 QEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNA 310

Query: 362 GKID 373
           GK++
Sbjct: 311 GKLN 314



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/124 (29%), Positives = 65/124 (52%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V TFTI I  L + GK+DEA+  L  M ++G  P++ TY  LI  L    +LD A E+F
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
             M++   +    TYI  +D +   G+       + +M+ +G   ++V     + +L + 
Sbjct: 426 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 485

Query: 362 GKID 373
           G+++
Sbjct: 486 GRLE 489



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 35/159 (22%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTV------------------ 127
            +V+T+ + +  LG++GKI E + + + M   GC P+ +T+ +                  
Sbjct: 822  DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 128  -----------------LIDALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLDKFSDC 256
                             LID L    +L+ AK+ FE+M      P+   Y  L++ F   
Sbjct: 882  YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941

Query: 257  GDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            GD++   + +  M  +G   D+ ++++++  LC VGK+D
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +2

Query: 8   YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
           YT+ + I   G++G+  +A +  ++M   G  P++V     + +L    +L+ AKE F  
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497

Query: 188 MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
           +K     PD +TY  L+  +   G +D      SEME +G   +VV    LI  L K  +
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557

Query: 368 ID 373
           +D
Sbjct: 558 VD 559



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/107 (32%), Positives = 51/107 (47%)
 Frame = +2

Query: 47  GKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCHKPDQVTY 226
           G +D        M+ +G  PDVVT+T+LIDALC   K+D A    + MK     P+  TY
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTY 405

Query: 227 ITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
            TL+        LD   + ++ ME+ G      T+ + I    K G+
Sbjct: 406 NTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +2

Query: 26   IRVLGRAGKIDEAYRILKRMDREGC-GPDVVTYTVLIDALCTARKLDTAKEVFEKMKASC 202
            ++ L + GK  +AY +  ++ +  C  P +  Y  LID L  AR  + A  +F KMK + 
Sbjct: 759  VKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAG 818

Query: 203  HKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
              PD  TY   LD     G +  + D + EM   G   + +T  ++I  L K   +D
Sbjct: 819  CTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLD 875



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/121 (24%), Positives = 59/121 (48%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            +++I +  L   GK+D+A    + +   G  PD+V Y ++I+ L  +++++ A  +F++M
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
            +     PD  TY  L+      G ++     + E++  G   +V T+  LI      G  
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 371  D 373
            D
Sbjct: 1085 D 1085



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/116 (28%), Positives = 57/116 (49%)
 Frame = +2

Query: 26  IRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCH 205
           I  L +A ++DEA+++ +RM      P VVTY  L+  L    ++  A  +F+ M A   
Sbjct: 549 IDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDC 608

Query: 206 KPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            P+ +++ TLLD     G++D        M       DV+T+  +I  L K  +++
Sbjct: 609 PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVN 664



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/122 (23%), Positives = 63/122 (51%)
 Frame = +2

Query: 8    YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
            +T+   I  L + G+++EA +  + M   GC P+   Y +L++       ++TA E+F +
Sbjct: 894  WTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRR 953

Query: 188  MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
            M     +PD  +Y  ++D     G +D    ++ E++  G   D+V + ++I+ L +  +
Sbjct: 954  MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013

Query: 368  ID 373
            ++
Sbjct: 1014 VE 1015


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score =  208 bits (529), Expect = 4e-52
 Identities = 96/124 (77%), Positives = 111/124 (89%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N+YT+TICIRVLGRAG+IDEA RI+KRM+ +GCGPDVVTYTVLIDALCTA KLD A E+F
Sbjct: 263 NIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELF 322

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            KMKAS HKPD+VTYIT+LDKFSDCGDL  V++FWSEMEADGY  DV+TFT+L++ALCK 
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382

Query: 362 GKID 373
           G ID
Sbjct: 383 GNID 386



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/124 (35%), Positives = 65/124 (52%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N Y++   I +L ++G   EA  + +RM  EG  P + T++ L+ A    R  +T K + 
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           E+M++   KP+  TY   +      G +D        ME DG   DVVT+TVLI ALC  
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312

Query: 362 GKID 373
           GK+D
Sbjct: 313 GKLD 316



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/123 (30%), Positives = 65/123 (52%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V TFTI +  L +AG IDEA+ +L  M ++G  P++ TY  LI  L    +LD A ++F
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
             M+     P   TYI  +D +   G  D   + + +M+  G   ++V     + +L ++
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487

