BLASTX nr result
ID: Cnidium21_contig00048343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00048343
(542 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 71 3e-20
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 69 1e-17
emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera] 62 1e-16
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212... 63 6e-16
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 64 7e-16
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 71.2 bits (173), Expect(2) = 3e-20
Identities = 37/100 (37%), Positives = 60/100 (60%)
Frame = +2
Query: 239 GPNNTFTGIRGQILIMKPLNSLS*CYAILLQEESQRVVHNSLSFNSNNVVMIVKSNYSAW 418
G +++++ IR Q+L+ PL S+S +++LLQEESQR + N++ + ++ M+ + +
Sbjct: 174 GLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNAVGISIDSQAMVAEQSSRTV 233
Query: 419 QQSKGVQNSFKKASDASIICDYCHMSGHLKDKCYCIHGYP 538
S K SDA IC +C SGHL DKC+ + GYP
Sbjct: 234 STSNTQFTKQKGKSDA--ICSHCGYSGHLVDKCFQLIGYP 271
Score = 52.0 bits (123), Expect(2) = 3e-20
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 EVHFAESNVPKLFYSRKEIAHLTQGTLSISAYFTKFRTLQDELECLYSKPQCSC---NH* 173
++ + S+ P++F K ++ ++Q + SI+ YF++F+ L DE P C C N
Sbjct: 92 KIRYLRSDGPRVFSLEKSLSSISQNSKSITEYFSEFKALWDEYISYRPIPSCRCGNLNRC 151
Query: 174 TCSVNGKLNDLDQSIQITQFLMGL 245
+C++ L D QS + +FL+GL
Sbjct: 152 SCNILKDLTDRQQSDYVMKFLVGL 175
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 69.3 bits (168), Expect(2) = 1e-17
Identities = 42/100 (42%), Positives = 55/100 (55%)
Frame = +2
Query: 239 GPNNTFTGIRGQILIMKPLNSLS*CYAILLQEESQRVVHNSLSFNSNNVVMIVKSNYSAW 418
G N+ F IRGQIL MKP L+ Y +L Q+ESQR+V N + ++ V+++
Sbjct: 226 GLNDNFAHIRGQILNMKPRPGLTEIYNMLDQDESQRLVGNP-TLSNPTAAFQVQASPIID 284
Query: 419 QQSKGVQNSFKKASDASIICDYCHMSGHLKDKCYCIHGYP 538
Q Q S+KK C YC+ GHL DKCY HGYP
Sbjct: 285 SQVNMAQGSYKKPK-----CSYCNKLGHLVDKCYKKHGYP 319
Score = 45.1 bits (105), Expect(2) = 1e-17
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 12 FAESNVPKLFYSRKEIAHLTQGTLSISAYFTKFRTLQDEL--ECLYSKPQCSCNH*TCSV 185
F SN+P+ + + I L QG L +S Y+TK +TL ++L + + +C+C H V
Sbjct: 153 FRVSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLANTRVLTVRKCNCEH----V 208
Query: 186 NGKLNDLDQSIQITQFLMGL 245
L + + S +I QFLMGL
Sbjct: 209 KELLEEAETS-RIIQFLMGL 227
>emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]
Length = 1002
Score = 61.6 bits (148), Expect(2) = 1e-16
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +2
Query: 224 HTVSY--GPNNTFTGIRGQILIMKPLNSLS*CYAILLQEESQRVVHNSLSFNSNNVVMIV 397
