BLASTX nr result

ID: Cnidium21_contig00048367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048367
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   127   7e-28
ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...   127   9e-28
ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc...   127   9e-28
ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   126   2e-27
emb|CBI19050.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
 Frame = -3

Query: 325  DIVVHRTLSAAVEAEAIYTKKNNML--NFNEDRTKRCFTGMYFNKDAIESREGQEALSVA 152
            DI+VHRTL+AA+EAE +Y +   +       D+  RCFTG+YF+KDA ES EG+EALS A
Sbjct: 833  DIIVHRTLAAAIEAEELYMRSRRISCKAGMGDKVMRCFTGIYFDKDAAESVEGKEALSAA 892

Query: 151  AAGHSVPCIEILKGVAAHCNERKLANRHVKDATDKLYMWLLVKEK 17
            A+ H +PC E L  V A+CN+RKLA+RHVKDA DKLYMW L+K K
Sbjct: 893  ASKHRIPCTESLANVVAYCNDRKLASRHVKDACDKLYMWALLKRK 937


>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
            sativus]
          Length = 1159

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = -3

Query: 325  DIVVHRTLSAAVEAEAIYTKKNNMLN-FNEDRTKRCFTGMYFNKDAIESREGQEALSVAA 149
            DIVVHRTL+AA+EAE +Y K   ++   N +   RCFTG+YF+KDA +S EG+EALS AA
Sbjct: 894  DIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNEETRCFTGIYFDKDAADSLEGREALSSAA 953

Query: 148  AGHSVPCIEILKGVAAHCNERKLANRHVKDATDKLYMW-LLVKEKVLYS 5
              H VPC ++L  VA HCN+RKLA++HV D  +KLYMW LL K+K+L+S
Sbjct: 954  LKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMWALLKKKKILFS 1002


>ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
          Length = 1125

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = -3

Query: 325  DIVVHRTLSAAVEAEAIYTKKNNMLN-FNEDRTKRCFTGMYFNKDAIESREGQEALSVAA 149
            DIVVHRTL+AA+EAE +Y K   ++   N +   RCFTG+YF+KDA +S EG+EALS AA
Sbjct: 859  DIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNEETRCFTGIYFDKDAADSLEGREALSSAA 918

Query: 148  AGHSVPCIEILKGVAAHCNERKLANRHVKDATDKLYMW-LLVKEKVLYS 5
              H VPC ++L  VA HCN+RKLA++HV D  +KLYMW LL K+K+L+S
Sbjct: 919  LKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMWALLKKKKILFS 967


>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/105 (57%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
 Frame = -3

Query: 325  DIVVHRTLSAAVEAEAIYTKKNNMLNF--NEDRTKRCFTGMYFNKDAIESREGQEALSVA 152
            DI+VHRTL+AA+EAE +Y K    +    N +  +RCFTG++F+K+A ES EGQ+ALSVA
Sbjct: 858  DIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRRCFTGIHFDKNAAESVEGQKALSVA 917

Query: 151  AAGHSVPCIEILKGVAAHCNERKLANRHVKDATDKLYMWLLVKEK 17
            A+ H +PC EIL  V A+CNERKLA+RH KD  ++LYMW+L+K+K
Sbjct: 918  ASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLKKK 962


>emb|CBI19050.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/105 (57%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
 Frame = -3

Query: 325  DIVVHRTLSAAVEAEAIYTKKNNMLNF--NEDRTKRCFTGMYFNKDAIESREGQEALSVA 152
            DI+VHRTL+AA+EAE +Y K    +    N +  +RCFTG++F+K+A ES EGQ+ALSVA
Sbjct: 759  DIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRRCFTGIHFDKNAAESVEGQKALSVA 818

Query: 151  AAGHSVPCIEILKGVAAHCNERKLANRHVKDATDKLYMWLLVKEK 17
            A+ H +PC EIL  V A+CNERKLA+RH KD  ++LYMW+L+K+K
Sbjct: 819  ASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLKKK 863


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