Query: 362 GKI 370
           G++
Sbjct: 488 GRL 490



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/121 (28%), Positives = 63/121 (52%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+ + ++   +AG++DEA  +L  M    C PD++    LI+ L  A ++D A ++F ++
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
           K     P  VTY TL+      G +    + ++ M  +G   + +TF  ++  LCK  ++
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 371 D 373
           D
Sbjct: 631 D 631



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/120 (30%), Positives = 61/120 (50%)
 Frame = +2

Query: 14   FTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMK 193
            + I I   G+ G ++ A  + KRM REG  PD+ +YT L+  LC A ++D A   FEK+K
Sbjct: 933  YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992

Query: 194  ASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
             +    D + Y  ++D       ++     + EM++ G   D+ T+  LI  L   G ++
Sbjct: 993  QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/122 (27%), Positives = 64/122 (52%)
 Frame = +2

Query: 8   YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
           YT+ + I   G++G+ D+A    ++M   G  P++V     + +L    +L  AK +F +
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNR 499

Query: 188 MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
           +K++   PD VTY  ++  +S  G +D   +  S+M  +    D++    LI+ L K G+
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559

Query: 368 ID 373
           +D
Sbjct: 560 VD 561



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 35/159 (22%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLI---------------- 133
            +V+T+ + +   G++GKI+E + + ++M    C P+ +T+ ++I                
Sbjct: 824  DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF 883

Query: 134  -------------------DALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLDKFSDC 256
                               D L  + +L+ AKE+FE+M     +P+   Y  L++ F   
Sbjct: 884  YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKT 943

Query: 257  GDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            GD++   + +  M  +G   D+ ++T L+  LC+ G++D
Sbjct: 944  GDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/104 (26%), Positives = 54/104 (51%)
 Frame = +2

Query: 62   AYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLD 241
            A+ +   M   GC PDV TY +L+DA   + K++   E++E+M  S  KP+ +T+  ++ 
Sbjct: 809  AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIA 868

Query: 242  KFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
                   LD   D + ++ +  ++    T+  L+  L K G+++
Sbjct: 869  NLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLE 912



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/109 (30%), Positives = 53/109 (48%)
 Frame = +2

Query: 26  IRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCH 205
           I  L +AG++DEA+++  R+      P VVTY  LI  L    ++  A E+F  M  +  
Sbjct: 551 INTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGC 610

Query: 206 KPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISAL 352
            P+ +T+ T+LD      ++D       +M       DV+TF  +I  L
Sbjct: 611 PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/111 (23%), Positives = 59/111 (53%)
 Frame = +2

Query: 41   RAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCHKPDQV 220
            ++G+++EA  + + M   GC P+   Y +LI+       ++TA E+F++M     +PD  
Sbjct: 907  KSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLK 966

Query: 221  TYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            +Y +L+    + G +D    ++ +++  G   D + + ++I  L +  +I+
Sbjct: 967  SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/121 (23%), Positives = 60/121 (49%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            ++T  +  L  AG++D+A    +++ + G   D + Y ++ID L  + +++ A  ++++M
Sbjct: 967  SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
            ++    PD  TY +L+      G ++     + E++  G   +V T+  LI      G  
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNS 1086

Query: 371  D 373
            D
Sbjct: 1087 D 1087


>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
           gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
           gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
           thaliana] gi|7270088|emb|CAB79903.1| putative protein
           [Arabidopsis thaliana] gi|332660567|gb|AEE85967.1|
           proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/121 (81%), Positives = 107/121 (88%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           NVYTFTICIRVLGRAGKI+EAY ILKRMD EGCGPDVVTYTVLIDALCTARKLD AKEVF
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           EKMK   HKPD+VTYITLLD+FSD  DLD+V+ FWSEME DG+  DVVTFT+L+ ALCK 
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376

Query: 362 G 364
           G
Sbjct: 377 G 377



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/116 (33%), Positives = 59/116 (50%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+ + ++   + G+IDEA ++L  M   GC PDV+    LI+ L  A ++D A ++F +M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCK 358
           K    KP  VTY TLL      G +    + +  M   G   + +TF  L   LCK
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
            N   + I I   G+AG+ D A  + KRM +EG  PD+ TY+VL+D LC   ++D     F
Sbjct: 925  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984