H + + G N++++ R QIL+M+P+ L+ +A++LQEE QR ++ S + +
Sbjct: 99 HVIQFLMGLNDSYSQTRSQILMMEPIPPLAKVFALVLQEERQRSINQGFSSLLQPLALGD 158
Query: 398 KSNYSAWQQSKGVQNSFKKASDASIICDYCHMSGHLKDKCYCIHGYP 538
S SA + + +S K C +C + GH D+CY +HGYP
Sbjct: 159 SSQASA---NTHIGSSASKPKFERPQCTHCGLQGHAMDRCYKLHGYP 202
Score = 49.7 bits (117), Expect(2) = 1e-16
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +3
Query: 12 FAESNVPKLFYSRKEIAHLTQGTLSISAYFTKFRTLQDELECLYSKPQCSCNH*TCSVNG 191
F +SN +F RK++ L QG L I+ Y+T+F+ L +EL+ P C C V
Sbjct: 35 FRQSNAHWIFQLRKQLIALQQGGLDINTYYTRFKVLWEELKNFQPLPACHCGGMQAWV-- 92
Query: 192 KLNDLDQSIQITQFLMGL 245
+ Q + QFLMGL
Sbjct: 93 ---EYQQQEHVIQFLMGL 107
>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
gi|449449869|ref|XP_004142687.1| PREDICTED:
uncharacterized protein LOC101213831 [Cucumis sativus]
Length = 440
Score = 63.2 bits (152), Expect(2) = 6e-16
Identities = 34/104 (32%), Positives = 55/104 (52%)
Frame = +2
Query: 227 TVSYGPNNTFTGIRGQILIMKPLNSLS*CYAILLQEESQRVVHNSLSFNSNNVVMIVKSN 406
T G N +++ IR QIL++ PL ++ +++++QEE QR + +S S S ++ +
Sbjct: 137 TFLMGLNESYSQIRAQILLIDPLPPINRVFSLIIQEERQRSIGSSPSIESIALMANSERR 196
Query: 407 YSAWQQSKGVQNSFKKASDASIICDYCHMSGHLKDKCYCIHGYP 538
+S+ + K D IC C GH DKCY +HGYP
Sbjct: 197 FSSDKSKK---------KDTRPICSNCGYKGHTADKCYKLHGYP 231
Score = 45.8 bits (107), Expect(2) = 6e-16
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 12 FAESNVPKLFYSRKEIAHLTQGTLSISAYFTKFRTLQDELECLYSKPQCSCNH*TCSVNG 191
+ +SN P ++ RK++ TQG+LS+ Y+ K T+ EL + +P C TC +
Sbjct: 70 YKQSNGPHIYQLRKDLVTTTQGSLSVEIYYAKITTIWQEL--VEYRPMDEC---TCEGSK 124
Query: 192 KLNDLDQSIQITQFLMGL 245
K+ D + + FLMGL
Sbjct: 125 KMIDFLNAEFVMTFLMGL 142
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 63.5 bits (153), Expect(2) = 7e-16
Identities = 33/100 (33%), Positives = 54/100 (54%)
Frame = +2
Query: 239 GPNNTFTGIRGQILIMKPLNSLS*CYAILLQEESQRVVHNSLSFNSNNVVMIVKSNYSAW 418
G N +++ IR QIL++ PL ++ +++++QEE QR + +S S S ++ + +S+
Sbjct: 1485 GLNESYSQIRAQILLIDPLPPINRVFSLIIQEERQRSIGSSPSIESITLMANSERRFSSD 1544
Query: 419 QQSKGVQNSFKKASDASIICDYCHMSGHLKDKCYCIHGYP 538
+ K D IC C GH DKCY +HGYP
Sbjct: 1545 KSKK---------KDTRPICSNCGYKGHTADKCYKLHGYP 1575
Score = 45.1 bits (105), Expect(2) = 7e-16
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 12 FAESNVPKLFYSRKEIAHLTQGTLSISAYFTKFRTLQDELECLYSKPQCSCNH*TCSVNG 191
+ +SN P ++ RK++ TQG+LS+ Y+ K T+ EL + +P C TC +
Sbjct: 1414 YKQSNGPHIYQLRKDLVTTTQGSLSVEIYYAKITTIWQEL--VEYRPMDEC---TCEGSK 1468
Query: 192 KLNDLDQSIQITQFLMGL 245
K+ D + + FLMGL
Sbjct: 1469 KMIDFLNAEFVMIFLMGL 1486