BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048340
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   127   2e-28
dbj|BAH00063.1| unnamed protein product [Oryza sativa Japonica G...   127   4e-28
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        125   2e-27
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     125   3e-27
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...   124   3e-27

>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  127 bits (318), Expect(2) = 2e-28
 Identities = 60/130 (46%), Positives = 86/130 (66%)
 Frame = +3

Query: 3    FTLINGDLKKNGKYYIRDNTDLRQSICSAVHSQGEVGYSDITTSIKRAERKFYWPTLRQD 182
            + L +G LK  G+ Y+ + T++R  +  A H+    G+S I  +  R ++ FYWP L++ 
Sbjct: 1169 YKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQ 1228

Query: 183  FTKFIQECDTWQRNKSEHNLYPGLLRPIEIPTQIWEVVSVDFIEGLPRSKGKDVILVVVD 362
               +I+EC T Q  K+EH   PGLL P+E+P   W  +++DFIEGLP+S+GKDVILVVVD
Sbjct: 1229 VEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVD 1288

Query: 363  KLTKYYHLLA 392
            +LTKY H LA
Sbjct: 1289 RLTKYAHFLA 1298



 Score = 23.9 bits (50), Expect(2) = 2e-28
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 392  MALTHPYTSTKVAQEFL 442
            +AL+HPYT  +V Q F+
Sbjct: 1297 LALSHPYTVEQVVQIFM 1313


>dbj|BAH00063.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 494

 Score =  127 bits (318), Expect(2) = 4e-28
 Identities = 62/130 (47%), Positives = 85/130 (65%)
 Frame = +3

Query: 3   FTLINGDLKKNGKYYIRDNTDLRQSICSAVHSQGEVGYSDITTSIKRAERKFYWPTLRQD 182
           FTL NG L    + +I  N+ ++Q I + +H+    G+S I  + +R ++ F WP LR D
Sbjct: 172 FTLKNGILYFQDRIWIGQNSSVQQKILANLHTAAIGGHSGIQVTYQRIKQLFAWPGLRAD 231

Query: 183 FTKFIQECDTWQRNKSEHNLYPGLLRPIEIPTQIWEVVSVDFIEGLPRSKGKDVILVVVD 362
             +F+Q CD  QR KSEH  YPG L+P+ +P Q W+VVS+DFIEGLPRS   + ILVVVD
Sbjct: 232 VVRFVQSCDICQRAKSEHVRYPGFLQPLPVPDQYWQVVSLDFIEGLPRSASFNCILVVVD 291

Query: 363 KLTKYYHLLA 392
           K +KY H +A
Sbjct: 292 KFSKYAHFVA 301



 Score = 22.7 bits (47), Expect(2) = 4e-28
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 392 MALTHPYTSTKVAQEFL 442
           +AL HP+T+ +VA+ ++
Sbjct: 300 VALAHPFTALEVAESYV 316


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  125 bits (314), Expect(2) = 2e-27
 Identities = 57/130 (43%), Positives = 82/130 (63%)
 Frame = +3

Query: 3    FTLINGDLKKNGKYYIRDNTDLRQSICSAVHSQGEVGYSDITTSIKRAERKFYWPTLRQD 182
            +TL +G L+   + Y+   TDLR  +  + H     G+S    + +RA+  FYWP +++D
Sbjct: 869  YTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKD 928

Query: 183  FTKFIQECDTWQRNKSEHNLYPGLLRPIEIPTQIWEVVSVDFIEGLPRSKGKDVILVVVD 362
               +++ C   Q+NKSEHNL PGLL P+ IP   W  +S+DFIEGLP+S  KDVI V+VD
Sbjct: 929  IASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVD 988

Query: 363  KLTKYYHLLA 392
            + TKY H +A
Sbjct: 989  RFTKYAHFVA 998



 Score = 21.9 bits (45), Expect(2) = 2e-27
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 392  MALTHPYTSTKVAQEFL 442
            +AL+HP+T+ ++  +F+
Sbjct: 997  VALSHPFTADQIVTQFV 1013


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/130 (46%), Positives = 85/130 (65%)
 Frame = +3

Query: 3    FTLINGDLKKNGKYYIRDNTDLRQSICSAVHSQGEVGYSDITTSIKRAERKFYWPTLRQD 182
            + L  G LK  G+ Y+ + TD+R+ + +  HS    G+S +  +  R +  FYW  +R +
Sbjct: 1033 YKLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGE 1092

Query: 183  FTKFIQECDTWQRNKSEHNLYPGLLRPIEIPTQIWEVVSVDFIEGLPRSKGKDVILVVVD 362
              +FI+EC T Q  KSEH   PGLL P+EIP   W  +++DFIEGLP+S+GKDVILVVVD
Sbjct: 1093 VERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVD 1152

Query: 363  KLTKYYHLLA 392
            +LTKY H +A
Sbjct: 1153 RLTKYAHFIA 1162


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  124 bits (312), Expect(2) = 3e-27
 Identities = 56/130 (43%), Positives = 81/130 (62%)
 Frame = +3

Query: 3   FTLINGDLKKNGKYYIRDNTDLRQSICSAVHSQGEVGYSDITTSIKRAERKFYWPTLRQD 182
           +TL  G L+   + Y+   TDLR  +  + H     G+S    + +RA+  FYWP +++D
Sbjct: 282 YTLTGGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKD 341

Query: 183 FTKFIQECDTWQRNKSEHNLYPGLLRPIEIPTQIWEVVSVDFIEGLPRSKGKDVILVVVD 362
              +++ C   Q+NKSEHNL PGLL P+ +P   W  +S+DFIEGLP+S  KDVI V+VD
Sbjct: 342 IASYVKLCPVCQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIEGLPKSDNKDVIWVIVD 401

Query: 363 KLTKYYHLLA 392
           + TKY H +A
Sbjct: 402 RFTKYAHFVA 411



 Score = 21.9 bits (45), Expect(2) = 3e-27
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 392 MALTHPYTSTKVAQEFL 442
           +AL+HP+T+ ++  +F+
Sbjct: 410 VALSHPFTADQIVTQFV 426