Query: 182  EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEAD-GYTADVVTFTVLISALCK 358
            +++K S   PD V Y  +++       L+     ++EM+   G T D+ T+  LI  L  
Sbjct: 985  KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044

Query: 359  VGKID 373
             G ++
Sbjct: 1045 AGMVE 1049



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/122 (31%), Positives = 62/122 (50%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V TFTI +  L +AG   EA+  L  M  +G  P++ TY  LI  L    +LD A E+F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
             M++   KP   TYI  +D +   GD  +  + + +M+  G   ++V     + +L K 
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481

Query: 362 GK 367
           G+
Sbjct: 482 GR 483



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRIL-KRMDREGCGPDVVTYTVLIDALCTARKLDTAKEV 178
            N  T  I I  L +AG +D+A  +    M      P   TY  LID L  + +L  AK++
Sbjct: 854  NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913

Query: 179  FEKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCK 358
            FE M     +P+   Y  L++ F   G+ DA    +  M  +G   D+ T++VL+  LC 
Sbjct: 914  FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973

Query: 359  VGKID 373
            VG++D
Sbjct: 974  VGRVD 978



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/124 (29%), Positives = 63/124 (50%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N Y++   I +L ++    EA  + +RM  EG  P + TY+ L+  L   R +D+   + 
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           ++M+    KP+  T+   +      G ++   +    M+ +G   DVVT+TVLI ALC  
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306

Query: 362 GKID 373
            K+D
Sbjct: 307 RKLD 310



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/122 (28%), Positives = 60/122 (49%)
 Frame = +2

Query: 8   YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
           YT+ + I   G++G    A    ++M  +G  P++V     + +L  A +   AK++F  
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493

Query: 188 MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
           +K     PD VTY  ++  +S  G++D      SEM  +G   DV+    LI+ L K  +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553

Query: 368 ID 373
           +D
Sbjct: 554 VD 555



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = +2

Query: 26   IRVLGRAGKIDEAYRILKRMDRE-GCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASC 202
            IR   +   +  A  + ++  ++ G  P + TY +LI  L  A  ++ A++VF ++K++ 
Sbjct: 756  IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 203  HKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
              PD  TY  LLD +   G +D + + + EM      A+ +T  ++IS L K G +D
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/121 (28%), Positives = 63/121 (52%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            T+   I  L ++G++ EA ++ + M   GC P+   Y +LI+    A + D A  +F++M
Sbjct: 893  TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
                 +PD  TY  L+D     G +D    ++ E++  G   DVV + ++I+ L K  ++
Sbjct: 953  VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012

Query: 371  D 373
            +
Sbjct: 1013 E 1013



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
 Frame = +2

Query: 5   VYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTA-KEVF 181
           V T+   +  LG+ GKI EA  + + M ++GC P+ +T+  L D LC   ++  A K +F
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           + M   C  PD  TY T++      G +     F+ +M+   Y  D VT   L+  + K 
Sbjct: 633 KMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKA 690

Query: 362 GKID 373
             I+
Sbjct: 691 SLIE 694


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
           predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  204 bits (520), Expect = 5e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N+YT+TICIRVLGR GKIDEAYRI+KRMD +GCGPDVVTYTVLIDALCTARKLD A  +F
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            KMK+S HKPD+VTY+TLLDKFSDCG LD V   W+EMEADGY  DVVTFT+L++ALCK 
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382

Query: 362 GKID 373
           G+I+
Sbjct: 383 GRIN 386



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/124 (33%), Positives = 63/124 (50%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
            N   + I +   G+ G +D A    KRM +EG  PD+ +YT+L+D LC A ++D A   F
Sbjct: 929  NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYF 988

Query: 182  EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            EK+K +   PD V Y  +++        +     + EM+  G   D+ T+  LI  L  V
Sbjct: 989  EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048

Query: 362  GKID 373
            G I+
Sbjct: 1049 GMIE 1052



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/123 (31%), Positives = 69/123 (56%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V TFTI +  L +AG+I+EA+ +L  M ++G  P++ TY  LI  L  A +LD A ++F
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 427

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
             M++   +P   TYI L+D     G      + + +M+A G   ++V     + +L ++
Sbjct: 428 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM 487

