BLASTX nr result

ID: Cnidium21_contig00048421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048421
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   125   3e-27
emb|CAA72990.1| unnamed protein product [Brassica oleracea var. ...   124   1e-26
emb|CAN75312.1| hypothetical protein VITISV_033326 [Vitis vinifera]   122   4e-26
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   120   9e-26
emb|CAN63141.1| hypothetical protein VITISV_034574 [Vitis vinifera]   120   1e-25

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/107 (53%), Positives = 79/107 (73%)
 Frame = +2

Query: 5   LKLSNSDGDLISNPELYRSLVGKLNYLTNTRPDLSYTIQSLSQYMHAPRTTHLLALHHTI 184
           LKLS+  G+L+ +P  YR LVGKLNYLT+TRPD+S+ +Q+LSQ+M +PR+ HL A +HT+
Sbjct: 148 LKLSSISGELLQDPTFYRRLVGKLNYLTHTRPDISFAVQTLSQHMQSPRSGHLEAAYHTL 207

Query: 185 RYLAGSITQGILLKATDQLKLKAFSDADWASCIDSRRSVTGYLLLLG 325
           RY+  +   GI L +    +L  F DADWASC DSRRS++G+ L +G
Sbjct: 208 RYIRNNPGLGIFLSSEQSFQLTGFCDADWASCPDSRRSISGFFLTMG 254


>emb|CAA72990.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 253

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/109 (50%), Positives = 80/109 (73%)
 Frame = +2

Query: 2   HLKLSNSDGDLISNPELYRSLVGKLNYLTNTRPDLSYTIQSLSQYMHAPRTTHLLALHHT 181
           +LKLS  DGDLI + E+YR LVG+L YLT TRPD+++ +  L Q+  APRT+HL A++  
Sbjct: 14  NLKLSKVDGDLIEDREMYRRLVGRLMYLTITRPDITFAVNKLCQFSSAPRTSHLGAVYKV 73

Query: 182 IRYLAGSITQGILLKATDQLKLKAFSDADWASCIDSRRSVTGYLLLLGN 328
           ++Y+ G++ QG+   A   L LK F+DADWA+C+DSRRS TG+ + +G+
Sbjct: 74  LQYIKGTVGQGLFYSAHSDLTLKGFADADWAACVDSRRSTTGFTMFVGD 122


>emb|CAN75312.1| hypothetical protein VITISV_033326 [Vitis vinifera]
          Length = 326

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/109 (49%), Positives = 79/109 (72%)
 Frame = +2

Query: 2   HLKLSNSDGDLISNPELYRSLVGKLNYLTNTRPDLSYTIQSLSQYMHAPRTTHLLALHHT 181
           ++KL   +GDL+++P LYR LVG L YLT TRPD+S+ +Q +SQ++  PR  HL A+   
Sbjct: 87  NVKLRKEEGDLLADPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAVRRI 146

Query: 182 IRYLAGSITQGILLKATDQLKLKAFSDADWASCIDSRRSVTGYLLLLGN 328
           IRY+ G+ T+G+ L A +  +L A+SDADWA C D+RRS+TG+ + LG+
Sbjct: 147 IRYVQGTSTRGLFLPAGNSTRLAAYSDADWAGCADTRRSITGWCVFLGD 195


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/106 (54%), Positives = 74/106 (69%)
 Frame = +2

Query: 8    KLSNSDGDLISNPELYRSLVGKLNYLTNTRPDLSYTIQSLSQYMHAPRTTHLLALHHTIR 187
            KL  + GDL+ NP +YR LVG+L YLT TRP++SY+I  LSQ+M  PR  HL A+HH +R
Sbjct: 802  KLLPTVGDLLKNPSIYRRLVGQLIYLTITRPEISYSIHILSQFMQEPRKPHLHAVHHLLR 861

Query: 188  YLAGSITQGILLKATDQLKLKAFSDADWASCIDSRRSVTGYLLLLG 325
            YL G++ QG+   A   L L+ F DADWA C  +RRSVTGY + LG
Sbjct: 862  YLKGALGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLG 907


>emb|CAN63141.1| hypothetical protein VITISV_034574 [Vitis vinifera]
          Length = 326

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/109 (48%), Positives = 78/109 (71%)
 Frame = +2

Query: 2   HLKLSNSDGDLISNPELYRSLVGKLNYLTNTRPDLSYTIQSLSQYMHAPRTTHLLALHHT 181
           ++KL   +GDL+++P LYR LVG L YLT TRPD+S+ +Q +SQ++  PR  HL A+   
Sbjct: 87  NVKLRKEEGDLLADPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAVRRI 146

Query: 182 IRYLAGSITQGILLKATDQLKLKAFSDADWASCIDSRRSVTGYLLLLGN 328
           IRY+ G+ T+G+   A +  +L A+SDADWA C D+RRS+TG+ + LG+
Sbjct: 147 IRYVQGTSTRGLFFPAGNSTRLAAYSDADWAGCADTRRSITGWCVFLGD 195


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