BLASTX nr result

ID: Cnidium21_contig00048358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048358
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64828.1| hypothetical protein [Beta vulgaris]                  108   6e-22
ref|XP_002466124.1| hypothetical protein SORBIDRAFT_01g001853 [S...    88   8e-16
ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [S...    87   2e-15
ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [S...    83   2e-14
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      83   2e-14

>dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
          Length = 1296

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/102 (46%), Positives = 72/102 (70%)
 Frame = +2

Query: 5    ERHNHRFVTGVGKQFLKANRTMTVAHQSFVFNCAKVKIGPNRAFGLMKEFVGGYEKVGAT 184
            E HNH F T     FLK +R +T+AH+ F+F+ +++ +GPN++F L+KE VGGYE VGA+
Sbjct: 1193 ESHNHVFATPKSMHFLKNSRNLTLAHKKFIFDNSRLNVGPNKSFRLIKEHVGGYENVGAS 1252

Query: 185  AVDFKNWNRDLRNVIGNADAQVILNKFESLKESSNGDFYYEY 310
             VDFKN++RD++  I + DA + +N F+    SS G F+++Y
Sbjct: 1253 LVDFKNFSRDVKAYIQDVDADMFVNNFKEKATSSGGGFFFDY 1294


>ref|XP_002466124.1| hypothetical protein SORBIDRAFT_01g001853 [Sorghum bicolor]
           gi|241919978|gb|EER93122.1| hypothetical protein
           SORBIDRAFT_01g001853 [Sorghum bicolor]
          Length = 205

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/103 (43%), Positives = 68/103 (66%)
 Frame = +2

Query: 2   VERHNHRFVTGVGKQFLKANRTMTVAHQSFVFNCAKVKIGPNRAFGLMKEFVGGYEKVGA 181
           VE HNH FV+   +  L++NR ++   +S +FNC K  IG ++AF L++   GG++ VG 
Sbjct: 96  VEEHNHGFVSPDKRHLLRSNRRVSGRAKSTLFNCHKASIGTSQAFRLLQVTDGGFQHVGC 155

Query: 182 TAVDFKNWNRDLRNVIGNADAQVILNKFESLKESSNGDFYYEY 310
           T  DFKN+ RDLR  I +ADAQ+ +++ E  KE +N  F+YE+
Sbjct: 156 TLRDFKNYYRDLRTKIKDADAQMFVHQLERKKE-ANPAFFYEF 197


>ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [Sorghum bicolor]
           gi|241918781|gb|EER91925.1| hypothetical protein
           SORBIDRAFT_01g028975 [Sorghum bicolor]
          Length = 471

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/103 (43%), Positives = 68/103 (66%)
 Frame = +2

Query: 2   VERHNHRFVTGVGKQFLKANRTMTVAHQSFVFNCAKVKIGPNRAFGLMKEFVGGYEKVGA 181
           VE HNH F++   +  L++NR ++   +S +FNC K  IG ++AF L++   GG+E VG 
Sbjct: 292 VEEHNHGFMSPDKRHLLRSNRQVSERAKSTLFNCHKASIGTSQAFRLLQVTDGGFEHVGC 351

Query: 182 TAVDFKNWNRDLRNVIGNADAQVILNKFESLKESSNGDFYYEY 310
           T  DFKN+ RDLR  I +ADAQ+ +++ E  KE +N  F+YE+
Sbjct: 352 TLRDFKNYYRDLRCRIKDADAQMFVHQLERKKE-ANPAFFYEF 393


>ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [Sorghum bicolor]
           gi|241916463|gb|EER89607.1| hypothetical protein
           SORBIDRAFT_10g010346 [Sorghum bicolor]
          Length = 261

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/103 (42%), Positives = 65/103 (63%)
 Frame = +2

Query: 2   VERHNHRFVTGVGKQFLKANRTMTVAHQSFVFNCAKVKIGPNRAFGLMKEFVGGYEKVGA 181
           VE HNH FV+   K  L++NR ++   +S +FNC K  IG ++ F L+    GG+E VG 
Sbjct: 152 VEEHNHGFVSPDKKHLLRSNRHVSERVKSTLFNCHKASIGMSQTFRLLHVSDGGFENVGC 211

Query: 182 TAVDFKNWNRDLRNVIGNADAQVILNKFESLKESSNGDFYYEY 310
           T  D KN+ RD R+ I +ADA++ +++FE  KE  N  F+YE+
Sbjct: 212 TLRDLKNYYRDSRSKIKDADAEMFVHQFERKKE-VNPAFFYEF 253


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/103 (33%), Positives = 67/103 (65%)
 Frame = +2

Query: 5   ERHNHRFVTGVGKQFLKANRTMTVAHQSFVFNCAKVKIGPNRAFGLMKEFVGGYEKVGAT 184
           E H+H  V+   +QFL++ R +T  H++ +F+C +  +G ++++ +MKE VG YE +G T
Sbjct: 195 EGHSHGLVSPSKRQFLRSARNVTSVHKNILFSCNRANVGTSKSYQIMKEQVGSYENIGCT 254

Query: 185 AVDFKNWNRDLRNVIGNADAQVILNKFESLKESSNGDFYYEYD 313
             D +N++R+L+ +I ++DA + ++ F   K   N  F+Y+Y+
Sbjct: 255 QRDLQNYSRNLKELIKDSDADMFIDNFRR-KREINPSFFYDYE 296


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