Query: 362 GKI 370
           G++
Sbjct: 488 GRL 490



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/121 (28%), Positives = 61/121 (50%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+ + ++   + G++DEA ++L  M +  C PDV+    LID L  A +++ A ++F +M
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
           +     P  VTY  LL      G +      +  M   G + + +TF  L+  LCK  ++
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 371 D 373
           D
Sbjct: 631 D 631



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/124 (32%), Positives = 62/124 (50%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N Y++   I  L ++G   EA  + +RM  EG  P + T++ L+ A    R + T   + 
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           E+M++   +P+  TY   +      G +D        M+ DG   DVVT+TVLI ALC  
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312

Query: 362 GKID 373
            K+D
Sbjct: 313 RKLD 316



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/118 (30%), Positives = 60/118 (50%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+   +      G +D+  +I   M+ +G  PDVVT+T+L++ALC A +++ A ++ + M
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVG 364
           +     P+  TY TL+        LD   D +S ME+ G      T+ +LI    K G
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 35/159 (22%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTV------------------ 127
            + +T+   I   G++GKI+E + +   M   GC P+ +TY +                  
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883

Query: 128  -----------------LIDALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLDKFSDC 256
                             LID L  + +LD A E+F+ M     +P+   Y  L++ +   
Sbjct: 884  YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943

Query: 257  GDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            G +D   +F+  M  +G   D+ ++T+L+  LC  G++D
Sbjct: 944  GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVD 982



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/122 (28%), Positives = 59/122 (48%)
 Frame = +2

Query: 8   YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
           YT+ + I   G++G   +A    ++M   G  P++V     + +L    +L  AK +F +
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499

Query: 188 MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
           +K+S   PD VTY  ++  +S  G +D      SEM       DV+    LI  L K G+
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559

Query: 368 ID 373
           ++
Sbjct: 560 VE 561



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/123 (28%), Positives = 60/123 (48%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V      I  L +AG+++EA+++  RM+     P VVTY +L+  L    ++  A ++F
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           E M      P+ +T+ TLLD      ++D     + +M       DV+TF  +I    K 
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662

Query: 362 GKI 370
            +I
Sbjct: 663 NQI 665



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 26   IRVLGRAGKIDEAYRILKRMDRE-GCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASC 202
            I+VL +  K   A  +  +  +E G  P +  Y +LID       ++ A  +FE+MK++ 
Sbjct: 761  IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820

Query: 203  HKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
              PD  TY +L+D     G ++ + D + EM   G   + +T+ ++IS L K  ++D
Sbjct: 821  CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD 877



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/114 (27%), Positives = 59/114 (51%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            TF   I  L ++G++D+A+ +   M   GC P+   Y +L++       +DTA E F++M
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISAL 352
                 +PD  +Y  L+D     G +D    ++ +++  G   D+V + ++I+ L
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/111 (26%), Positives = 60/111 (54%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            ++TI + +L  AG++D+A    +++ + G  PD+V Y ++I+ L  +++ + A  +F +M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLI 343
            +     PD  TY +L+      G ++     + E++  G   +V T+  LI
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/107 (27%), Positives = 53/107 (49%)
 Frame = +2

Query: 53   IDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCHKPDQVTYIT 232
            ++ A+ + + M   GC PD  TY  LIDA   + K++   +++++M     KP+ +TY  
Sbjct: 806  VEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNM 865

Query: 233  LLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
            ++        LD   D +  + +  ++    TF  LI  L K G++D
Sbjct: 866  VISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD 912


>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
           ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
          Length = 1114

 Score =  202 bits (515), Expect = 2e-50
 Identities = 98/121 (80%), Positives = 105/121 (86%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           NVYTFTICIRVLGRAGKI+EAY ILKRMD EGCGPDVVTYTVLIDALCTARKLD AKEVF
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 318

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
            KMK   HKPD+VTYITLLD+FSD  DLD+V  FWSEME DG+  DVVTFT+L+ ALCK 
Sbjct: 319 AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKA 378

Query: 362 G 364
           G
Sbjct: 379 G 379



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/122 (31%), Positives = 63/122 (51%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           +V TFTI +  L +AG   EA+  L  M  +G  P++ TY  LI  L    +LD A E+F
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           + M++   KP   TYI  +D +   GD  +  + + +M+  G   ++V     + +L K 
Sbjct: 424 DNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 483

Query: 362 GK 367
           G+
Sbjct: 484 GR 485



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
            N   + I I   G+AG+ D A  + KRM +EG  PD+ TY+VL+D LC   ++D     F
Sbjct: 927  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 986

