BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048292
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   137   1e-30
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   129   2e-28
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   121   7e-26
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...   119   3e-25
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   118   4e-25

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/126 (54%), Positives = 84/126 (66%)
 Frame = -1

Query: 380  VNLIKAQNIMKTAADTKRRDDSFTIGDWVFVKLQPYRQRSLARRPYEKLAPRFYGPFRVI 201
            VNL++AQ  MK  AD  R +  F +GD VF++LQPYRQRSLA+RP+EKLAPRFYGPF V+
Sbjct: 1429 VNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVL 1488

Query: 200  ECIGRVAYKLELPEQSKVHPVFHVSQLKRSVGTQPFSTVIPPQISXXXXXXXXXXXXXXV 21
            + IG  AYKL+LP  SK+HPVFHVS LK+ VG  P    IPP I               V
Sbjct: 1489 QRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDV 1548

Query: 20   KQVRVG 3
            +Q+R G
Sbjct: 1549 RQIRQG 1554


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/105 (56%), Positives = 83/105 (79%)
 Frame = -1

Query: 380  VNLIKAQNIMKTAADTKRRDDSFTIGDWVFVKLQPYRQRSLARRPYEKLAPRFYGPFRVI 201
            ++L+ AQN M+T  D  RR+  F +GD V+++LQPY+QRSLA+R  EKLAPR+YGPF V+
Sbjct: 1198 LHLVTAQNNMRTQEDKHRREMHFGVGDMVYLRLQPYKQRSLAKRLNEKLAPRYYGPFPVL 1257

Query: 200  ECIGRVAYKLELPEQSKVHPVFHVSQLKRSVGTQPFSTVIPPQIS 66
            + IG VAY+L+LP  SK+HPVFH+SQL+++VGT P   V+PP ++
Sbjct: 1258 KRIGTVAYELDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLT 1302


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  121 bits (303), Expect = 7e-26
 Identities = 51/104 (49%), Positives = 82/104 (78%)
 Frame = -1

Query: 377  NLIKAQNIMKTAADTKRRDDSFTIGDWVFVKLQPYRQRSLARRPYEKLAPRFYGPFRVIE 198
            +L++AQ++MK +AD  RR+ SF +GDWV++KL+P+RQ ++ RR  +KLA +++GP+ + E
Sbjct: 2531 HLLRAQHLMKASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISE 2590

Query: 197  CIGRVAYKLELPEQSKVHPVFHVSQLKRSVGTQPFSTVIPPQIS 66
             IG+VAY+L+LP+++++HPVFH+SQLK ++G   F   IPP  S
Sbjct: 2591 RIGKVAYRLKLPDEARIHPVFHISQLKAALGHGQFVQAIPPVCS 2634


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/93 (60%), Positives = 70/93 (75%)
 Frame = -1

Query: 377  NLIKAQNIMKTAADTKRRDDSFTIGDWVFVKLQPYRQRSLARRPYEKLAPRFYGPFRVIE 198
            NL +AQ IMK  AD KRRD  F +GDWV +KLQPYRQR++ RRP  KLA +F+GPF ++E
Sbjct: 1035 NLQRAQEIMKRNADMKRRDVVFAVGDWVHLKLQPYRQRTVVRRPCYKLAAKFFGPFEIVE 1094

Query: 197  CIGRVAYKLELPEQSKVHPVFHVSQLKRSVGTQ 99
             IG VAY++ LP  SK+H VF+VSQLK+  G Q
Sbjct: 1095 RIGNVAYRINLPASSKIHNVFNVSQLKKVFGEQ 1127


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/104 (54%), Positives = 79/104 (75%)
 Frame = -1

Query: 377  NLIKAQNIMKTAADTKRRDDSFTIGDWVFVKLQPYRQRSLARRPYEKLAPRFYGPFRVIE 198
            +L++AQN MK   D  RR   F  G  V++K+QPYR +SLA++  EKLAPRFYGPF V++
Sbjct: 1363 HLLEAQNSMKIQEDKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLAPRFYGPFSVLK 1422

Query: 197  CIGRVAYKLELPEQSKVHPVFHVSQLKRSVGTQPFSTVIPPQIS 66
             IG+VAY+L+LP  +K+HPVFH+SQLK++VG+   S  IPPQ++
Sbjct: 1423 RIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQLT 1466