BLASTX nr result

ID: Cnidium21_contig00048283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048283
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142205.1| PREDICTED: uncharacterized protein LOC101206...    68   9e-10
ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...    65   7e-09
ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...    64   2e-08
emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]    64   2e-08

>ref|XP_004142205.1| PREDICTED: uncharacterized protein LOC101206616 [Cucumis sativus]
           gi|449502619|ref|XP_004161695.1| PREDICTED: LOW QUALITY
           PROTEIN: uncharacterized LOC101206616 [Cucumis sativus]
          Length = 934

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/73 (43%), Positives = 45/73 (61%)
 Frame = -3

Query: 259 VLKEIRSCSFKSSANPPSVLENYDVWMAEPGSIQDRRKRLFQGMGLNSNRDLLAIASTKF 80
           V+   +   F++ A    +   YD+WMA PGSI++RRKRL QGMGLNS +    + S +F
Sbjct: 55  VVSSAKHDEFRTFAMTSPMTPEYDIWMAAPGSIKERRKRLLQGMGLNSGKQFQRLQSREF 114

Query: 79  GRGVSKKIETQRQ 41
            RGVS+K+    Q
Sbjct: 115 QRGVSRKLVNNTQ 127


>ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -3

Query: 208 SVLENYDVWMAEPGSIQDRRKRLFQGMGLNSNRDLLAIASTKFGRGVSKK 59
           SV  +YD+WMA PGSI +RRKRL QGMGLNSN++LL +AS    R V+ K
Sbjct: 87  SVSPDYDIWMAAPGSITERRKRLLQGMGLNSNKELLKMASKGLMRDVTNK 136


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
           gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 939

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = -3

Query: 235 SFKSSANPPSVLENYDVWMAEPGSIQDRRKRLFQGMGLNSNRDLLAIASTKFGRGV 68
           ++ S A   ++  +YDVWMA PGSI +RRKRL QGMGL+++++LL IAS +  RGV
Sbjct: 72  NYASVAAAAAISPDYDVWMAAPGSINERRKRLLQGMGLSADKELLRIASNELTRGV 127


>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = -3

Query: 220 ANPPSVLENYDVWMAEPGSIQDRRKRLFQGMGLNSNRDLLAIASTKFGRGVSKKI 56
           A+  S  ++Y +WMAEPGSIQ+RRKRL QGMGL S ++ + +AS  F R  S K+
Sbjct: 83  ASETSSSDDYGMWMAEPGSIQERRKRLLQGMGLTSEKEFIRLASVGFKRAASTKV 137


>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = -3

Query: 220 ANPPSVLENYDVWMAEPGSIQDRRKRLFQGMGLNSNRDLLAIASTKFGRGVSKKI 56
           A+  S  ++Y +WMAEPGSIQ+RRKRL QGMGL S ++ + +AS  F R  S K+
Sbjct: 87  ASETSSSDDYGMWMAEPGSIQERRKRLLQGMGLTSEKEFIRLASVGFKRAASTKV 141


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