Query: 182  EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEM-EADGYTADVVTFTVLISALCK 358
             ++K S   PD V Y  +++       L+     ++EM ++ G T D+ T+  LI  L  
Sbjct: 987  RELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGI 1046

Query: 359  VGKID 373
             G ++
Sbjct: 1047 AGMVE 1051



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/116 (32%), Positives = 58/116 (50%)
 Frame = +2

Query: 11  TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
           T+ + ++   + G+IDEA ++L  M    C PDV+    LI+ L  A ++D A ++F +M
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 566

Query: 191 KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCK 358
           K    KP  VTY TLL      G +    + +  M   G   + +TF  L   LCK
Sbjct: 567 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 36/160 (22%)
 Frame = +2

Query: 2    NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTV------------------ 127
            +V T+   +   G++GKIDE + I K M    C P+ +T+ +                  
Sbjct: 821  DVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLY 880

Query: 128  ------------------LIDALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLDKFSD 253
                              LID L  + +L  AK++FE M     +P+   Y  L++ F  
Sbjct: 881  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940

Query: 254  CGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
             G+ DA    +  M  +G   D+ T++VL+  LC VG++D
Sbjct: 941  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 980



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/124 (28%), Positives = 63/124 (50%)
 Frame = +2

Query: 2   NVYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVF 181
           N Y++   I +L ++    EA  + +RM  +G  P + TY+ L+  L   R +++   + 
Sbjct: 189 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLL 248

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           ++M+    KP+  T+   +      G ++   +    M+ +G   DVVT+TVLI ALC  
Sbjct: 249 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 308

Query: 362 GKID 373
            K+D
Sbjct: 309 RKLD 312



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/121 (28%), Positives = 63/121 (52%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            T+   I  L ++G++ EA ++ + M   GC P+   Y +LI+    A + D A  +F++M
Sbjct: 895  TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGKI 370
                 +PD  TY  L+D     G +D    ++ E++  G   DVV + ++I+ L K  ++
Sbjct: 955  VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRL 1014

Query: 371  D 373
            +
Sbjct: 1015 E 1015



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +2

Query: 5   VYTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTA-KEVF 181
           V T+   +  LG+ GKI EA  + + M ++GC P+ +T+  L D LC   ++  A K +F
Sbjct: 575 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 634

Query: 182 EKMKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKV 361
           + M   C  PD  TY T++      G +     F+ +M+   Y  D VT   L+  + K 
Sbjct: 635 KMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKA 692

Query: 362 GKID 373
           G I+
Sbjct: 693 GLIE 696



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/93 (33%), Positives = 50/93 (53%)
 Frame = +2

Query: 95   GCGPDVVTYTVLIDALCTARKLDTAKEVFEKMKASCHKPDQVTYITLLDKFSDCGDLDAV 274
            G  P + TY +LI  L  A  ++ A++VF ++K +   PD  TY  LLD +   G +D +
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 275  RDFWSEMEADGYTADVVTFTVLISALCKVGKID 373
             + + EM A     + +T  ++IS L K G +D
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVD 874



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/122 (27%), Positives = 59/122 (48%)
 Frame = +2

Query: 8   YTFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEK 187
           YT+ + I   G++G    A    ++M  +G  P++V     + +L  A +   AK++F  
Sbjct: 436 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 495

Query: 188 MKASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEADGYTADVVTFTVLISALCKVGK 367
           +K     PD VTY  ++  +S  G++D      SEM  +    DV+    LI+ L K  +
Sbjct: 496 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADR 555

Query: 368 ID 373
           +D
Sbjct: 556 VD 557



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
 Frame = +2

Query: 11   TFTICIRVLGRAGKIDEAYRILKRMDREGCGPDVVTYTVLIDALCTARKLDTAKEVFEKM 190
            T+ + I  L  A  I+ A  +  ++   GC PDV TY  L+DA   + K+D   E++++M
Sbjct: 789  TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848

Query: 191  KASCHKPDQVTYITLLDKFSDCGDLDAVRDFWSEMEAD-GYTADVVTFTVLISALCKVGK 367
             A   +P+ +T+  ++      G++D   D + ++ +D  ++    T+  LI  L K G+
Sbjct: 849  SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908

Query: 368  I 370
            +
Sbjct: 909  L 909