BLASTX nr result

ID: Cnidium21_contig00048406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048406
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vi...    67   1e-09
emb|CAN75617.1| hypothetical protein VITISV_010165 [Vitis vinifera]    66   3e-09
ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    64   1e-08
ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vi...    64   1e-08
ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vi...    64   1e-08

>ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/96 (39%), Positives = 55/96 (57%)
 Frame = +2

Query: 2    VKGFRLRLTGCSKVRIDNKSFAKMNKLRLLKFHYKPLELPANGYAHRNIIFEGTKVDHSK 181
            ++G  L L+  +++ I  ++FA M  LRLLK H+  LE  +          E  KV  SK
Sbjct: 740  IEGILLNLSRLTRIHITTEAFAMMKNLRLLKIHWD-LESASTR--------EDNKVKLSK 790

Query: 182  NLEYLSNDLRLLSWHGFPFEFLPTAFYPEFLVSLNL 289
            + E+ S++LR L WHG+P E LP  FY E LV L++
Sbjct: 791  DFEFPSHELRYLHWHGYPLESLPLGFYAEDLVELDM 826


>emb|CAN75617.1| hypothetical protein VITISV_010165 [Vitis vinifera]
          Length = 608

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   VKGFRLRLTGCSKVRIDNKSFAKMNKLRLLKFHYKPLELPANGYAHRNIIF-EGTKVDHS 178
           +KG    L+   ++ I  KSF  M KLRLLK ++          AH +I   E  KV  S
Sbjct: 508 IKGILFNLSIPKRIHITTKSFEMMTKLRLLKIYW----------AHESISMREDNKVKLS 557

Query: 179 KNLEYLSNDLRLLSWHGFPFEFLPTAFYPEFLVSLNL 289
           K+ E+ S +LR L WHG+P E LP++FY   LV L++
Sbjct: 558 KDFEFPSYELRYLYWHGYPLESLPSSFYAVDLVELDM 594


>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/96 (40%), Positives = 54/96 (56%)
 Frame = +2

Query: 2   VKGFRLRLTGCSKVRIDNKSFAKMNKLRLLKFHYKPLELPANGYAHRNIIFEGTKVDHSK 181
           ++G  L L G  ++    ++FA+M KLRLLK  Y         YA RN   E  K   S+
Sbjct: 543 IEGIFLNLYGLKEIHYTTEAFAEMKKLRLLKV-YNSHNSGDFEYASRN---ENYKRPFSQ 598

Query: 182 NLEYLSNDLRLLSWHGFPFEFLPTAFYPEFLVSLNL 289
           + E+ SN LR L WH +P + LP+ F+P+ LV LNL
Sbjct: 599 DFEFPSNKLRYLYWHRYPLKSLPSNFHPKNLVELNL 634


>ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/96 (40%), Positives = 54/96 (56%)
 Frame = +2

Query: 2    VKGFRLRLTGCSKVRIDNKSFAKMNKLRLLKFHYKPLELPANGYAHRNIIFEGTKVDHSK 181
            ++G  L L+   ++ I  ++FA M  LRLLK ++  LE     YA      E  KV  SK
Sbjct: 744  IEGILLNLSRLMRIHISTEAFAMMKNLRLLKIYWD-LE-----YAFMR---EDNKVKLSK 794

Query: 182  NLEYLSNDLRLLSWHGFPFEFLPTAFYPEFLVSLNL 289
            + E+ S +LR L WHG+P E LP  FY E LV L++
Sbjct: 795  DFEFPSYELRYLHWHGYPLESLPLGFYAEDLVELDM 830


>ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
           gi|296081003|emb|CBI18507.3| unnamed protein product
           [Vitis vinifera]
          Length = 1281

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 11  FRLRLTGCSKVRIDNKSFAKMNKLRLLKFHYKPLELPANGYAHRNI-IFEGTKVDHSKNL 187
           F L +    ++ I  KSF  M +LRLLK ++          AH +I I E  KV  SK+ 
Sbjct: 541 FDLSIPKRKRIDITTKSFEMMTRLRLLKIYW----------AHGSISIREDNKVKLSKDF 590

Query: 188 EYLSNDLRLLSWHGFPFEFLPTAFYPEFLVSLNL 289
           E+ S +LR L WHG+P E LP++FY E L+ L++
Sbjct: 591 EFPSYELRYLYWHGYPLESLPSSFYAEDLIELDM 624


Top